RNA–Protein interactions for RNA: ENST00000613445.4

SLC1A3-216, Transcript of solute carrier family 1 member 3, humanhuman

TSL 5 BASIC

Gene SLC1A3, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-216ENST00000613445 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 TNS2Q63HR2 1409 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 LRRC37A3O60309 1634 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 DDB1Q16531 1140 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 BMP2KLQ5H9B9 411 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 EYA1Q99502 592 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 KDRP35968 1356 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 RRP9O43818 475 aaKnown RBP6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 NBPF6Q5VWK0 638 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 KRT27Q7Z3Y8 459 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 TSR2Q969E8 191 aaKnown RBP6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 NBPF4Q96M43 638 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 PKD1L3Q7Z443 1732 aa6.38□□□□□ -1.39
SLC1A3-216ENST00000613445 ESPNB1AK53 854 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 TMPOP42166 694 aaKnown RBP6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 PLEKHO1Q53GL0 409 aaPredicted RBP6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 TMEM57Q8N5G2 664 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 RGPD2P0DJD1 1756 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 FCHSD2O94868 740 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 HSP90AB1P08238 724 aaKnown RBP6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 FBLN1P23142 703 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 FAM196AQ6ZSG2 479 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 PDLIM2Q96JY6 352 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 ABCC4O15439 1325 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 PCDH11XQ9BZA7 1347 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 PCDH11YQ9BZA8 1340 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 DDX11L8A8MPP1 907 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 ZBTB7BO15156 539 aaPredicted RBP6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 EXOSC9Q06265 439 aaKnown RBP6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 ZCRB1Q8TBF4 217 aaKnown RBP6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 MYH16Q9H6N6 1097 aa6.37□□□□□ -1.39
SLC1A3-216ENST00000613445 DEFB132Q7Z7B7 95 aa6.36□□□□□ -1.39
SLC1A3-216ENST00000613445 TFCP2L1Q9NZI6 479 aa6.36□□□□□ -1.39
SLC1A3-216ENST00000613445 DDX19BQ9UMR2 479 aa6.36□□□□□ -1.39
SLC1A3-216ENST00000613445 CACNA1FO60840 1977 aa6.36□□□□□ -1.39
SLC1A3-216ENST00000613445 BRWD3Q6RI45 1802 aa6.36□□□□□ -1.39
SLC1A3-216ENST00000613445 ZNF853P0CG23 659 aa6.36□□□□□ -1.39
SLC1A3-216ENST00000613445 ALDH1L2Q3SY69 923 aa6.36□□□□□ -1.39
SLC1A3-216ENST00000613445 RIPK4P57078 832 aa6.35□□□□□ -1.39
SLC1A3-216ENST00000613445 NOB1Q9ULX3 412 aaKnown RBP6.35□□□□□ -1.39
SLC1A3-216ENST00000613445 KIF16BQ96L93 1317 aa6.35□□□□□ -1.39
SLC1A3-216ENST00000613445 ZNF445P59923 1031 aa6.35□□□□□ -1.39
SLC1A3-216ENST00000613445 GSPT1P15170 499 aaKnown RBP6.35□□□□□ -1.39
SLC1A3-216ENST00000613445 MFAP1P55081 439 aaKnown RBP6.35□□□□□ -1.39
SLC1A3-216ENST00000613445 CHD1LQ86WJ1 897 aa6.35□□□□□ -1.39
SLC1A3-216ENST00000613445 GAS2L2Q8NHY3 880 aa6.35□□□□□ -1.39
SLC1A3-216ENST00000613445 NKX1-1Q15270 411 aaPredicted RBP6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 SULT6B1Q6IMI4 303 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 IFNL2Q8IZJ0 200 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 MEGF6O75095 1541 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 U2SURPO15042 1029 aaKnown RBP6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 HTATSF1O43719 755 aaKnown RBP6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 EIF5BO60841 1220 aaKnown RBP6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 TERF1P54274 439 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 UPF2Q9HAU5 1272 aaKnown RBP6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 TRIM37O94972 964 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 TBC1D9Q6ZT07 1266 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 SPRYD3Q8NCJ5 442 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 IL17RAQ96F46 866 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 RBM42Q9BTD8 480 aaKnown RBP6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
SLC1A3-216ENST00000613445 ZBTB7AO95365 584 aa6.34□□□□□ -1.4
SLC1A3-216ENST00000613445 U2AF1L5P0DN76 240 aaPredicted RBP6.34□□□□□ -1.4
SLC1A3-216ENST00000613445 U2AF1Q01081 240 aaKnown RBP eCLIP6.34□□□□□ -1.4
SLC1A3-216ENST00000613445 KLHL40Q2TBA0 621 aa6.34□□□□□ -1.4
SLC1A3-216ENST00000613445 C1orf141Q5JVX7 400 aa6.34□□□□□ -1.4
SLC1A3-216ENST00000613445 ARHGAP45Q92619 1136 aa6.34□□□□□ -1.4
SLC1A3-216ENST00000613445 SPON1Q9HCB6 807 aa6.34□□□□□ -1.4
SLC1A3-216ENST00000613445 SHANK3Q9BYB0 1731 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 FAM177BA6PVY3 158 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 AKAP4Q5JQC9 854 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 MRPL50Q8N5N7 158 aaKnown RBP6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 ACSBG1Q96GR2 724 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 RGPD3A6NKT7 1758 aaPredicted RBP6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 RGPD4Q7Z3J3 1758 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 PHF14O94880 888 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 NHSQ6T4R5 1651 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 VAMP4O75379 141 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 OFD1O75665 1012 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 EN1Q05925 392 aaPredicted RBP6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 USHBP1Q8N6Y0 703 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 ZMYND15Q9H091 742 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 LMBRD1Q9NUN5 540 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 PRDM4Q9UKN5 801 aa6.33□□□□□ -1.4
SLC1A3-216ENST00000613445 ERVV-2B6SEH9 535 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 K7ELQ4 463 aaPredicted RBP6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 ZNF500O60304 480 aaPredicted RBP6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 SSFA2P28290 1259 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 LMOD3Q0VAK6 560 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 DCAF5Q96JK2 942 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 GPBP1L1Q9HC44 474 aaPredicted RBP6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 SMC4Q9NTJ3 1288 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 BAG4O95429 457 aaKnown RBP6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 MARCH10Q8NA82 808 aaPredicted RBP6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 ZNF428Q96B54 188 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 PHKG2P15735 406 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 HS1BP3Q53T59 392 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 SBF2Q86WG5 1849 aa6.32□□□□□ -1.4
SLC1A3-216ENST00000613445 SKOR2Q2VWA4 1001 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms