RNA–Protein interactions for RNA: ENST00000617138.4

MDK-213, Transcript of midkine, humanhuman

TSL 2 BASIC

Gene MDK, Length 635 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-213ENST00000617138 C10orf71Q711Q0 1435 aa27.77■■■□□ 2.04
MDK-213ENST00000617138 COL15A1P39059 1388 aa27.77■■■□□ 2.04
MDK-213ENST00000617138 NPM2Q86SE8 214 aaKnown RBP27.76■■■□□ 2.03
MDK-213ENST00000617138 USPL1Q5W0Q7 1092 aa27.75■■■□□ 2.03
MDK-213ENST00000617138 CANXP27824 592 aaKnown RBP27.74■■■□□ 2.03
MDK-213ENST00000617138 TM4SF1P30408 202 aa27.74■■■□□ 2.03
MDK-213ENST00000617138 EIF5P55010 431 aaKnown RBP27.73■■■□□ 2.03
MDK-213ENST00000617138 C4AP0C0L4 1744 aa27.72■■■□□ 2.03
MDK-213ENST00000617138 PXDNLA1KZ92 1463 aa27.72■■■□□ 2.03
MDK-213ENST00000617138 IL6STP40189 918 aaPredicted RBP27.72■■■□□ 2.03
MDK-213ENST00000617138 MCM10Q7L590 875 aa27.72■■■□□ 2.03
MDK-213ENST00000617138 UBR2Q8IWV8 1755 aa27.72■■■□□ 2.03
MDK-213ENST00000617138 DDX10Q13206 875 aaKnown RBP27.71■■■□□ 2.03
MDK-213ENST00000617138 VIRMAQ69YN4 1812 aaKnown RBP27.7■■■□□ 2.02
MDK-213ENST00000617138 A0A0G2JLW4 131 aa27.7■■■□□ 2.02
MDK-213ENST00000617138 POLRMTO00411 1230 aaKnown RBP27.7■■■□□ 2.02
MDK-213ENST00000617138 DDR1Q08345 913 aa27.7■■■□□ 2.02
MDK-213ENST00000617138 TAF7Q15545 349 aaPredicted RBP27.7■■■□□ 2.02
MDK-213ENST00000617138 MAPK8IP3Q9UPT6 1336 aa27.69■■■□□ 2.02
MDK-213ENST00000617138 SNRPA1P09661 255 aaKnown RBP27.69■■■□□ 2.02
MDK-213ENST00000617138 PNISRQ8TF01 805 aaKnown RBP27.69■■■□□ 2.02
MDK-213ENST00000617138 DPEP1P16444 411 aa27.68■■■□□ 2.02
MDK-213ENST00000617138 PLEKHF1Q96S99 279 aa27.68■■■□□ 2.02
MDK-213ENST00000617138 NFIXQ14938 502 aa27.66■■■□□ 2.02
MDK-213ENST00000617138 NFE2L2Q16236 605 aa27.66■■■□□ 2.02
MDK-213ENST00000617138 PIM2Q9P1W9 311 aa27.66■■■□□ 2.02
MDK-213ENST00000617138 BCS1LQ9Y276 419 aa27.66■■■□□ 2.02
MDK-213ENST00000617138 KIF13BQ9NQT8 1826 aa27.66■■■□□ 2.02
MDK-213ENST00000617138 SIPA1L3O60292 1781 aaPredicted RBP27.65■■■□□ 2.02
MDK-213ENST00000617138 KCNQ3O43525 872 aa27.65■■■□□ 2.02
MDK-213ENST00000617138 WWC3Q9ULE0 1092 aa27.65■■■□□ 2.02
MDK-213ENST00000617138 MYBBP1AQ9BQG0 1328 aaKnown RBP27.65■■■□□ 2.02
MDK-213ENST00000617138 DCTN1Q14203 1278 aa27.64■■■□□ 2.02
MDK-213ENST00000617138 BCL2L12Q9HB09 334 aa27.63■■■□□ 2.01
MDK-213ENST00000617138 ZNF330Q9Y3S2 320 aaPredicted RBP27.63■■■□□ 2.01
MDK-213ENST00000617138 A1BGP04217 495 aa27.62■■■□□ 2.01
MDK-213ENST00000617138 SERPINB2P05120 415 aa27.62■■■□□ 2.01
MDK-213ENST00000617138 KCNA3P22001 575 aa27.61■■■□□ 2.01
MDK-213ENST00000617138 DALRD3Q5D0E6 543 aaKnown RBP27.61■■■□□ 2.01
MDK-213ENST00000617138 GIGYF1O75420 1035 aaPredicted RBP27.6■■■□□ 2.01
MDK-213ENST00000617138 USP16Q9Y5T5 823 aa27.6■■■□□ 2.01
MDK-213ENST00000617138 ZEB1P37275 1124 aaPredicted RBP27.59■■■□□ 2.01
MDK-213ENST00000617138 PDZRN3Q9UPQ7 1066 aa27.59■■■□□ 2.01
MDK-213ENST00000617138 TBC1D2BQ9UPU7 963 aa27.59■■■□□ 2.01
MDK-213ENST00000617138 RGL2O15211 777 aa27.58■■■□□ 2.01
MDK-213ENST00000617138 LMOD3Q0VAK6 560 aa27.58■■■□□ 2.01
MDK-213ENST00000617138 ARHGAP27Q6ZUM4 889 aa27.57■■■□□ 2
MDK-213ENST00000617138 DZIP3Q86Y13 1208 aaKnown RBP27.57■■■□□ 2
MDK-213ENST00000617138 ADCY9O60503 1353 aa27.57■■■□□ 2
MDK-213ENST00000617138 ATP10DQ9P241 1426 aa27.57■■■□□ 2
MDK-213ENST00000617138 CLEC4GQ6UXB4 293 aa27.56■■■□□ 2
MDK-213ENST00000617138 SETDB2Q96T68 719 aa27.56■■■□□ 2
MDK-213ENST00000617138 ZNF652Q9Y2D9 606 aa27.56■■■□□ 2
MDK-213ENST00000617138 CARMIL3Q8ND23 1372 aa27.56■■■□□ 2
MDK-213ENST00000617138 CAMTA2O94983 1202 aa27.55■■■□□ 2
MDK-213ENST00000617138 BICDL1Q6ZP65 573 aa27.55■■■□□ 2
MDK-213ENST00000617138 GPBP1L1Q9HC44 474 aaPredicted RBP27.55■■■□□ 2
MDK-213ENST00000617138 C1QTNF8P60827 252 aa27.54■■■□□ 2
MDK-213ENST00000617138 TBC1D9BQ66K14 1250 aa27.54■■■□□ 2
MDK-213ENST00000617138 KIAA1551Q9HCM1 1747 aa27.54■■■□□ 2
MDK-213ENST00000617138 CHRNA5P30532 468 aa27.53■■■□□ 2
MDK-213ENST00000617138 RIPK4P57078 832 aa27.53■■■□□ 2
MDK-213ENST00000617138 WDR43Q15061 677 aaKnown RBP eCLIP27.53■■■□□ 2
MDK-213ENST00000617138 BABAM1Q9NWV8 329 aa27.53■■■□□ 2
MDK-213ENST00000617138 H0YIN7 160 aa27.52■■■□□ 2
MDK-213ENST00000617138 BRIP1Q9BX63 1249 aa27.52■■■□□ 2
MDK-213ENST00000617138 MIS18AQ9NYP9 233 aa27.52■■■□□ 2
MDK-213ENST00000617138 N4BP2Q86UW6 1770 aaPredicted RBP27.51■■□□□ 1.99
MDK-213ENST00000617138 PRAMEF22A3QJZ6 481 aa27.51■■□□□ 1.99
MDK-213ENST00000617138 NPHP1O15259 732 aa27.51■■□□□ 1.99
MDK-213ENST00000617138 PDE6BP35913 854 aa27.51■■□□□ 1.99
MDK-213ENST00000617138 EIF4A1P60842 406 aaKnown RBP27.5■■□□□ 1.99
MDK-213ENST00000617138 TTLL6Q8N841 843 aa27.49■■□□□ 1.99
MDK-213ENST00000617138 TMPOP42166 694 aaKnown RBP27.48■■□□□ 1.99
MDK-213ENST00000617138 ST5P78524 1137 aa27.48■■□□□ 1.99
MDK-213ENST00000617138 C2CD5Q86YS7 1000 aa27.48■■□□□ 1.99
MDK-213ENST00000617138 CNBD1Q8NA66 436 aa27.48■■□□□ 1.99
MDK-213ENST00000617138 PRKRIP1Q9H875 184 aaPredicted RBP27.48■■□□□ 1.99
MDK-213ENST00000617138 NRXN2Q9P2S2 1712 aa27.47■■□□□ 1.99
MDK-213ENST00000617138 THUMPD2Q9BTF0 503 aaKnown RBP27.47■■□□□ 1.99
MDK-213ENST00000617138 TSPYL4Q9UJ04 414 aa27.47■■□□□ 1.99
MDK-213ENST00000617138 NBPF26B4DH59 902 aa27.46■■□□□ 1.99
MDK-213ENST00000617138 PRR5LQ6MZQ0 368 aa27.46■■□□□ 1.99
MDK-213ENST00000617138 NBPF10Q6P3W6 841 aaKnown RBP27.46■■□□□ 1.99
MDK-213ENST00000617138 NBPF15Q8N660 670 aa27.46■■□□□ 1.99
MDK-213ENST00000617138 RUNDC1Q96C34 613 aa27.46■■□□□ 1.99
MDK-213ENST00000617138 SCN7AQ01118 1682 aa27.46■■□□□ 1.99
MDK-213ENST00000617138 PIP4K2AP48426 406 aaPredicted RBP27.45■■□□□ 1.98
MDK-213ENST00000617138 ERBB4Q15303 1308 aa27.44■■□□□ 1.98
MDK-213ENST00000617138 NBPF5PQ86XG9 351 aaPredicted RBP27.43■■□□□ 1.98
MDK-213ENST00000617138 BRCA1P38398 1863 aaKnown RBP27.42■■□□□ 1.98
MDK-213ENST00000617138 C9orf131Q5VYM1 1079 aa27.42■■□□□ 1.98
MDK-213ENST00000617138 TPTE2Q6XPS3 522 aa27.42■■□□□ 1.98
MDK-213ENST00000617138 ZNF526Q8TF50 670 aaPredicted RBP27.42■■□□□ 1.98
MDK-213ENST00000617138 ERVV-1B6SEH8 477 aa27.41■■□□□ 1.98
MDK-213ENST00000617138 AFDNP55196 1824 aaKnown RBP27.4■■□□□ 1.98
MDK-213ENST00000617138 ARFGEF1Q9Y6D6 1849 aa27.4■■□□□ 1.98
MDK-213ENST00000617138 ADAMTS8Q9UP79 889 aa27.4■■□□□ 1.98
MDK-213ENST00000617138 NIP7Q9Y221 180 aaKnown RBP eCLIP27.4■■□□□ 1.98
MDK-213ENST00000617138 KIF6Q6ZMV9 814 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms