RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 TOPAZ1Q8N9V7 1692 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 RGPD2P0DJD1 1756 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 CT47B1P0C2W7 299 aaPredicted RBP6.77□□□□□ -1.33
CPNE4-214ENST00000617767 OTUD7AQ8TE49 926 aaPredicted RBP6.77□□□□□ -1.33
CPNE4-214ENST00000617767 TRERF1Q96PN7 1200 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 SSH2Q76I76 1423 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 NRKQ7Z2Y5 1582 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 USP31Q70CQ4 1352 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 GAS2L2Q8NHY3 880 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 ANKRD24Q8TF21 1146 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 IGSF1Q8N6C5 1336 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 MSH6P52701 1360 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 TRAK2O60296 914 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 SLC39A6Q13433 755 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 STK31Q9BXU1 1019 aa6.77□□□□□ -1.33
CPNE4-214ENST00000617767 TMEM94Q12767 1356 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 CHD2O14647 1828 aaKnown RBP6.76□□□□□ -1.33
CPNE4-214ENST00000617767 A0A0G2JS52 829 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 TEFQ10587 303 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 AIMP1Q12904 312 aaKnown RBP6.76□□□□□ -1.33
CPNE4-214ENST00000617767 BECN1Q14457 450 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 XRN1Q8IZH2 1706 aaKnown RBP6.76□□□□□ -1.33
CPNE4-214ENST00000617767 FMN2Q9NZ56 1722 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 CLSTN1O94985 981 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 TIGD1Q96MW7 591 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 FOXD4L1Q9NU39 408 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 EXOC6BQ9Y2D4 811 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 SH3BP1Q9Y3L3 701 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 LTN1O94822 1766 aa6.76□□□□□ -1.33
CPNE4-214ENST00000617767 HDGFL1Q5TGJ6 251 aa6.75□□□□□ -1.33
CPNE4-214ENST00000617767 CHD1LQ86WJ1 897 aa6.75□□□□□ -1.33
CPNE4-214ENST00000617767 ZNF526Q8TF50 670 aaPredicted RBP6.75□□□□□ -1.33
CPNE4-214ENST00000617767 IP6K1Q92551 441 aa6.75□□□□□ -1.33
CPNE4-214ENST00000617767 MCM4P33991 863 aa6.75□□□□□ -1.33
CPNE4-214ENST00000617767 SASS6Q6UVJ0 657 aa6.75□□□□□ -1.33
CPNE4-214ENST00000617767 API5Q9BZZ5 524 aaKnown RBP6.75□□□□□ -1.33
CPNE4-214ENST00000617767 C19orf44Q9H6X5 657 aa6.75□□□□□ -1.33
CPNE4-214ENST00000617767 CT47A1Q5JQC4 288 aaPredicted RBP6.75□□□□□ -1.33
CPNE4-214ENST00000617767 UPF2Q9HAU5 1272 aaKnown RBP6.75□□□□□ -1.33
CPNE4-214ENST00000617767 PIK3R4Q99570 1358 aa6.75□□□□□ -1.33
CPNE4-214ENST00000617767 ADGRL3Q9HAR2 1447 aa6.75□□□□□ -1.33
CPNE4-214ENST00000617767 BTBD11A6QL63 1104 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 TNNT3P45378 269 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-214ENST00000617767 C1orf141Q5JVX7 400 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 GAS2L3Q86XJ1 694 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 ZNF710Q8N1W2 664 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 STRN4Q9NRL3 753 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 CHPF2Q9P2E5 772 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 ARHGEF10O15013 1369 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 FLIIQ13045 1269 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 TAF7Q15545 349 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-214ENST00000617767 USP19O94966 1318 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 ZNF335Q9H4Z2 1342 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-214ENST00000617767 CRB1P82279 1406 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 FAM177BA6PVY3 158 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 HDAC1Q13547 482 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-214ENST00000617767 ABCC4O15439 1325 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 MAP3K5Q99683 1374 aa6.74□□□□□ -1.33
CPNE4-214ENST00000617767 MYL6BP14649 208 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 TMX1Q9H3N1 280 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 ZNF330Q9Y3S2 320 aaPredicted RBP6.73□□□□□ -1.33
CPNE4-214ENST00000617767 RGPD5Q99666 1765 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 CCDC66A2RUB6 948 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 ADAMTSL3P82987 1691 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 NUCB1Q02818 461 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 CCDC173Q0VFZ6 552 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 PROSER3Q2NL68 480 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 SMC5Q8IY18 1101 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 KCNH5Q8NCM2 988 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 MAP4K4O95819 1239 aaPredicted RBP6.73□□□□□ -1.33
CPNE4-214ENST00000617767 ARHGEF25Q86VW2 580 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 IL1RAPL2Q9NP60 686 aa6.73□□□□□ -1.33
CPNE4-214ENST00000617767 ANKARQ7Z5J8 1434 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 GOLIM4O00461 696 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 CCDC30Q5VVM6 783 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 LRRFIP2Q9Y608 721 aaKnown RBP6.72□□□□□ -1.33
CPNE4-214ENST00000617767 PNMA6EA0A0J9YXQ4 647 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 PI4KAP2A4QPH2 592 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 TULP2O00295 520 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 PI4KAP1Q8N8J0 262 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 NFATC2IPQ8NCF5 419 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 RAPGEF4Q8WZA2 1011 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 KIF3AQ9Y496 699 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 KDRP35968 1356 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 TNNT1P13805 278 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 PLEKHO1Q53GL0 409 aaPredicted RBP6.72□□□□□ -1.33
CPNE4-214ENST00000617767 CEP85Q6P2H3 762 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 DDX54Q8TDD1 881 aaKnown RBP6.72□□□□□ -1.33
CPNE4-214ENST00000617767 RBM42Q9BTD8 480 aaKnown RBP6.72□□□□□ -1.33
CPNE4-214ENST00000617767 C22orf23Q9BZE7 217 aa6.72□□□□□ -1.33
CPNE4-214ENST00000617767 EP400Q96L91 3159 aa6.71□□□□□ -1.33
CPNE4-214ENST00000617767 ZNF500O60304 480 aaPredicted RBP6.71□□□□□ -1.33
CPNE4-214ENST00000617767 U2AF2P26368 475 aaKnown RBP eCLIP6.71□□□□□ -1.33
CPNE4-214ENST00000617767 GTF2A1P52655 376 aaPredicted RBP6.71□□□□□ -1.33
CPNE4-214ENST00000617767 ARHGAP45Q92619 1136 aa6.71□□□□□ -1.33
CPNE4-214ENST00000617767 ANTXR1Q9H6X2 564 aa6.71□□□□□ -1.33
CPNE4-214ENST00000617767 MARF1Q9Y4F3 1742 aaKnown RBP6.71□□□□□ -1.34
CPNE4-214ENST00000617767 PXDNQ92626 1479 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms