RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 MAP3K2Q9Y2U5 619 aa18.84■□□□□ 0.61
CBX5-206ENST00000618078 PDIA6Q15084 440 aa18.83■□□□□ 0.61
CBX5-206ENST00000618078 AIMP1Q12904 312 aaKnown RBP18.82■□□□□ 0.6
CBX5-206ENST00000618078 LARP1Q6PKG0 1096 aaKnown RBP18.82■□□□□ 0.6
CBX5-206ENST00000618078 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
CBX5-206ENST00000618078 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
CBX5-206ENST00000618078 PIP4K2AP48426 406 aaPredicted RBP18.8■□□□□ 0.6
CBX5-206ENST00000618078 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
CBX5-206ENST00000618078 KSR2Q6VAB6 950 aa18.8■□□□□ 0.6
CBX5-206ENST00000618078 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
CBX5-206ENST00000618078 IBTKQ9P2D0 1353 aaPredicted RBP18.8■□□□□ 0.6
CBX5-206ENST00000618078 CDC45O75419 566 aa18.8■□□□□ 0.6
CBX5-206ENST00000618078 MYL6BP14649 208 aa18.8■□□□□ 0.6
CBX5-206ENST00000618078 CABP4P57796 275 aa18.8■□□□□ 0.6
CBX5-206ENST00000618078 CWF19L2Q2TBE0 894 aaKnown RBP18.8■□□□□ 0.6
CBX5-206ENST00000618078 ZCRB1Q8TBF4 217 aaKnown RBP18.8■□□□□ 0.6
CBX5-206ENST00000618078 HYPKQ9NX55 129 aa18.8■□□□□ 0.6
CBX5-206ENST00000618078 SHANK3Q9BYB0 1731 aa18.79■□□□□ 0.6
CBX5-206ENST00000618078 TBC1D2Q9BYX2 928 aa18.79■□□□□ 0.6
CBX5-206ENST00000618078 USP16Q9Y5T5 823 aa18.79■□□□□ 0.6
CBX5-206ENST00000618078 GLI3P10071 1580 aa18.79■□□□□ 0.6
CBX5-206ENST00000618078 HSP90AB1P08238 724 aaKnown RBP18.78■□□□□ 0.6
CBX5-206ENST00000618078 TTC5Q8N0Z6 440 aa18.78■□□□□ 0.6
CBX5-206ENST00000618078 SSH3Q8TE77 659 aa18.78■□□□□ 0.6
CBX5-206ENST00000618078 LRRCC1Q9C099 1032 aa18.78■□□□□ 0.6
CBX5-206ENST00000618078 SDSP20132 328 aa18.78■□□□□ 0.6
CBX5-206ENST00000618078 BECN1Q14457 450 aa18.78■□□□□ 0.6
CBX5-206ENST00000618078 CARD10Q9BWT7 1032 aa18.78■□□□□ 0.6
CBX5-206ENST00000618078 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
CBX5-206ENST00000618078 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
CBX5-206ENST00000618078 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
CBX5-206ENST00000618078 PDE1AP54750 535 aa18.77■□□□□ 0.6
CBX5-206ENST00000618078 SALL3Q9BXA9 1300 aa18.77■□□□□ 0.59
CBX5-206ENST00000618078 SRGAP3O43295 1099 aa18.76■□□□□ 0.59
CBX5-206ENST00000618078 IL2RBP14784 551 aa18.76■□□□□ 0.59
CBX5-206ENST00000618078 EVA1CP58658 441 aa18.76■□□□□ 0.59
CBX5-206ENST00000618078 POLA2Q14181 598 aa18.76■□□□□ 0.59
CBX5-206ENST00000618078 ROBO1Q9Y6N7 1651 aa18.76■□□□□ 0.59
CBX5-206ENST00000618078 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
CBX5-206ENST00000618078 SNRPA1P09661 255 aaKnown RBP18.75■□□□□ 0.59
CBX5-206ENST00000618078 DDX54Q8TDD1 881 aaKnown RBP18.75■□□□□ 0.59
CBX5-206ENST00000618078 XAGE3Q8WTP9 111 aa18.75■□□□□ 0.59
CBX5-206ENST00000618078 FMNL2Q96PY5 1086 aa18.75■□□□□ 0.59
CBX5-206ENST00000618078 IL1RAPL2Q9NP60 686 aa18.75■□□□□ 0.59
CBX5-206ENST00000618078 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
CBX5-206ENST00000618078 ALDH1L1O75891 902 aa18.74■□□□□ 0.59
CBX5-206ENST00000618078 SURF6O75683 361 aaKnown RBP18.74■□□□□ 0.59
CBX5-206ENST00000618078 COPS6Q7L5N1 327 aa18.74■□□□□ 0.59
CBX5-206ENST00000618078 LRP10Q7Z4F1 713 aa18.74■□□□□ 0.59
CBX5-206ENST00000618078 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
CBX5-206ENST00000618078 C9orf78Q9NZ63 289 aaPredicted RBP18.74■□□□□ 0.59
CBX5-206ENST00000618078 OSBPL3Q9H4L5 887 aa18.73■□□□□ 0.59
CBX5-206ENST00000618078 DDX58O95786 925 aaKnown RBP18.73■□□□□ 0.59
CBX5-206ENST00000618078 RIC3Q7Z5B4 369 aa18.73■□□□□ 0.59
CBX5-206ENST00000618078 BTG4Q9NY30 223 aa18.73■□□□□ 0.59
CBX5-206ENST00000618078 IGKV5-2P06315 115 aa18.72■□□□□ 0.59
CBX5-206ENST00000618078 LINS1Q8NG48 757 aa18.72■□□□□ 0.59
CBX5-206ENST00000618078 KIF2CQ99661 725 aa18.72■□□□□ 0.59
CBX5-206ENST00000618078 LAMB4A4D0S4 1761 aa18.72■□□□□ 0.59
CBX5-206ENST00000618078 MX1P20591 662 aa18.72■□□□□ 0.59
CBX5-206ENST00000618078 TOGARAM1Q9Y4F4 1720 aa18.72■□□□□ 0.59
CBX5-206ENST00000618078 SPRYD3Q8NCJ5 442 aa18.71■□□□□ 0.59
CBX5-206ENST00000618078 SUCLG2Q96I99 432 aa18.7■□□□□ 0.58
CBX5-206ENST00000618078 UBR2Q8IWV8 1755 aa18.7■□□□□ 0.58
CBX5-206ENST00000618078 GRM8O00222 908 aa18.7■□□□□ 0.58
CBX5-206ENST00000618078 NUTM1Q86Y26 1132 aa18.7■□□□□ 0.58
CBX5-206ENST00000618078 KAZALD1Q96I82 304 aa18.7■□□□□ 0.58
CBX5-206ENST00000618078 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
CBX5-206ENST00000618078 RHPN1Q8TCX5 695 aa18.7■□□□□ 0.58
CBX5-206ENST00000618078 MYD88Q99836 296 aa18.7■□□□□ 0.58
CBX5-206ENST00000618078 RTL5Q5HYW3 569 aaPredicted RBP18.69■□□□□ 0.58
CBX5-206ENST00000618078 PAPPAQ13219 1627 aa18.69■□□□□ 0.58
CBX5-206ENST00000618078 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
CBX5-206ENST00000618078 ERVV-2B6SEH9 535 aa18.69■□□□□ 0.58
CBX5-206ENST00000618078 NFKBIBQ15653 356 aa18.69■□□□□ 0.58
CBX5-206ENST00000618078 PA2G4Q9UQ80 394 aaKnown RBP18.69■□□□□ 0.58
CBX5-206ENST00000618078 MTX1Q13505 466 aa18.68■□□□□ 0.58
CBX5-206ENST00000618078 RBM42Q9BTD8 480 aaKnown RBP18.68■□□□□ 0.58
CBX5-206ENST00000618078 ARFGEF2Q9Y6D5 1785 aa18.68■□□□□ 0.58
CBX5-206ENST00000618078 COL16A1Q07092 1604 aaPredicted RBP18.68■□□□□ 0.58
CBX5-206ENST00000618078 NEURL1BA8MQ27 555 aa18.68■□□□□ 0.58
CBX5-206ENST00000618078 PTCD1O75127 700 aaKnown RBP18.68■□□□□ 0.58
CBX5-206ENST00000618078 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 RAB11FIP3O75154 756 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 NBPF14Q5TI25 921 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
CBX5-206ENST00000618078 ANKRD13DQ6ZTN6 518 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 JARID2Q92833 1246 aaPredicted RBP18.67■□□□□ 0.58
CBX5-206ENST00000618078 METTL22Q9BUU2 404 aaPredicted RBP18.67■□□□□ 0.58
CBX5-206ENST00000618078 BICC1Q9H694 974 aaKnown RBP18.67■□□□□ 0.58
CBX5-206ENST00000618078 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
CBX5-206ENST00000618078 UTYO14607 1347 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
CBX5-206ENST00000618078 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 ANTXR1Q9H6X2 564 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 STAP2Q9UGK3 403 aa18.67■□□□□ 0.58
CBX5-206ENST00000618078 UNC5CLQ8IV45 518 aa18.66■□□□□ 0.58
CBX5-206ENST00000618078 COL14A1Q05707 1796 aaKnown RBP18.66■□□□□ 0.58
CBX5-206ENST00000618078 KIF1BPQ96EK5 621 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms