RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
SHANK2-221ENST00000618363 TJP1Q07157 1748 aa15.48■□□□□ 0.07
SHANK2-221ENST00000618363 SRP68Q9UHB9 627 aaKnown RBP15.48■□□□□ 0.07
SHANK2-221ENST00000618363 ZBTB1Q9Y2K1 713 aa15.48■□□□□ 0.07
SHANK2-221ENST00000618363 ZNF330Q9Y3S2 320 aaPredicted RBP15.48■□□□□ 0.07
SHANK2-221ENST00000618363 CHD4Q14839 1912 aa15.48■□□□□ 0.07
SHANK2-221ENST00000618363 CEMIPQ8WUJ3 1361 aa15.48■□□□□ 0.07
SHANK2-221ENST00000618363 HEG1Q9ULI3 1381 aa15.48■□□□□ 0.07
SHANK2-221ENST00000618363 SOS1Q07889 1333 aaPredicted RBP15.47■□□□□ 0.07
SHANK2-221ENST00000618363 TGFB2P61812 414 aa15.47■□□□□ 0.07
SHANK2-221ENST00000618363 USPL1Q5W0Q7 1092 aa15.47■□□□□ 0.07
SHANK2-221ENST00000618363 KCPQ6ZWJ8 1503 aa15.47■□□□□ 0.07
SHANK2-221ENST00000618363 CICQ96RK0 1608 aaPredicted RBP15.46■□□□□ 0.07
SHANK2-221ENST00000618363 YBX3P16989 372 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHANK2-221ENST00000618363 FKBP8Q14318 412 aa15.46■□□□□ 0.07
SHANK2-221ENST00000618363 NARFQ9UHQ1 456 aa15.46■□□□□ 0.07
SHANK2-221ENST00000618363 COL15A1P39059 1388 aa15.46■□□□□ 0.07
SHANK2-221ENST00000618363 MYBBP1AQ9BQG0 1328 aaKnown RBP15.45■□□□□ 0.06
SHANK2-221ENST00000618363 DCTN1Q14203 1278 aa15.45■□□□□ 0.06
SHANK2-221ENST00000618363 TAF7Q15545 349 aaPredicted RBP15.45■□□□□ 0.06
SHANK2-221ENST00000618363 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
SHANK2-221ENST00000618363 WWC3Q9ULE0 1092 aa15.45■□□□□ 0.06
SHANK2-221ENST00000618363 SNRPA1P09661 255 aaKnown RBP15.44■□□□□ 0.06
SHANK2-221ENST00000618363 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHANK2-221ENST00000618363 NFE2L2Q16236 605 aa15.44■□□□□ 0.06
SHANK2-221ENST00000618363 C4AP0C0L4 1744 aa15.43■□□□□ 0.06
SHANK2-221ENST00000618363 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
SHANK2-221ENST00000618363 ZNF784Q8NCA9 323 aaPredicted RBP15.43■□□□□ 0.06
SHANK2-221ENST00000618363 UBR2Q8IWV8 1755 aa15.43■□□□□ 0.06
SHANK2-221ENST00000618363 A0A0G2JLW4 131 aa15.42■□□□□ 0.06
SHANK2-221ENST00000618363 KCNQ3O43525 872 aa15.42■□□□□ 0.06
SHANK2-221ENST00000618363 EIF5P55010 431 aaKnown RBP15.42■□□□□ 0.06
SHANK2-221ENST00000618363 PLEKHF1Q96S99 279 aa15.42■□□□□ 0.06
SHANK2-221ENST00000618363 BCS1LQ9Y276 419 aa15.42■□□□□ 0.06
SHANK2-221ENST00000618363 SIPA1L3O60292 1781 aaPredicted RBP15.41■□□□□ 0.06
SHANK2-221ENST00000618363 NPHP1O15259 732 aa15.41■□□□□ 0.06
SHANK2-221ENST00000618363 A1BGP04217 495 aa15.41■□□□□ 0.06
SHANK2-221ENST00000618363 TM4SF1P30408 202 aa15.41■□□□□ 0.06
SHANK2-221ENST00000618363 LMOD3Q0VAK6 560 aa15.41■□□□□ 0.06
SHANK2-221ENST00000618363 C10orf71Q711Q0 1435 aa15.41■□□□□ 0.06
SHANK2-221ENST00000618363 POLRMTO00411 1230 aaKnown RBP15.4■□□□□ 0.06
SHANK2-221ENST00000618363 DPEP1P16444 411 aa15.4■□□□□ 0.06
SHANK2-221ENST00000618363 RIPK4P57078 832 aa15.4■□□□□ 0.06
SHANK2-221ENST00000618363 DDR1Q08345 913 aa15.4■□□□□ 0.06
SHANK2-221ENST00000618363 NFIXQ14938 502 aa15.4■□□□□ 0.06
SHANK2-221ENST00000618363 BICDL1Q6ZP65 573 aa15.4■□□□□ 0.06
SHANK2-221ENST00000618363 PIM2Q9P1W9 311 aa15.4■□□□□ 0.06
SHANK2-221ENST00000618363 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
SHANK2-221ENST00000618363 MIS18AQ9NYP9 233 aa15.39■□□□□ 0.05
SHANK2-221ENST00000618363 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
SHANK2-221ENST00000618363 SERPINB2P05120 415 aa15.38■□□□□ 0.05
SHANK2-221ENST00000618363 DZIP3Q86Y13 1208 aaKnown RBP15.38■□□□□ 0.05
SHANK2-221ENST00000618363 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
SHANK2-221ENST00000618363 PXDNLA1KZ92 1463 aa15.38■□□□□ 0.05
SHANK2-221ENST00000618363 DALRD3Q5D0E6 543 aaKnown RBP15.37■□□□□ 0.05
SHANK2-221ENST00000618363 ARHGAP27Q6ZUM4 889 aa15.37■□□□□ 0.05
SHANK2-221ENST00000618363 SETDB2Q96T68 719 aa15.37■□□□□ 0.05
SHANK2-221ENST00000618363 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
SHANK2-221ENST00000618363 KIF13BQ9NQT8 1826 aa15.36■□□□□ 0.05
SHANK2-221ENST00000618363 THUMPD2Q9BTF0 503 aaKnown RBP15.36■□□□□ 0.05
SHANK2-221ENST00000618363 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
SHANK2-221ENST00000618363 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
SHANK2-221ENST00000618363 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
SHANK2-221ENST00000618363 DLG5Q8TDM6 1919 aa15.35■□□□□ 0.05
SHANK2-221ENST00000618363 N4BP2Q86UW6 1770 aaPredicted RBP15.35■□□□□ 0.05
SHANK2-221ENST00000618363 PRAMEF22A3QJZ6 481 aa15.35■□□□□ 0.05
SHANK2-221ENST00000618363 TMPOP42166 694 aaKnown RBP15.35■□□□□ 0.05
SHANK2-221ENST00000618363 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
SHANK2-221ENST00000618363 CCDC146Q8IYE0 955 aa15.35■□□□□ 0.05
SHANK2-221ENST00000618363 RUNDC1Q96C34 613 aa15.35■□□□□ 0.05
SHANK2-221ENST00000618363 H0YIN7 160 aa15.34■□□□□ 0.05
SHANK2-221ENST00000618363 CHRNA5P30532 468 aa15.34■□□□□ 0.05
SHANK2-221ENST00000618363 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
SHANK2-221ENST00000618363 TBC1D9BQ66K14 1250 aa15.34■□□□□ 0.05
SHANK2-221ENST00000618363 PDZRN3Q9UPQ7 1066 aa15.34■□□□□ 0.05
SHANK2-221ENST00000618363 ST5P78524 1137 aa15.33■□□□□ 0.04
SHANK2-221ENST00000618363 CLEC4GQ6UXB4 293 aa15.33■□□□□ 0.04
SHANK2-221ENST00000618363 CARMIL3Q8ND23 1372 aa15.33■□□□□ 0.04
SHANK2-221ENST00000618363 GIGYF1O75420 1035 aaPredicted RBP15.32■□□□□ 0.04
SHANK2-221ENST00000618363 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
SHANK2-221ENST00000618363 PDE6BP35913 854 aa15.32■□□□□ 0.04
SHANK2-221ENST00000618363 EIF4A1P60842 406 aaKnown RBP15.32■□□□□ 0.04
SHANK2-221ENST00000618363 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
SHANK2-221ENST00000618363 NGEFQ8N5V2 710 aa15.32■□□□□ 0.04
SHANK2-221ENST00000618363 CNBD1Q8NA66 436 aa15.32■□□□□ 0.04
SHANK2-221ENST00000618363 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
SHANK2-221ENST00000618363 BABAM1Q9NWV8 329 aa15.32■□□□□ 0.04
SHANK2-221ENST00000618363 ADAMTS8Q9UP79 889 aa15.32■□□□□ 0.04
SHANK2-221ENST00000618363 RRP7AQ9Y3A4 280 aaKnown RBP15.32■□□□□ 0.04
SHANK2-221ENST00000618363 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
SHANK2-221ENST00000618363 KCNA3P22001 575 aa15.31■□□□□ 0.04
SHANK2-221ENST00000618363 KIF6Q6ZMV9 814 aa15.31■□□□□ 0.04
SHANK2-221ENST00000618363 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
SHANK2-221ENST00000618363 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
SHANK2-221ENST00000618363 UTRNP46939 3433 aa15.3■□□□□ 0.04
SHANK2-221ENST00000618363 NBPF5PQ86XG9 351 aaPredicted RBP15.3■□□□□ 0.04
SHANK2-221ENST00000618363 TTLL6Q8N841 843 aa15.3■□□□□ 0.04
SHANK2-221ENST00000618363 ZNF622Q969S3 477 aaKnown RBP eCLIP15.3■□□□□ 0.04
SHANK2-221ENST00000618363 BRIP1Q9BX63 1249 aa15.3■□□□□ 0.04
SHANK2-221ENST00000618363 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms