RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 CABP4P57796 275 aa22.23■■□□□ 1.15
SEMA6C-209ENST00000613223 TTC5Q8N0Z6 440 aa22.23■■□□□ 1.15
SEMA6C-209ENST00000613223 KSR2Q6VAB6 950 aa22.22■■□□□ 1.15
SEMA6C-209ENST00000613223 EVA1CP58658 441 aa22.21■■□□□ 1.15
SEMA6C-209ENST00000613223 LARP1Q6PKG0 1096 aaKnown RBP22.21■■□□□ 1.15
SEMA6C-209ENST00000613223 ZNF496Q96IT1 587 aaPredicted RBP22.21■■□□□ 1.15
SEMA6C-209ENST00000613223 STRN4Q9NRL3 753 aa22.21■■□□□ 1.15
SEMA6C-209ENST00000613223 PNMA6EA0A0J9YXQ4 647 aa22.2■■□□□ 1.14
SEMA6C-209ENST00000613223 MFAP1P55081 439 aaKnown RBP22.2■■□□□ 1.14
SEMA6C-209ENST00000613223 PDIA6Q15084 440 aa22.2■■□□□ 1.14
SEMA6C-209ENST00000613223 FMNL2Q96PY5 1086 aa22.2■■□□□ 1.14
SEMA6C-209ENST00000613223 MAP3K2Q9Y2U5 619 aa22.2■■□□□ 1.14
SEMA6C-209ENST00000613223 SHANK3Q9BYB0 1731 aa22.2■■□□□ 1.14
SEMA6C-209ENST00000613223 LTBP4Q8N2S1 1624 aa22.2■■□□□ 1.14
SEMA6C-209ENST00000613223 SMARCA5O60264 1052 aaPredicted RBP22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 DDX58O95786 925 aaKnown RBP22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 SNRPA1P09661 255 aaKnown RBP22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 APBB1O00213 710 aa22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 ALDH1L1O75891 902 aa22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 NKX1-1Q15270 411 aaPredicted RBP22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 TTC22Q5TAA0 569 aa22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 C16orf71Q8IYS4 520 aaPredicted RBP22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
SEMA6C-209ENST00000613223 NFKBIBQ15653 356 aa22.18■■□□□ 1.14
SEMA6C-209ENST00000613223 ERVV-2B6SEH9 535 aa22.18■■□□□ 1.14
SEMA6C-209ENST00000613223 GSPT1P15170 499 aaKnown RBP22.18■■□□□ 1.14
SEMA6C-209ENST00000613223 SLC4A3P48751 1232 aa22.18■■□□□ 1.14
SEMA6C-209ENST00000613223 C22orf23Q9BZE7 217 aa22.18■■□□□ 1.14
SEMA6C-209ENST00000613223 COL14A1Q05707 1796 aaKnown RBP22.18■■□□□ 1.14
SEMA6C-209ENST00000613223 GLI3P10071 1580 aa22.17■■□□□ 1.14
SEMA6C-209ENST00000613223 IBTKQ9P2D0 1353 aaPredicted RBP22.17■■□□□ 1.14
SEMA6C-209ENST00000613223 OTUD7AQ8TE49 926 aaPredicted RBP22.17■■□□□ 1.14
SEMA6C-209ENST00000613223 SSH3Q8TE77 659 aa22.17■■□□□ 1.14
SEMA6C-209ENST00000613223 EXOC6BQ9Y2D4 811 aa22.17■■□□□ 1.14
SEMA6C-209ENST00000613223 NBPF7P0C2Y1 421 aaPredicted RBP22.16■■□□□ 1.14
SEMA6C-209ENST00000613223 LAMB4A4D0S4 1761 aa22.16■■□□□ 1.14
SEMA6C-209ENST00000613223 LRRCC1Q9C099 1032 aa22.16■■□□□ 1.14
SEMA6C-209ENST00000613223 CDC45O75419 566 aa22.15■■□□□ 1.14
SEMA6C-209ENST00000613223 TBC1D9Q6ZT07 1266 aa22.15■■□□□ 1.14
SEMA6C-209ENST00000613223 POLA2Q14181 598 aa22.14■■□□□ 1.14
SEMA6C-209ENST00000613223 LINS1Q8NG48 757 aa22.14■■□□□ 1.14
SEMA6C-209ENST00000613223 PAPPAQ13219 1627 aa22.14■■□□□ 1.13
SEMA6C-209ENST00000613223 BECN1Q14457 450 aa22.14■■□□□ 1.13
SEMA6C-209ENST00000613223 PPP1R42Q7Z4L9 355 aa22.14■■□□□ 1.13
SEMA6C-209ENST00000613223 OSBPL3Q9H4L5 887 aa22.14■■□□□ 1.13
SEMA6C-209ENST00000613223 BTG4Q9NY30 223 aa22.14■■□□□ 1.13
SEMA6C-209ENST00000613223 UBR2Q8IWV8 1755 aa22.13■■□□□ 1.13
SEMA6C-209ENST00000613223 HDAC5Q9UQL6 1122 aa22.13■■□□□ 1.13
SEMA6C-209ENST00000613223 AIMP1Q12904 312 aaKnown RBP22.12■■□□□ 1.13
SEMA6C-209ENST00000613223 USP16Q9Y5T5 823 aa22.12■■□□□ 1.13
SEMA6C-209ENST00000613223 EIF5BO60841 1220 aaKnown RBP22.12■■□□□ 1.13
SEMA6C-209ENST00000613223 DDX54Q8TDD1 881 aaKnown RBP22.12■■□□□ 1.13
SEMA6C-209ENST00000613223 C9orf78Q9NZ63 289 aaPredicted RBP22.12■■□□□ 1.13
SEMA6C-209ENST00000613223 COL16A1Q07092 1604 aaPredicted RBP22.11■■□□□ 1.13
SEMA6C-209ENST00000613223 MYL6BP14649 208 aa22.11■■□□□ 1.13
SEMA6C-209ENST00000613223 XAGE3Q8WTP9 111 aa22.11■■□□□ 1.13
SEMA6C-209ENST00000613223 SRGAP3O43295 1099 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 MTX1Q13505 466 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 LRP10Q7Z4F1 713 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 RIC3Q7Z5B4 369 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 SALL3Q9BXA9 1300 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 RAB11FIP3O75154 756 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 RBM25P49756 843 aaKnown RBP22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 PDE1AP54750 535 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 CWF19L2Q2TBE0 894 aaKnown RBP22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 KCPQ6ZWJ8 1503 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 UTYO14607 1347 aa22.1■■□□□ 1.13
SEMA6C-209ENST00000613223 GSE1Q14687 1217 aa22.09■■□□□ 1.13
SEMA6C-209ENST00000613223 COPS6Q7L5N1 327 aa22.09■■□□□ 1.13
SEMA6C-209ENST00000613223 ERBB4Q15303 1308 aa22.09■■□□□ 1.13
SEMA6C-209ENST00000613223 TOGARAM1Q9Y4F4 1720 aa22.08■■□□□ 1.13
SEMA6C-209ENST00000613223 TNS2Q63HR2 1409 aa22.08■■□□□ 1.13
SEMA6C-209ENST00000613223 PLCH1Q4KWH8 1693 aa22.08■■□□□ 1.13
SEMA6C-209ENST00000613223 GRM8O00222 908 aa22.08■■□□□ 1.12
SEMA6C-209ENST00000613223 NEXNQ0ZGT2 675 aa22.08■■□□□ 1.12
SEMA6C-209ENST00000613223 DISP2A7MBM2 1401 aa22.08■■□□□ 1.12
SEMA6C-209ENST00000613223 SDSP20132 328 aa22.07■■□□□ 1.12
SEMA6C-209ENST00000613223 SURF6O75683 361 aaKnown RBP22.07■■□□□ 1.12
SEMA6C-209ENST00000613223 METTL22Q9BUU2 404 aaPredicted RBP22.07■■□□□ 1.12
SEMA6C-209ENST00000613223 IGKV5-2P06315 115 aa22.06■■□□□ 1.12
SEMA6C-209ENST00000613223 MX1P20591 662 aa22.06■■□□□ 1.12
SEMA6C-209ENST00000613223 HSP90AB4PQ58FF6 505 aa22.06■■□□□ 1.12
SEMA6C-209ENST00000613223 ANKRD13DQ6ZTN6 518 aa22.06■■□□□ 1.12
SEMA6C-209ENST00000613223 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
SEMA6C-209ENST00000613223 STAP2Q9UGK3 403 aa22.05■■□□□ 1.12
SEMA6C-209ENST00000613223 NEURL1BA8MQ27 555 aa22.04■■□□□ 1.12
SEMA6C-209ENST00000613223 CASC1Q6TDU7 716 aa22.04■■□□□ 1.12
SEMA6C-209ENST00000613223 KIF1BPQ96EK5 621 aa22.04■■□□□ 1.12
SEMA6C-209ENST00000613223 TUBGCP6Q96RT7 1819 aa22.04■■□□□ 1.12
SEMA6C-209ENST00000613223 ARFGEF2Q9Y6D5 1785 aa22.04■■□□□ 1.12
SEMA6C-209ENST00000613223 AOX1Q06278 1338 aa22.03■■□□□ 1.12
SEMA6C-209ENST00000613223 RHPN1Q8TCX5 695 aa22.03■■□□□ 1.12
SEMA6C-209ENST00000613223 PIP4K2AP48426 406 aaPredicted RBP22.03■■□□□ 1.12
SEMA6C-209ENST00000613223 MYD88Q99836 296 aa22.03■■□□□ 1.12
SEMA6C-209ENST00000613223 TBC1D2Q9BYX2 928 aa22.03■■□□□ 1.12
SEMA6C-209ENST00000613223 TMOD3Q9NYL9 352 aa22.03■■□□□ 1.12
SEMA6C-209ENST00000613223 SUCLG2Q96I99 432 aa22.02■■□□□ 1.12
SEMA6C-209ENST00000613223 GCKRQ14397 625 aa22.01■■□□□ 1.11
SEMA6C-209ENST00000613223 WNK3Q9BYP7 1800 aa22.01■■□□□ 1.11
SEMA6C-209ENST00000613223 IL1RAPL2Q9NP60 686 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms