RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 USP16Q9Y5T5 823 aa23.71■■□□□ 1.39
IGHV3-41-201ENST00000613121 SRP68Q9UHB9 627 aaKnown RBP23.7■■□□□ 1.38
IGHV3-41-201ENST00000613121 TSPYL4Q9UJ04 414 aa23.7■■□□□ 1.38
IGHV3-41-201ENST00000613121 TAF1LQ8IZX4 1826 aa23.7■■□□□ 1.38
IGHV3-41-201ENST00000613121 SOS1Q07889 1333 aaPredicted RBP23.69■■□□□ 1.38
IGHV3-41-201ENST00000613121 APAF1O14727 1248 aa23.69■■□□□ 1.38
IGHV3-41-201ENST00000613121 A1BGP04217 495 aa23.69■■□□□ 1.38
IGHV3-41-201ENST00000613121 GYS1P13807 737 aa23.69■■□□□ 1.38
IGHV3-41-201ENST00000613121 PRAMEF22A3QJZ6 481 aa23.68■■□□□ 1.38
IGHV3-41-201ENST00000613121 MMP10P09238 476 aa23.68■■□□□ 1.38
IGHV3-41-201ENST00000613121 LAS1LQ9Y4W2 734 aaKnown RBP23.68■■□□□ 1.38
IGHV3-41-201ENST00000613121 A0A087WZG4 1122 aa23.67■■□□□ 1.38
IGHV3-41-201ENST00000613121 QSER1Q2KHR3 1735 aa23.67■■□□□ 1.38
IGHV3-41-201ENST00000613121 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
IGHV3-41-201ENST00000613121 TRIM35Q9UPQ4 493 aa23.66■■□□□ 1.38
IGHV3-41-201ENST00000613121 PARP3Q9Y6F1 533 aa23.66■■□□□ 1.38
IGHV3-41-201ENST00000613121 ZNF831Q5JPB2 1677 aa23.66■■□□□ 1.38
IGHV3-41-201ENST00000613121 USP42Q9H9J4 1324 aaKnown RBP23.65■■□□□ 1.38
IGHV3-41-201ENST00000613121 IL6STP40189 918 aaPredicted RBP23.65■■□□□ 1.38
IGHV3-41-201ENST00000613121 EIF5P55010 431 aaKnown RBP23.65■■□□□ 1.38
IGHV3-41-201ENST00000613121 EIF4A1P60842 406 aaKnown RBP23.65■■□□□ 1.38
IGHV3-41-201ENST00000613121 NARFQ9UHQ1 456 aa23.65■■□□□ 1.38
IGHV3-41-201ENST00000613121 FKBP8Q14318 412 aa23.64■■□□□ 1.37
IGHV3-41-201ENST00000613121 BABAM1Q9NWV8 329 aa23.64■■□□□ 1.37
IGHV3-41-201ENST00000613121 COL15A1P39059 1388 aa23.64■■□□□ 1.37
IGHV3-41-201ENST00000613121 TUBGCP6Q96RT7 1819 aa23.63■■□□□ 1.37
IGHV3-41-201ENST00000613121 CD2APQ9Y5K6 639 aa23.63■■□□□ 1.37
IGHV3-41-201ENST00000613121 GIGYF1O75420 1035 aaPredicted RBP23.62■■□□□ 1.37
IGHV3-41-201ENST00000613121 PIP4K2AP48426 406 aaPredicted RBP23.62■■□□□ 1.37
IGHV3-41-201ENST00000613121 PELP1Q8IZL8 1130 aaKnown RBP23.62■■□□□ 1.37
IGHV3-41-201ENST00000613121 TBC1D2BQ9UPU7 963 aa23.62■■□□□ 1.37
IGHV3-41-201ENST00000613121 NLGN2Q8NFZ4 835 aa23.61■■□□□ 1.37
IGHV3-41-201ENST00000613121 UBR3Q6ZT12 1888 aa23.61■■□□□ 1.37
IGHV3-41-201ENST00000613121 TJP1Q07157 1748 aa23.6■■□□□ 1.37
IGHV3-41-201ENST00000613121 SENP3-EIF4A1A0A087X0R7 540 aa23.6■■□□□ 1.37
IGHV3-41-201ENST00000613121 GPR162Q16538 588 aa23.6■■□□□ 1.37
IGHV3-41-201ENST00000613121 FAM9BQ8IZU0 186 aa23.6■■□□□ 1.37
IGHV3-41-201ENST00000613121 CHL1O00533 1208 aa23.58■■□□□ 1.37
IGHV3-41-201ENST00000613121 CALD1Q05682 793 aaKnown RBP23.58■■□□□ 1.37
IGHV3-41-201ENST00000613121 COL5A3P25940 1745 aaPredicted RBP23.58■■□□□ 1.37
IGHV3-41-201ENST00000613121 EIF2S2P20042 333 aaKnown RBP23.57■■□□□ 1.36
IGHV3-41-201ENST00000613121 BICDL1Q6ZP65 573 aa23.57■■□□□ 1.36
IGHV3-41-201ENST00000613121 DZIP3Q86Y13 1208 aaKnown RBP23.57■■□□□ 1.36
IGHV3-41-201ENST00000613121 NGEFQ8N5V2 710 aa23.57■■□□□ 1.36
IGHV3-41-201ENST00000613121 TM4SF1P30408 202 aa23.56■■□□□ 1.36
IGHV3-41-201ENST00000613121 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
IGHV3-41-201ENST00000613121 VIRMAQ69YN4 1812 aaKnown RBP23.55■■□□□ 1.36
IGHV3-41-201ENST00000613121 CFAP44Q96MT7 982 aa23.55■■□□□ 1.36
IGHV3-41-201ENST00000613121 BCL2L12Q9HB09 334 aa23.55■■□□□ 1.36
IGHV3-41-201ENST00000613121 MYH14Q7Z406 1995 aaKnown RBP23.54■■□□□ 1.36
IGHV3-41-201ENST00000613121 NBPF26B4DH59 902 aa23.54■■□□□ 1.36
IGHV3-41-201ENST00000613121 NFIXQ14938 502 aa23.54■■□□□ 1.36
IGHV3-41-201ENST00000613121 NBPF10Q6P3W6 841 aaKnown RBP23.54■■□□□ 1.36
IGHV3-41-201ENST00000613121 NBPF15Q8N660 670 aa23.54■■□□□ 1.36
IGHV3-41-201ENST00000613121 UBR2Q8IWV8 1755 aa23.54■■□□□ 1.36
IGHV3-41-201ENST00000613121 CICQ96RK0 1608 aaPredicted RBP23.53■■□□□ 1.36
IGHV3-41-201ENST00000613121 MYL6BP14649 208 aa23.53■■□□□ 1.36
IGHV3-41-201ENST00000613121 DDR1Q08345 913 aa23.53■■□□□ 1.36
IGHV3-41-201ENST00000613121 SALL2Q9Y467 1007 aaPredicted RBP23.53■■□□□ 1.36
IGHV3-41-201ENST00000613121 POLRMTO00411 1230 aaKnown RBP23.52■■□□□ 1.36
IGHV3-41-201ENST00000613121 GNAI1P63096 354 aa23.52■■□□□ 1.36
IGHV3-41-201ENST00000613121 CAMTA2O94983 1202 aa23.51■■□□□ 1.35
IGHV3-41-201ENST00000613121 SERPINB2P05120 415 aa23.51■■□□□ 1.35
IGHV3-41-201ENST00000613121 TGFB2P61812 414 aa23.5■■□□□ 1.35
IGHV3-41-201ENST00000613121 TBC1D9BQ66K14 1250 aa23.5■■□□□ 1.35
IGHV3-41-201ENST00000613121 NECTIN2Q92692 538 aa23.5■■□□□ 1.35
IGHV3-41-201ENST00000613121 SETDB2Q96T68 719 aa23.5■■□□□ 1.35
IGHV3-41-201ENST00000613121 MBIPQ9NS73 344 aa23.5■■□□□ 1.35
IGHV3-41-201ENST00000613121 IFT57Q9NWB7 429 aa23.5■■□□□ 1.35
IGHV3-41-201ENST00000613121 WWC3Q9ULE0 1092 aa23.5■■□□□ 1.35
IGHV3-41-201ENST00000613121 ZNF652Q9Y2D9 606 aa23.5■■□□□ 1.35
IGHV3-41-201ENST00000613121 DLG5Q8TDM6 1919 aa23.49■■□□□ 1.35
IGHV3-41-201ENST00000613121 NPHP1O15259 732 aa23.49■■□□□ 1.35
IGHV3-41-201ENST00000613121 KRT24Q2M2I5 525 aa23.49■■□□□ 1.35
IGHV3-41-201ENST00000613121 A0A0G2JLW4 131 aa23.48■■□□□ 1.35
IGHV3-41-201ENST00000613121 COL24A1Q17RW2 1714 aa23.47■■□□□ 1.35
IGHV3-41-201ENST00000613121 CCDC27Q2M243 656 aa23.47■■□□□ 1.35
IGHV3-41-201ENST00000613121 CLEC4GQ6UXB4 293 aa23.47■■□□□ 1.35
IGHV3-41-201ENST00000613121 KIF6Q6ZMV9 814 aa23.47■■□□□ 1.35
IGHV3-41-201ENST00000613121 WWC1Q8IX03 1113 aa23.47■■□□□ 1.35
IGHV3-41-201ENST00000613121 GRIN3BO60391 1043 aa23.46■■□□□ 1.35
IGHV3-41-201ENST00000613121 ZNF853P0CG23 659 aa23.46■■□□□ 1.35
IGHV3-41-201ENST00000613121 ERBB4Q15303 1308 aa23.46■■□□□ 1.35
IGHV3-41-201ENST00000613121 DPEP1P16444 411 aa23.45■■□□□ 1.34
IGHV3-41-201ENST00000613121 DUSP27Q5VZP5 1158 aa23.45■■□□□ 1.34
IGHV3-41-201ENST00000613121 ELL2O00472 640 aaPredicted RBP23.44■■□□□ 1.34
IGHV3-41-201ENST00000613121 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
IGHV3-41-201ENST00000613121 ANXA1P04083 346 aa23.43■■□□□ 1.34
IGHV3-41-201ENST00000613121 YBX3P16989 372 aaKnown RBP eCLIP23.43■■□□□ 1.34
IGHV3-41-201ENST00000613121 NCBP3Q53F19 620 aaKnown RBP23.43■■□□□ 1.34
IGHV3-41-201ENST00000613121 TTLL7Q6ZT98 887 aa23.43■■□□□ 1.34
IGHV3-41-201ENST00000613121 NIP7Q9Y221 180 aaKnown RBP eCLIP23.43■■□□□ 1.34
IGHV3-41-201ENST00000613121 HOXB7P09629 217 aa23.42■■□□□ 1.34
IGHV3-41-201ENST00000613121 HLFQ16534 295 aa23.42■■□□□ 1.34
IGHV3-41-201ENST00000613121 ZBTB3Q9H5J0 574 aa23.42■■□□□ 1.34
IGHV3-41-201ENST00000613121 ERVV-1B6SEH8 477 aa23.41■■□□□ 1.34
IGHV3-41-201ENST00000613121 YY1P25490 414 aa23.41■■□□□ 1.34
IGHV3-41-201ENST00000613121 AIMP1Q12904 312 aaKnown RBP23.41■■□□□ 1.34
IGHV3-41-201ENST00000613121 PDIA6Q15084 440 aa23.41■■□□□ 1.34
IGHV3-41-201ENST00000613121 BCS1LQ9Y276 419 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms