RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.91■■□□□ 1.16e-6■■■■■ 48.1
SPAST-203ENST00000615843 SMC5Q8IY18 1101 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 FAM200AQ8TCP9 573 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 SPG7Q9UQ90 795 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 CEP126Q9P2H0 1117 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 USP48Q86UV5 1035 aa21.9■■□□□ 1.1
SPAST-203ENST00000615843 RTEL1-TNFRSF6BF6WH68 1400 aa21.9■■□□□ 1.1
SPAST-203ENST00000615843 HMGB1P09429 215 aaKnown RBP21.9■■□□□ 1.1
SPAST-203ENST00000615843 GNG11P61952 73 aa21.9■■□□□ 1.1
SPAST-203ENST00000615843 F6X3S4 739 aa21.9■■□□□ 1.1
SPAST-203ENST00000615843 SKILP12757 684 aa21.9■■□□□ 1.1
SPAST-203ENST00000615843 CTR9Q6PD62 1173 aa21.89■■□□□ 1.1
SPAST-203ENST00000615843 ANKRD62A6NC57 917 aa21.89■■□□□ 1.09
SPAST-203ENST00000615843 CNPY2Q9Y2B0 182 aa21.89■■□□□ 1.09
SPAST-203ENST00000615843 IKQ13123 557 aaPredicted RBP21.89■■□□□ 1.09
SPAST-203ENST00000615843 SMAP1Q8IYB5 467 aaPredicted RBP21.89■■□□□ 1.09
SPAST-203ENST00000615843 CNNM3Q8NE01 707 aa21.88■■□□□ 1.09
SPAST-203ENST00000615843 FAM177BA6PVY3 158 aa21.88■■□□□ 1.09
SPAST-203ENST00000615843 TDO2P48775 406 aa21.88■■□□□ 1.09
SPAST-203ENST00000615843 NUP88Q99567 741 aaPredicted RBP21.88■■□□□ 1.09
SPAST-203ENST00000615843 ZFP91Q96JP5 570 aaPredicted RBP21.87■■□□□ 1.09
SPAST-203ENST00000615843 PCF11O94913 1555 aaKnown RBP21.87■■□□□ 1.09
SPAST-203ENST00000615843 PAFAH1B1P43034 410 aa21.87■■□□□ 1.09
SPAST-203ENST00000615843 ANO6Q4KMQ2 910 aa21.87■■□□□ 1.09
SPAST-203ENST00000615843 CCDC12Q8WUD4 166 aaPredicted RBP21.87■■□□□ 1.09
SPAST-203ENST00000615843 DYDC1Q8WWB3 177 aa21.87■■□□□ 1.09
SPAST-203ENST00000615843 ZSWIM4Q9H7M6 989 aa21.87■■□□□ 1.09
SPAST-203ENST00000615843 GNL3LQ9NVN8 582 aaKnown RBP21.87■■□□□ 1.09
SPAST-203ENST00000615843 SOGA3Q5TF21 947 aa21.87■■□□□ 1.09
SPAST-203ENST00000615843 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
SPAST-203ENST00000615843 BMP2KQ9NSY1 1161 aaPredicted RBP21.87■■□□□ 1.09
SPAST-203ENST00000615843 RPGRIP1LQ68CZ1 1315 aa21.87■■□□□ 1.09
SPAST-203ENST00000615843 MAP2K1Q02750 393 aaPredicted RBP21.87■■□□□ 1.09
SPAST-203ENST00000615843 ANKRD18AQ8IVF6 992 aa21.87■■□□□ 1.09
SPAST-203ENST00000615843 BTBD11A6QL63 1104 aa21.86■■□□□ 1.09
SPAST-203ENST00000615843 YEATS4O95619 227 aa21.86■■□□□ 1.09
SPAST-203ENST00000615843 LUZP1Q86V48 1076 aa21.86■■□□□ 1.09
SPAST-203ENST00000615843 ARFGAP3Q9NP61 516 aa21.86■■□□□ 1.09
SPAST-203ENST00000615843 PTPN23Q9H3S7 1636 aa21.86■■□□□ 1.09
SPAST-203ENST00000615843 SDSP20132 328 aa21.86■■□□□ 1.09
SPAST-203ENST00000615843 SEPT11Q9NVA2 429 aaKnown RBP21.86■■□□□ 1.09
SPAST-203ENST00000615843 SLU7O95391 586 aaKnown RBP21.85■■□□□ 1.09
SPAST-203ENST00000615843 SSBP05455 408 aaKnown RBP eCLIP21.85■■□□□ 1.09
SPAST-203ENST00000615843 PTPRCP08575 1304 aa21.85■■□□□ 1.09
SPAST-203ENST00000615843 GNAT3A8MTJ3 354 aa21.85■■□□□ 1.09
SPAST-203ENST00000615843 MNAT1P51948 309 aa21.85■■□□□ 1.09
SPAST-203ENST00000615843 GTF2A1P52655 376 aaPredicted RBP21.85■■□□□ 1.09
SPAST-203ENST00000615843 RBM25P49756 843 aaKnown RBP21.85■■□□□ 1.09
SPAST-203ENST00000615843 FKBP15Q5T1M5 1219 aa21.85■■□□□ 1.09
SPAST-203ENST00000615843 IVLP07476 585 aa21.84■■□□□ 1.09
SPAST-203ENST00000615843 DNAAF4Q8WXU2 420 aa21.84■■□□□ 1.09
SPAST-203ENST00000615843 SLC26A8Q96RN1 970 aa21.84■■□□□ 1.09
SPAST-203ENST00000615843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.84■■□□□ 1.09
SPAST-203ENST00000615843 USO1O60763 962 aaKnown RBP21.84■■□□□ 1.09
SPAST-203ENST00000615843 TICAM2Q86XR7 235 aa21.84■■□□□ 1.09
SPAST-203ENST00000615843 DNAI1Q9UI46 699 aa21.84■■□□□ 1.09
SPAST-203ENST00000615843 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
SPAST-203ENST00000615843 SEC24BO95487 1268 aa21.83■■□□□ 1.09
SPAST-203ENST00000615843 CCT2P78371 535 aaKnown RBP21.83■■□□□ 1.09
SPAST-203ENST00000615843 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.83■■□□□ 1.09
SPAST-203ENST00000615843 V9GYY5 206 aaPredicted RBP21.83■■□□□ 1.09
SPAST-203ENST00000615843 IGSF3O75054 1194 aa21.83■■□□□ 1.09
SPAST-203ENST00000615843 TSHZ3Q63HK5 1081 aa21.83■■□□□ 1.09
SPAST-203ENST00000615843 DISP3Q9P2K9 1392 aa21.83■■□□□ 1.08
SPAST-203ENST00000615843 TATP17735 454 aaPredicted RBP21.83■■□□□ 1.08
SPAST-203ENST00000615843 CCDC113Q9H0I3 377 aa21.83■■□□□ 1.08
SPAST-203ENST00000615843 GRIN2BQ13224 1484 aa21.83■■□□□ 1.08
SPAST-203ENST00000615843 CCDC8Q9H0W5 538 aaPredicted RBP21.83■■□□□ 1.08
SPAST-203ENST00000615843 IFFO1Q0D2I5 559 aa21.82■■□□□ 1.08
SPAST-203ENST00000615843 EVI5LQ96CN4 794 aa21.82■■□□□ 1.08
SPAST-203ENST00000615843 FEZ1Q99689 392 aa21.82■■□□□ 1.08
SPAST-203ENST00000615843 EPRSP07814 1512 aaKnown RBP21.82■■□□□ 1.08
SPAST-203ENST00000615843 CCDC141Q6ZP82 1450 aa21.82■■□□□ 1.08
SPAST-203ENST00000615843 OGFRQ9NZT2 677 aa21.82■■□□□ 1.08
SPAST-203ENST00000615843 IL16Q14005 1332 aa21.82■■□□□ 1.08
SPAST-203ENST00000615843 IDH1O75874 414 aaKnown RBP21.82■■□□□ 1.08
SPAST-203ENST00000615843 ABCC5O15440 1437 aa21.81■■□□□ 1.08
SPAST-203ENST00000615843 CDK13Q14004 1512 aaKnown RBP21.81■■□□□ 1.08
SPAST-203ENST00000615843 AIDAQ96BJ3 306 aa21.81■■□□□ 1.08
SPAST-203ENST00000615843 ECHDC1Q9NTX5 307 aa21.81■■□□□ 1.08
SPAST-203ENST00000615843 ZSCAN16Q9H4T2 348 aaPredicted RBP21.81■■□□□ 1.08
SPAST-203ENST00000615843 ANAPC15P60006 121 aa21.8■■□□□ 1.08
SPAST-203ENST00000615843 CACNA2D4Q7Z3S7 1137 aa21.8■■□□□ 1.08
SPAST-203ENST00000615843 BCCIPQ9P287 314 aaKnown RBP eCLIP21.8■■□□□ 1.08
SPAST-203ENST00000615843 RSPH14Q9UHP6 348 aa21.8■■□□□ 1.08
SPAST-203ENST00000615843 LIG1P18858 919 aa21.8■■□□□ 1.08
SPAST-203ENST00000615843 EZRP15311 586 aaKnown RBP21.8■■□□□ 1.08
SPAST-203ENST00000615843 ISM2Q6H9L7 571 aa21.8■■□□□ 1.08
SPAST-203ENST00000615843 SLC52A1Q9NWF4 448 aa21.8■■□□□ 1.08
SPAST-203ENST00000615843 TAF7Q15545 349 aaPredicted RBP21.79■■□□□ 1.08
SPAST-203ENST00000615843 PIBF1Q8WXW3 757 aa21.79■■□□□ 1.08
SPAST-203ENST00000615843 DACT1Q9NYF0 836 aa21.79■■□□□ 1.08
SPAST-203ENST00000615843 GOLGA8BA8MQT2 603 aa21.79■■□□□ 1.08
SPAST-203ENST00000615843 GBP2P32456 591 aaPredicted RBP21.79■■□□□ 1.08
SPAST-203ENST00000615843 DNA2P51530 1060 aa21.79■■□□□ 1.08
SPAST-203ENST00000615843 CABP4P57796 275 aa21.79■■□□□ 1.08
SPAST-203ENST00000615843 F13A1P00488 732 aa21.79■■□□□ 1.08
SPAST-203ENST00000615843 SRRTQ9BXP5 876 aaKnown RBP21.79■■□□□ 1.08
SPAST-203ENST00000615843 DNAJC25Q9H1X3 360 aa21.79■■□□□ 1.08
SPAST-203ENST00000615843 TUBB4AP04350 444 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms