RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 WDR62O43379 1518 aa17.37■□□□□ 0.37
C9orf139-202ENST00000623196 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
C9orf139-202ENST00000623196 CALCOCO1Q9P1Z2 691 aa17.37■□□□□ 0.37
C9orf139-202ENST00000623196 NEMFO60524 1076 aa17.37■□□□□ 0.37
C9orf139-202ENST00000623196 TNNT1P13805 278 aa17.37■□□□□ 0.37
C9orf139-202ENST00000623196 PRPF40BQ6NWY9 871 aaKnown RBP17.37■□□□□ 0.37
C9orf139-202ENST00000623196 CGNQ9P2M7 1197 aaKnown RBP17.37■□□□□ 0.37
C9orf139-202ENST00000623196 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
C9orf139-202ENST00000623196 CTAGE5O15320 804 aa17.36■□□□□ 0.37
C9orf139-202ENST00000623196 MCM5P33992 734 aa17.36■□□□□ 0.37
C9orf139-202ENST00000623196 MCM3P25205 808 aa17.36■□□□□ 0.37
C9orf139-202ENST00000623196 DHX37Q8IY37 1157 aaKnown RBP17.36■□□□□ 0.37
C9orf139-202ENST00000623196 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
C9orf139-202ENST00000623196 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.37
C9orf139-202ENST00000623196 GBP2P32456 591 aaPredicted RBP17.36■□□□□ 0.37
C9orf139-202ENST00000623196 PODXL2Q9NZ53 605 aa17.36■□□□□ 0.37
C9orf139-202ENST00000623196 ABCC11Q96J66 1382 aa17.36■□□□□ 0.37
C9orf139-202ENST00000623196 RAB11FIP3O75154 756 aa17.36■□□□□ 0.37
C9orf139-202ENST00000623196 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
C9orf139-202ENST00000623196 IDI1Q13907 227 aa17.35■□□□□ 0.37
C9orf139-202ENST00000623196 C14orf93Q9H972 538 aaKnown RBP17.35■□□□□ 0.37
C9orf139-202ENST00000623196 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
C9orf139-202ENST00000623196 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
C9orf139-202ENST00000623196 SPG7Q9UQ90 795 aa17.35■□□□□ 0.37
C9orf139-202ENST00000623196 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
C9orf139-202ENST00000623196 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
C9orf139-202ENST00000623196 MEX3CQ5U5Q3 659 aaKnown RBP17.34■□□□□ 0.37
C9orf139-202ENST00000623196 GIMAP7Q8NHV1 300 aa17.34■□□□□ 0.37
C9orf139-202ENST00000623196 DDX54Q8TDD1 881 aaKnown RBP17.34■□□□□ 0.37
C9orf139-202ENST00000623196 AIDAQ96BJ3 306 aa17.34■□□□□ 0.37
C9orf139-202ENST00000623196 CETN2P41208 172 aa17.34■□□□□ 0.37
C9orf139-202ENST00000623196 KLHL10Q6JEL2 608 aa17.34■□□□□ 0.37
C9orf139-202ENST00000623196 DDX19AQ9NUU7 478 aaKnown RBP17.34■□□□□ 0.37
C9orf139-202ENST00000623196 LRP2BPQ9P2M1 347 aa17.34■□□□□ 0.37
C9orf139-202ENST00000623196 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
C9orf139-202ENST00000623196 CASQ1P31415 396 aa17.33■□□□□ 0.37
C9orf139-202ENST00000623196 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.37
C9orf139-202ENST00000623196 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
C9orf139-202ENST00000623196 ADGRL1O94910 1474 aa17.33■□□□□ 0.37
C9orf139-202ENST00000623196 DYDC1Q8WWB3 177 aa17.33■□□□□ 0.37
C9orf139-202ENST00000623196 C16orf45Q96MC5 204 aaPredicted RBP17.33■□□□□ 0.37
C9orf139-202ENST00000623196 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.37
C9orf139-202ENST00000623196 MBIPQ9NS73 344 aa17.33■□□□□ 0.37
C9orf139-202ENST00000623196 RAI14Q9P0K7 980 aa17.33■□□□□ 0.36
C9orf139-202ENST00000623196 FBXO31Q5XUX0 539 aaPredicted RBP17.33■□□□□ 0.36
C9orf139-202ENST00000623196 C8orf76Q96K31 380 aa17.33■□□□□ 0.36
C9orf139-202ENST00000623196 BTBD11A6QL63 1104 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 PPP1R12BO60237 982 aaPredicted RBP17.32■□□□□ 0.36
C9orf139-202ENST00000623196 PAFAH1B1P43034 410 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 FKBP15Q5T1M5 1219 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 CCDC61Q9Y6R9 512 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 GSDMDP57764 484 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 MAP2K1Q02750 393 aaPredicted RBP17.32■□□□□ 0.36
C9orf139-202ENST00000623196 NUCB1Q02818 461 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 HDAC1Q13547 482 aaPredicted RBP17.32■□□□□ 0.36
C9orf139-202ENST00000623196 KDM2BQ8NHM5 1336 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 LUZP1Q86V48 1076 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 GDPD2Q9HCC8 539 aa17.32■□□□□ 0.36
C9orf139-202ENST00000623196 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
C9orf139-202ENST00000623196 RBM27Q9P2N5 1060 aaKnown RBP17.31■□□□□ 0.36
C9orf139-202ENST00000623196 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
C9orf139-202ENST00000623196 ITSN2Q9NZM3 1697 aa17.31■□□□□ 0.36
C9orf139-202ENST00000623196 HMGB1P09429 215 aaKnown RBP17.31■□□□□ 0.36
C9orf139-202ENST00000623196 FAM107BQ9H098 131 aa17.31■□□□□ 0.36
C9orf139-202ENST00000623196 TRMT1Q9NXH9 659 aaKnown RBP17.31■□□□□ 0.36
C9orf139-202ENST00000623196 POLR3GO15318 223 aaPredicted RBP17.31■□□□□ 0.36
C9orf139-202ENST00000623196 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
C9orf139-202ENST00000623196 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
C9orf139-202ENST00000623196 DESP17661 470 aa17.3■□□□□ 0.36
C9orf139-202ENST00000623196 CACNA2D4Q7Z3S7 1137 aa17.3■□□□□ 0.36
C9orf139-202ENST00000623196 VPS36Q86VN1 386 aa17.3■□□□□ 0.36
C9orf139-202ENST00000623196 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
C9orf139-202ENST00000623196 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
C9orf139-202ENST00000623196 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
C9orf139-202ENST00000623196 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
C9orf139-202ENST00000623196 BOLA2Q9H3K6 86 aa17.29■□□□□ 0.36
C9orf139-202ENST00000623196 USO1O60763 962 aaKnown RBP17.29■□□□□ 0.36
C9orf139-202ENST00000623196 CCDC113Q9H0I3 377 aa17.29■□□□□ 0.36
C9orf139-202ENST00000623196 SSR1P43307 286 aaKnown RBP17.29■□□□□ 0.36
C9orf139-202ENST00000623196 ZNF76P36508 570 aa17.29■□□□□ 0.36
C9orf139-202ENST00000623196 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
C9orf139-202ENST00000623196 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
C9orf139-202ENST00000623196 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
C9orf139-202ENST00000623196 PHAXQ9H814 394 aaKnown RBP17.28■□□□□ 0.36
C9orf139-202ENST00000623196 KIAA0556O60303 1618 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 GOLGA6L10A0A0M3HER8 536 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 GNAT3A8MTJ3 354 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 CAVIN2O95810 425 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 POTEJP0CG39 1038 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 CCDC91Q7Z6B0 441 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 UHRF1BP1Q6BDS2 1440 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 ARHGEF12Q9NZN5 1544 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 ABCF2Q9UG63 623 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 AKAP2Q9Y2D5 859 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 ADCY5O95622 1261 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 ZNF165P49910 485 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 IFFO1Q0D2I5 559 aa17.28■□□□□ 0.36
C9orf139-202ENST00000623196 KLHL40Q2TBA0 621 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms