RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 NUTM2AQ8IVF1 878 aaPredicted RBP15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 SETBP1Q9Y6X0 1596 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 RNMTO43148 476 aaKnown RBP15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 POLR1AO95602 1720 aaPredicted RBP15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 CHAF1AQ13111 956 aaPredicted RBP15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 TTC39AQ5SRH9 613 aa15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 ALKQ9UM73 1620 aa15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 CWF19L2Q2TBE0 894 aaKnown RBP15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 ARHGEF10O15013 1369 aa15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 LARP6Q9BRS8 491 aaKnown RBP15.79■□□□□ 0.12
PPP4R3B-206ENST00000616407 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
PPP4R3B-206ENST00000616407 DIP2CQ9Y2E4 1556 aa15.78■□□□□ 0.12
PPP4R3B-206ENST00000616407 USP6P35125 1406 aa15.78■□□□□ 0.12
PPP4R3B-206ENST00000616407 PDCP20941 246 aa15.78■□□□□ 0.12
PPP4R3B-206ENST00000616407 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
PPP4R3B-206ENST00000616407 USP19O94966 1318 aa15.78■□□□□ 0.12
PPP4R3B-206ENST00000616407 KIAA0232Q92628 1395 aa15.78■□□□□ 0.12
PPP4R3B-206ENST00000616407 GRPEL1Q9HAV7 217 aa15.78■□□□□ 0.12
PPP4R3B-206ENST00000616407 GRM8O00222 908 aa15.77■□□□□ 0.12
PPP4R3B-206ENST00000616407 STARD3NLO95772 234 aa15.77■□□□□ 0.12
PPP4R3B-206ENST00000616407 ZNF853P0CG23 659 aa15.77■□□□□ 0.12
PPP4R3B-206ENST00000616407 TULP4Q9NRJ4 1543 aa15.77■□□□□ 0.11
PPP4R3B-206ENST00000616407 ALDH1L1O75891 902 aa15.77■□□□□ 0.11
PPP4R3B-206ENST00000616407 SNX21Q969T3 373 aa15.77■□□□□ 0.11
PPP4R3B-206ENST00000616407 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.11
PPP4R3B-206ENST00000616407 NLRP1Q9C000 1473 aa15.77■□□□□ 0.11
PPP4R3B-206ENST00000616407 QRICH2Q9H0J4 1663 aa15.76■□□□□ 0.11
PPP4R3B-206ENST00000616407 NFXL1Q6ZNB6 911 aa15.76■□□□□ 0.11
PPP4R3B-206ENST00000616407 LINS1Q8NG48 757 aa15.76■□□□□ 0.11
PPP4R3B-206ENST00000616407 LARP1BQ659C4 914 aaKnown RBP15.76■□□□□ 0.11
PPP4R3B-206ENST00000616407 DDX17Q92841 729 aaKnown RBP15.76■□□□□ 0.11
PPP4R3B-206ENST00000616407 ANKRD1Q15327 319 aa15.75■□□□□ 0.11
PPP4R3B-206ENST00000616407 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
PPP4R3B-206ENST00000616407 TBC1D2BQ9UPU7 963 aa15.75■□□□□ 0.11
PPP4R3B-206ENST00000616407 PNMA6EA0A0J9YXQ4 647 aa15.75■□□□□ 0.11
PPP4R3B-206ENST00000616407 SOS1Q07889 1333 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3B-206ENST00000616407 CCDC83Q8IWF9 413 aa15.75■□□□□ 0.11
PPP4R3B-206ENST00000616407 ZCRB1Q8TBF4 217 aaKnown RBP15.75■□□□□ 0.11
PPP4R3B-206ENST00000616407 CAMSAP1Q5T5Y3 1602 aa15.75■□□□□ 0.11
PPP4R3B-206ENST00000616407 EVI5LQ96CN4 794 aa15.74■□□□□ 0.11
PPP4R3B-206ENST00000616407 ZSCAN31Q96LW9 406 aaPredicted RBP15.74■□□□□ 0.11
PPP4R3B-206ENST00000616407 RBM25P49756 843 aaKnown RBP15.74■□□□□ 0.11
PPP4R3B-206ENST00000616407 BECN2A8MW95 431 aa15.73■□□□□ 0.11
PPP4R3B-206ENST00000616407 GOLGA6L19H0YKK7 550 aa15.73■□□□□ 0.11
PPP4R3B-206ENST00000616407 BRPF1P55201 1214 aaPredicted RBP15.73■□□□□ 0.11
PPP4R3B-206ENST00000616407 AKAP17AQ02040 695 aaKnown RBP15.73■□□□□ 0.11
PPP4R3B-206ENST00000616407 USP26Q9BXU7 913 aa15.73■□□□□ 0.11
PPP4R3B-206ENST00000616407 KCNQ3O43525 872 aa15.73■□□□□ 0.11
PPP4R3B-206ENST00000616407 TRIM29Q14134 588 aa15.73■□□□□ 0.11
PPP4R3B-206ENST00000616407 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 TMX3Q96JJ7 454 aa15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 NEXMIFQ5QGS0 1516 aa15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 BAG4O95429 457 aaKnown RBP15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 NBPF7P0C2Y1 421 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 DDX21Q9NR30 783 aaKnown RBP eCLIP15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 CDK12Q9NYV4 1490 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 ADAMTS2O95450 1211 aa15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 LIMCH1Q9UPQ0 1083 aa15.72■□□□□ 0.11
PPP4R3B-206ENST00000616407 KDM4AO75164 1064 aa15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 IQGAP1P46940 1657 aa15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 GPTP24298 496 aa15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 TPM4P67936 248 aa15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 CEBPZQ03701 1054 aaKnown RBP15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 KRT32Q14532 448 aa15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 CWC25Q9NXE8 425 aaPredicted RBP15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 PNPLA6Q8IY17 1366 aa15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 IFIT1P09914 478 aaKnown RBP15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 ZNF790Q6PG37 636 aa15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 FERMT3Q86UX7 667 aa15.71■□□□□ 0.11
PPP4R3B-206ENST00000616407 NRXN1Q9ULB1 1477 aa15.71■□□□□ 0.1
PPP4R3B-206ENST00000616407 RTL1A6NKG5 1358 aa15.71■□□□□ 0.1
PPP4R3B-206ENST00000616407 HOXB7P09629 217 aa15.71■□□□□ 0.1
PPP4R3B-206ENST00000616407 METTL24Q5JXM2 366 aa15.71■□□□□ 0.1
PPP4R3B-206ENST00000616407 PTPRMP28827 1452 aa15.7■□□□□ 0.1
PPP4R3B-206ENST00000616407 CHMLP26374 656 aa15.7■□□□□ 0.1
PPP4R3B-206ENST00000616407 DCAF5Q96JK2 942 aa15.7■□□□□ 0.1
PPP4R3B-206ENST00000616407 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.7■□□□□ 0.15e-6■□□□□ 10.2
PPP4R3B-206ENST00000616407 PIP4K2BP78356 416 aa15.7■□□□□ 0.1
PPP4R3B-206ENST00000616407 CCDC73Q6ZRK6 1079 aa15.7■□□□□ 0.1
PPP4R3B-206ENST00000616407 SASS6Q6UVJ0 657 aa15.7■□□□□ 0.1
PPP4R3B-206ENST00000616407 TSPY26PQ9H489 355 aa15.7■□□□□ 0.1
PPP4R3B-206ENST00000616407 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 TMX4Q9H1E5 349 aaPredicted RBP15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 ERICH2A1L162 156 aa15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 USP44Q9H0E7 712 aa15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 EXOC5O00471 708 aa15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 IFIT5Q13325 482 aaKnown RBP15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 FBXW7Q969H0 707 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms