RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 TJP1Q07157 1748 aa11.88□□□□□ -0.51
TARDBP-222ENST00000620505 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
TARDBP-222ENST00000620505 RNMTO43148 476 aaKnown RBP11.87□□□□□ -0.51
TARDBP-222ENST00000620505 DIAPH1O60610 1272 aaKnown RBP11.87□□□□□ -0.51
TARDBP-222ENST00000620505 DDR1Q08345 913 aa11.87□□□□□ -0.51
TARDBP-222ENST00000620505 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
TARDBP-222ENST00000620505 INTS5Q6P9B9 1019 aaKnown RBP11.87□□□□□ -0.51
TARDBP-222ENST00000620505 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
TARDBP-222ENST00000620505 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
TARDBP-222ENST00000620505 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
TARDBP-222ENST00000620505 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
TARDBP-222ENST00000620505 GOLGB1Q14789 3259 aaKnown RBP11.85□□□□□ -0.51
TARDBP-222ENST00000620505 U2SURPO15042 1029 aaKnown RBP11.85□□□□□ -0.51
TARDBP-222ENST00000620505 PER1O15534 1290 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-222ENST00000620505 KCNA3P22001 575 aa11.85□□□□□ -0.51
TARDBP-222ENST00000620505 CHRNA5P30532 468 aa11.85□□□□□ -0.51
TARDBP-222ENST00000620505 USPL1Q5W0Q7 1092 aa11.85□□□□□ -0.51
TARDBP-222ENST00000620505 KIF3CO14782 793 aa11.84□□□□□ -0.51
TARDBP-222ENST00000620505 ZPR1O75312 459 aa11.84□□□□□ -0.51
TARDBP-222ENST00000620505 ZBTB1Q9Y2K1 713 aa11.84□□□□□ -0.51
TARDBP-222ENST00000620505 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
TARDBP-222ENST00000620505 CYP19A1P11511 503 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-222ENST00000620505 HSPA6P17066 643 aa11.83□□□□□ -0.52
TARDBP-222ENST00000620505 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
TARDBP-222ENST00000620505 PIM2Q9P1W9 311 aa11.83□□□□□ -0.52
TARDBP-222ENST00000620505 KCPQ6ZWJ8 1503 aa11.82□□□□□ -0.52
TARDBP-222ENST00000620505 POLRMTO00411 1230 aaKnown RBP11.82□□□□□ -0.52
TARDBP-222ENST00000620505 TM4SF1P30408 202 aa11.82□□□□□ -0.52
TARDBP-222ENST00000620505 DALRD3Q5D0E6 543 aaKnown RBP11.82□□□□□ -0.52
TARDBP-222ENST00000620505 C9orf131Q5VYM1 1079 aa11.82□□□□□ -0.52
TARDBP-222ENST00000620505 NMRK2Q9NPI5 230 aa11.82□□□□□ -0.52
TARDBP-222ENST00000620505 COL15A1P39059 1388 aa11.81□□□□□ -0.52
TARDBP-222ENST00000620505 NFIXQ14938 502 aa11.81□□□□□ -0.52
TARDBP-222ENST00000620505 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
TARDBP-222ENST00000620505 MRC1P22897 1456 aa11.81□□□□□ -0.52
TARDBP-222ENST00000620505 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
TARDBP-222ENST00000620505 TTC5Q8N0Z6 440 aa11.8□□□□□ -0.52
TARDBP-222ENST00000620505 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
TARDBP-222ENST00000620505 NARFQ9UHQ1 456 aa11.8□□□□□ -0.52
TARDBP-222ENST00000620505 ZNF330Q9Y3S2 320 aaPredicted RBP11.8□□□□□ -0.52
TARDBP-222ENST00000620505 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
TARDBP-222ENST00000620505 BRCA1P38398 1863 aaKnown RBP11.79□□□□□ -0.52
TARDBP-222ENST00000620505 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-222ENST00000620505 TEFQ10587 303 aa11.79□□□□□ -0.52
TARDBP-222ENST00000620505 IL17REQ8NFR9 667 aa11.79□□□□□ -0.52
TARDBP-222ENST00000620505 RNF181Q9P0P0 153 aa11.79□□□□□ -0.52
TARDBP-222ENST00000620505 SERPINB2P05120 415 aa11.78□□□□□ -0.52
TARDBP-222ENST00000620505 RASSF7Q02833 373 aa11.78□□□□□ -0.52
TARDBP-222ENST00000620505 CCDC24Q8N4L8 307 aa11.78□□□□□ -0.52
TARDBP-222ENST00000620505 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
TARDBP-222ENST00000620505 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
TARDBP-222ENST00000620505 KCNQ3O43525 872 aa11.77□□□□□ -0.53
TARDBP-222ENST00000620505 TOMM70O94826 608 aa11.77□□□□□ -0.53
TARDBP-222ENST00000620505 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
TARDBP-222ENST00000620505 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.53
TARDBP-222ENST00000620505 PHACTR3Q96KR7 559 aa11.77□□□□□ -0.53
TARDBP-222ENST00000620505 TBC1D2BQ9UPU7 963 aa11.77□□□□□ -0.53
TARDBP-222ENST00000620505 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
TARDBP-222ENST00000620505 STARD3NLO95772 234 aa11.76□□□□□ -0.53
TARDBP-222ENST00000620505 PRKAR2BP31323 418 aa11.76□□□□□ -0.53
TARDBP-222ENST00000620505 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
TARDBP-222ENST00000620505 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
TARDBP-222ENST00000620505 C16orf71Q8IYS4 520 aaPredicted RBP11.76□□□□□ -0.53
TARDBP-222ENST00000620505 RRAGCQ9HB90 399 aa11.76□□□□□ -0.53
TARDBP-222ENST00000620505 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
TARDBP-222ENST00000620505 HEG1Q9ULI3 1381 aa11.76□□□□□ -0.53
TARDBP-222ENST00000620505 UBR2Q8IWV8 1755 aa11.75□□□□□ -0.53
TARDBP-222ENST00000620505 AFDNP55196 1824 aaKnown RBP11.75□□□□□ -0.53
TARDBP-222ENST00000620505 A1BGP04217 495 aa11.75□□□□□ -0.53
TARDBP-222ENST00000620505 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-222ENST00000620505 EIF5P55010 431 aaKnown RBP11.75□□□□□ -0.53
TARDBP-222ENST00000620505 TBC1D9BQ66K14 1250 aa11.75□□□□□ -0.53
TARDBP-222ENST00000620505 HTRA3P83110 453 aa11.74□□□□□ -0.53
TARDBP-222ENST00000620505 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
TARDBP-222ENST00000620505 FMNL2Q96PY5 1086 aa11.74□□□□□ -0.53
TARDBP-222ENST00000620505 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
TARDBP-222ENST00000620505 NPC1L1Q9UHC9 1359 aa11.74□□□□□ -0.53
TARDBP-222ENST00000620505 A0A087WZG4 1122 aa11.73□□□□□ -0.53
TARDBP-222ENST00000620505 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
TARDBP-222ENST00000620505 BTBD11A6QL63 1104 aa11.73□□□□□ -0.53
TARDBP-222ENST00000620505 H0YIN7 160 aa11.73□□□□□ -0.53
TARDBP-222ENST00000620505 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-222ENST00000620505 APLP1P51693 650 aa11.73□□□□□ -0.53
TARDBP-222ENST00000620505 PRELPP51888 382 aa11.73□□□□□ -0.53
TARDBP-222ENST00000620505 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
TARDBP-222ENST00000620505 TTLL6Q8N841 843 aa11.73□□□□□ -0.53
TARDBP-222ENST00000620505 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
TARDBP-222ENST00000620505 ZNF622Q969S3 477 aaKnown RBP eCLIP11.73□□□□□ -0.53
TARDBP-222ENST00000620505 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
TARDBP-222ENST00000620505 PPP2R1AP30153 589 aa11.72□□□□□ -0.53
TARDBP-222ENST00000620505 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
TARDBP-222ENST00000620505 MCM10Q7L590 875 aa11.72□□□□□ -0.53
TARDBP-222ENST00000620505 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-222ENST00000620505 NPHP1O15259 732 aa11.71□□□□□ -0.53
TARDBP-222ENST00000620505 IL6STP40189 918 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-222ENST00000620505 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
TARDBP-222ENST00000620505 NPM2Q86SE8 214 aaKnown RBP11.71□□□□□ -0.53
TARDBP-222ENST00000620505 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.53
TARDBP-222ENST00000620505 NUDCQ9Y266 331 aa11.71□□□□□ -0.53
TARDBP-222ENST00000620505 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms