RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CENPHQ9H3R5 247 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 FBXO3Q9UK99 471 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 SLC5A1P13866 664 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 TTF1Q15361 905 aaPredicted RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 PTPN14Q15678 1187 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 SKIDA1Q1XH10 827 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 CAVIN4Q5BKX8 364 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 PPP4R3AQ6IN85 833 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 TMCO3Q6UWJ1 677 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 TMOD2Q9NZR1 351 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 HMG20BQ9P0W2 317 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 TAF7Q15545 349 aaPredicted RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 MPHOSPH10O00566 681 aaKnown RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 METTL24Q5JXM2 366 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 FILIP1Q7Z7B0 1213 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 DDX19AQ9NUU7 478 aaKnown RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 LRRFIP2Q9Y608 721 aaKnown RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 PIK3R4Q99570 1358 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 RBM5P52756 815 aaKnown RBP eCLIP5.31□□□□□ -1.56
CHD9-221ENST00000615216 CCDC12Q8WUD4 166 aaPredicted RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 NUDT16Q96DE0 195 aaKnown RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 PAF1Q8N7H5 531 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 CCDC102AQ96A19 550 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 ALS2CR12Q96Q35 445 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 CCDC61Q9Y6R9 512 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 ARHGEF12Q9NZN5 1544 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 RARSP54136 660 aaKnown RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 SSRP1Q08945 709 aaKnown RBP5.31□□□□□ -1.56
CHD9-221ENST00000615216 MICALCLQ6ZW33 695 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 C8orf76Q96K31 380 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 FAM177BA6PVY3 158 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 RRS1Q15050 365 aaKnown RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 CD109Q6YHK3 1445 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 KLHL34Q8N239 644 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 LIMCH1Q9UPQ0 1083 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 KDM5BQ9UGL1 1544 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 BICRAQ9NZM4 1560 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 MAST1Q9Y2H9 1570 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 GCOM1H8Y6P7 765 aaPredicted RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 MYZAPP0CAP1 466 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 KANK3Q6NY19 840 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 EVI5LQ96CN4 794 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 TOP1P11387 765 aaKnown RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 FAM193AP78312 1265 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 MAP3K12Q12852 859 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 EHBP1Q8NDI1 1231 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 BCL11BQ9C0K0 894 aaPredicted RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 IFIT1P09914 478 aaKnown RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 RBM10P98175 930 aaKnown RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 PRDM11Q9NQV5 511 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 ANKRD62A6NC57 917 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 SF3B2Q13435 895 aaKnown RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 CUL5Q93034 780 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 SLC12A7Q9Y666 1083 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 FANCAO15360 1455 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 DNMT1P26358 1616 aaKnown RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 GOLGA6L10A0A0M3HER8 536 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 USO1O60763 962 aaKnown RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 CLIP2Q9UDT6 1046 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 YEATS4O95619 227 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 SSBP05455 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
CHD9-221ENST00000615216 NAPBQ9H115 298 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 UVSSAQ2YD98 709 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 TAX1BP1Q86VP1 789 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 CTCFLQ8NI51 663 aaPredicted RBP5.3□□□□□ -1.56
CHD9-221ENST00000615216 TAOK3Q9H2K8 898 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 TMOD3Q9NYL9 352 aa5.3□□□□□ -1.56
CHD9-221ENST00000615216 KIF5BP33176 963 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 CATIPQ7Z7H3 387 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 LRRC27Q9C0I9 530 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 MYO5CQ9NQX4 1742 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 IDH1O75874 414 aaKnown RBP5.29□□□□□ -1.56
CHD9-221ENST00000615216 PRPF40BQ6NWY9 871 aaKnown RBP5.29□□□□□ -1.56
CHD9-221ENST00000615216 FAM177A1Q8N128 213 aaPredicted RBP5.29□□□□□ -1.56
CHD9-221ENST00000615216 DDX12PQ92771 950 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 NEBLO76041 1014 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 NAA15Q9BXJ9 866 aaKnown RBP5.29□□□□□ -1.56
CHD9-221ENST00000615216 USP5P45974 858 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 NUTM1Q86Y26 1132 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 DDX54Q8TDD1 881 aaKnown RBP5.29□□□□□ -1.56
CHD9-221ENST00000615216 PLXNC1O60486 1568 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 AMPD3Q01432 767 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 IFIT5Q13325 482 aaKnown RBP5.29□□□□□ -1.56
CHD9-221ENST00000615216 BMP2KLQ5H9B9 411 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 PPP4R3BQ5MIZ7 849 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 IQCA1Q86XH1 822 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 ZPR1O75312 459 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 SHANK2Q9UPX8 1470 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 KIAA0556O60303 1618 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 TTC21AQ8NDW8 1320 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 GOLGA8BA8MQT2 603 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 SSH1Q8WYL5 1049 aa5.29□□□□□ -1.56
CHD9-221ENST00000615216 CAMK4Q16566 473 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 STXBP4Q6ZWJ1 553 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 ZFYVE9O95405 1425 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 POLR3DP05423 398 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 CETN1Q12798 172 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 CACNA2D4Q7Z3S7 1137 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 LUZP1Q86V48 1076 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 DZIP1Q86YF9 867 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms