RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 ZBTB1Q9Y2K1 713 aa29.27■■■□□ 2.28
CBWD3-212ENST00000616550 USP42Q9H9J4 1324 aaKnown RBP29.25■■■□□ 2.27
CBWD3-212ENST00000616550 ZPR1O75312 459 aa29.25■■■□□ 2.27
CBWD3-212ENST00000616550 CANXP27824 592 aaKnown RBP29.25■■■□□ 2.27
CBWD3-212ENST00000616550 SRP68Q9UHB9 627 aaKnown RBP29.25■■■□□ 2.27
CBWD3-212ENST00000616550 GPR162Q16538 588 aa29.24■■■□□ 2.27
CBWD3-212ENST00000616550 RIPK4P57078 832 aa29.23■■■□□ 2.27
CBWD3-212ENST00000616550 PNISRQ8TF01 805 aaKnown RBP29.23■■■□□ 2.27
CBWD3-212ENST00000616550 COL15A1P39059 1388 aa29.22■■■□□ 2.27
CBWD3-212ENST00000616550 CCDC146Q8IYE0 955 aa29.21■■■□□ 2.27
CBWD3-212ENST00000616550 PELP1Q8IZL8 1130 aaKnown RBP29.21■■■□□ 2.27
CBWD3-212ENST00000616550 RUNDC1Q96C34 613 aa29.21■■■□□ 2.27
CBWD3-212ENST00000616550 MIS18AQ9NYP9 233 aa29.21■■■□□ 2.27
CBWD3-212ENST00000616550 ADAMTS8Q9UP79 889 aa29.21■■■□□ 2.27
CBWD3-212ENST00000616550 PARP3Q9Y6F1 533 aa29.21■■■□□ 2.27
CBWD3-212ENST00000616550 SNRPA1P09661 255 aaKnown RBP29.2■■■□□ 2.26
CBWD3-212ENST00000616550 TMPOP42166 694 aaKnown RBP29.2■■■□□ 2.26
CBWD3-212ENST00000616550 THUMPD2Q9BTF0 503 aaKnown RBP29.2■■■□□ 2.26
CBWD3-212ENST00000616550 A0A087WZG4 1122 aa29.19■■■□□ 2.26
CBWD3-212ENST00000616550 LMOD3Q0VAK6 560 aa29.19■■■□□ 2.26
CBWD3-212ENST00000616550 FKBP8Q14318 412 aa29.19■■■□□ 2.26
CBWD3-212ENST00000616550 USPL1Q5W0Q7 1092 aa29.19■■■□□ 2.26
CBWD3-212ENST00000616550 NARFQ9UHQ1 456 aa29.19■■■□□ 2.26
CBWD3-212ENST00000616550 USP16Q9Y5T5 823 aa29.18■■■□□ 2.26
CBWD3-212ENST00000616550 A1BGP04217 495 aa29.17■■■□□ 2.26
CBWD3-212ENST00000616550 EIF5P55010 431 aaKnown RBP29.17■■■□□ 2.26
CBWD3-212ENST00000616550 NPM2Q86SE8 214 aaKnown RBP29.17■■■□□ 2.26
CBWD3-212ENST00000616550 ZNF330Q9Y3S2 320 aaPredicted RBP29.16■■■□□ 2.26
CBWD3-212ENST00000616550 IL6STP40189 918 aaPredicted RBP29.15■■■□□ 2.26
CBWD3-212ENST00000616550 NEUROD2Q15784 382 aa29.15■■■□□ 2.26
CBWD3-212ENST00000616550 RRP7AQ9Y3A4 280 aaKnown RBP29.15■■■□□ 2.26
CBWD3-212ENST00000616550 PRAMEF22A3QJZ6 481 aa29.14■■■□□ 2.26
CBWD3-212ENST00000616550 YY1P25490 414 aa29.13■■■□□ 2.25
CBWD3-212ENST00000616550 ANP32CO43423 234 aa29.12■■■□□ 2.25
CBWD3-212ENST00000616550 TM4SF1P30408 202 aa29.12■■■□□ 2.25
CBWD3-212ENST00000616550 KDM3BQ7LBC6 1761 aa29.11■■■□□ 2.25
CBWD3-212ENST00000616550 KIF13BQ9NQT8 1826 aa29.09■■■□□ 2.25
CBWD3-212ENST00000616550 EIF4A1P60842 406 aaKnown RBP29.09■■■□□ 2.25
CBWD3-212ENST00000616550 TGFB2P61812 414 aa29.09■■■□□ 2.25
CBWD3-212ENST00000616550 DDR1Q08345 913 aa29.09■■■□□ 2.25
CBWD3-212ENST00000616550 BCL2L12Q9HB09 334 aa29.09■■■□□ 2.25
CBWD3-212ENST00000616550 TSPYL4Q9UJ04 414 aa29.09■■■□□ 2.25
CBWD3-212ENST00000616550 TBC1D2BQ9UPU7 963 aa29.09■■■□□ 2.25
CBWD3-212ENST00000616550 GRIN3BO60391 1043 aa29.08■■■□□ 2.25
CBWD3-212ENST00000616550 YBX3P16989 372 aaKnown RBP eCLIP29.08■■■□□ 2.25
CBWD3-212ENST00000616550 NFIXQ14938 502 aa29.08■■■□□ 2.25
CBWD3-212ENST00000616550 CHD4Q14839 1912 aa29.08■■■□□ 2.25
CBWD3-212ENST00000616550 POLRMTO00411 1230 aaKnown RBP29.07■■■□□ 2.24
CBWD3-212ENST00000616550 GIGYF1O75420 1035 aaPredicted RBP29.07■■■□□ 2.24
CBWD3-212ENST00000616550 PIP4K2AP48426 406 aaPredicted RBP29.07■■■□□ 2.24
CBWD3-212ENST00000616550 C10orf71Q711Q0 1435 aa29.07■■■□□ 2.24
CBWD3-212ENST00000616550 BABAM1Q9NWV8 329 aa29.07■■■□□ 2.24
CBWD3-212ENST00000616550 TRIM35Q9UPQ4 493 aa29.05■■■□□ 2.24
CBWD3-212ENST00000616550 DZIP3Q86Y13 1208 aaKnown RBP29.04■■■□□ 2.24
CBWD3-212ENST00000616550 A0A0G2JLW4 131 aa29.03■■■□□ 2.24
CBWD3-212ENST00000616550 CCDC184Q52MB2 194 aa29.03■■■□□ 2.24
CBWD3-212ENST00000616550 BICDL1Q6ZP65 573 aa29.03■■■□□ 2.24
CBWD3-212ENST00000616550 WWC3Q9ULE0 1092 aa29.03■■■□□ 2.24
CBWD3-212ENST00000616550 NBPF26B4DH59 902 aa29.02■■■□□ 2.24
CBWD3-212ENST00000616550 NBPF10Q6P3W6 841 aaKnown RBP29.02■■■□□ 2.24
CBWD3-212ENST00000616550 NBPF15Q8N660 670 aa29.02■■■□□ 2.24
CBWD3-212ENST00000616550 LAMB4A4D0S4 1761 aa29.02■■■□□ 2.24
CBWD3-212ENST00000616550 N4BP2Q86UW6 1770 aaPredicted RBP29.02■■■□□ 2.24
CBWD3-212ENST00000616550 PXDNLA1KZ92 1463 aa29.02■■■□□ 2.24
CBWD3-212ENST00000616550 APAF1O14727 1248 aa29.01■■■□□ 2.23
CBWD3-212ENST00000616550 SERPINB2P05120 415 aa29.01■■■□□ 2.23
CBWD3-212ENST00000616550 CAMTA2O94983 1202 aa29■■■□□ 2.23
CBWD3-212ENST00000616550 DPEP1P16444 411 aa29■■■□□ 2.23
CBWD3-212ENST00000616550 TBC1D9BQ66K14 1250 aa29■■■□□ 2.23
CBWD3-212ENST00000616550 LAS1LQ9Y4W2 734 aaKnown RBP29■■■□□ 2.23
CBWD3-212ENST00000616550 SCN7AQ01118 1682 aa28.99■■■□□ 2.23
CBWD3-212ENST00000616550 AFDNP55196 1824 aaKnown RBP28.99■■■□□ 2.23
CBWD3-212ENST00000616550 MRS2Q9HD23 443 aa28.98■■■□□ 2.23
CBWD3-212ENST00000616550 KIAA1551Q9HCM1 1747 aa28.97■■■□□ 2.23
CBWD3-212ENST00000616550 CHL1O00533 1208 aa28.97■■■□□ 2.23
CBWD3-212ENST00000616550 SETDB2Q96T68 719 aa28.96■■■□□ 2.23
CBWD3-212ENST00000616550 ZNF652Q9Y2D9 606 aa28.96■■■□□ 2.23
CBWD3-212ENST00000616550 CLEC4GQ6UXB4 293 aa28.95■■■□□ 2.22
CBWD3-212ENST00000616550 UTRNP46939 3433 aa28.95■■■□□ 2.22
CBWD3-212ENST00000616550 NRXN2Q9P2S2 1712 aa28.94■■■□□ 2.22
CBWD3-212ENST00000616550 BCORQ6W2J9 1755 aa28.94■■■□□ 2.22
CBWD3-212ENST00000616550 NGEFQ8N5V2 710 aa28.94■■■□□ 2.22
CBWD3-212ENST00000616550 BCS1LQ9Y276 419 aa28.94■■■□□ 2.22
CBWD3-212ENST00000616550 CARMIL3Q8ND23 1372 aa28.93■■■□□ 2.22
CBWD3-212ENST00000616550 PIM2Q9P1W9 311 aa28.93■■■□□ 2.22
CBWD3-212ENST00000616550 GOLGB1Q14789 3259 aaKnown RBP28.92■■■□□ 2.22
CBWD3-212ENST00000616550 MYL6BP14649 208 aa28.92■■■□□ 2.22
CBWD3-212ENST00000616550 EIF2S2P20042 333 aaKnown RBP28.92■■■□□ 2.22
CBWD3-212ENST00000616550 KCNA3P22001 575 aa28.92■■■□□ 2.22
CBWD3-212ENST00000616550 ERBB4Q15303 1308 aa28.92■■■□□ 2.22
CBWD3-212ENST00000616550 RGL2O15211 777 aa28.91■■■□□ 2.22
CBWD3-212ENST00000616550 CHRNA5P30532 468 aa28.91■■■□□ 2.22
CBWD3-212ENST00000616550 CALD1Q05682 793 aaKnown RBP28.91■■■□□ 2.22
CBWD3-212ENST00000616550 CFAP44Q96MT7 982 aa28.91■■■□□ 2.22
CBWD3-212ENST00000616550 NPHP1O15259 732 aa28.9■■■□□ 2.22
CBWD3-212ENST00000616550 BRCA1P38398 1863 aaKnown RBP28.89■■■□□ 2.22
CBWD3-212ENST00000616550 KIF6Q6ZMV9 814 aa28.89■■■□□ 2.22
CBWD3-212ENST00000616550 DALRD3Q5D0E6 543 aaKnown RBP28.87■■■□□ 2.21
CBWD3-212ENST00000616550 ERVV-1B6SEH8 477 aa28.86■■■□□ 2.21
CBWD3-212ENST00000616550 HLFQ16534 295 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms