RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 CLIP2Q9UDT6 1046 aa5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 USH1CQ9Y6N9 552 aa5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 KDM6BO15054 1643 aa5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 NPC1L1Q9UHC9 1359 aa5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 CCT4P50991 539 aaKnown RBP5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 MRPS9P82933 396 aaKnown RBP5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 TESK2Q96S53 571 aa5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 PPP1R9BQ96SB3 815 aa5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 MPHOSPH8Q99549 860 aa5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.56□□□□□ -1.522e-6■□□□□ 8.6
ATP13A3-211ENST00000619199 ZNF644Q9H582 1327 aaPredicted RBP5.56□□□□□ -1.52
ATP13A3-211ENST00000619199 TDRD9Q8NDG6 1382 aaKnown RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 IBTKQ9P2D0 1353 aaPredicted RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 APAF1O14727 1248 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 KIF5CO60282 957 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 NEMFO60524 1076 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 SEC24BO95487 1268 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 SSBP05455 408 aaKnown RBP eCLIP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 ATP2B1P20020 1258 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 FILIP1Q7Z7B0 1213 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 EHBP1Q8NDI1 1231 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 TIGD1Q96MW7 591 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 ZNF652Q9Y2D9 606 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 COG6Q9Y2V7 657 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 TOPBP1Q92547 1522 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 PPP2R1AP30153 589 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 MCM5P33992 734 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 RBM5P52756 815 aaKnown RBP eCLIP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 AMPD3Q01432 767 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 CCDC117Q8IWD4 279 aaPredicted RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 RGS22Q8NE09 1264 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 TTC14Q96N46 770 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 SPG7Q9UQ90 795 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 ELL2O00472 640 aaPredicted RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 NDC80O14777 642 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 ME1P48163 572 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 MAP7Q14244 749 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 CACNA2D4Q7Z3S7 1137 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 ZSCAN29Q8IWY8 852 aaPredicted RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 CCDC77Q9BR77 488 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 DNMT1P26358 1616 aaKnown RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 IGHDP01880 384 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 ARID4AP29374 1257 aaPredicted RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 TICAM2Q86XR7 235 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 PPP1R14CQ8TAE6 165 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 GABPB2Q8TAK5 448 aaPredicted RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 FMNL2Q96PY5 1086 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 UTP14AQ9BVJ6 771 aaKnown RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 UPF3BQ9BZI7 483 aaKnown RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 MTMR7Q9Y216 660 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 NOC2LQ9Y3T9 749 aaKnown RBP5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 ADGRL2O95490 1459 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 MAGI3Q5TCQ9 1506 aa5.55□□□□□ -1.52
ATP13A3-211ENST00000619199 OPA1O60313 960 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 GNAI2P04899 355 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 APBB1IPQ7Z5R6 666 aaPredicted RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 RAB3IPQ96QF0 476 aaPredicted RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 GMNNO75496 209 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 SURF6O75683 361 aaKnown RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 IGHMBP2P38935 993 aaKnown RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 RBM25P49756 843 aaKnown RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 FMNL3Q8IVF7 1028 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 CCDC155Q8N6L0 562 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 SNX21Q969T3 373 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 SPATA32Q96LK8 384 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 CALCOCO1Q9P1Z2 691 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 PIK3C2GO75747 1445 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 CTAGE5O15320 804 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 SETSIPP0DME0 302 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 FOSBP53539 338 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 CKAP4Q07065 602 aaKnown RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 FBF1Q8TES7 1133 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 PDZRN3Q9UPQ7 1066 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 COL17A1Q9UMD9 1497 aaPredicted RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 TROQ12816 1431 aaPredicted RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 ATP2A1O14983 1001 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 ALDH3A1P30838 453 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 MAP7D1Q3KQU3 841 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 CEP128Q6ZU80 1094 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 SMAP1Q8IYB5 467 aaPredicted RBP5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 MSANTD4Q8NCY6 345 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 AKAP2Q9Y2D5 859 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 KIF21AQ7Z4S6 1674 aa5.54□□□□□ -1.52
ATP13A3-211ENST00000619199 BCAR3O75815 825 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 YEATS4O95619 227 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 TDO2P48775 406 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 SNX16P57768 344 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 TUBB4BP68371 445 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 CCDC178Q5BJE1 867 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 SMC5Q8IY18 1101 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 NAP1L3Q99457 506 aaPredicted RBP5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 A0A087WZG4 1122 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 EIF3DO15371 548 aaKnown RBP eCLIP5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 SMC6Q96SB8 1091 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 IQCGQ9H095 443 aaKnown RBP5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 RNF41Q9H4P4 317 aaPredicted RBP5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 SWAP70Q9UH65 585 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 LMAN1P49257 510 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 KIF5AQ12840 1032 aa5.53□□□□□ -1.52
ATP13A3-211ENST00000619199 AIMP1Q12904 312 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms