RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ARHGAP45Q92619 1136 aa22.37■■□□□ 1.17
SREK1-216ENST00000612404 CRBNQ96SW2 442 aa22.37■■□□□ 1.17
SREK1-216ENST00000612404 MS4A1P11836 297 aa22.36■■□□□ 1.17
SREK1-216ENST00000612404 CACNA1FO60840 1977 aa22.36■■□□□ 1.17
SREK1-216ENST00000612404 ANXA1P04083 346 aa22.36■■□□□ 1.17
SREK1-216ENST00000612404 RLBP1P12271 317 aa22.36■■□□□ 1.17
SREK1-216ENST00000612404 PTF1AQ7RTS3 328 aa22.36■■□□□ 1.17
SREK1-216ENST00000612404 EXOC6Q8TAG9 804 aa22.36■■□□□ 1.17
SREK1-216ENST00000612404 FLIIQ13045 1269 aa22.34■■□□□ 1.17
SREK1-216ENST00000612404 FAM196AQ6ZSG2 479 aa22.34■■□□□ 1.17
SREK1-216ENST00000612404 VSIG10Q8N0Z9 540 aa22.34■■□□□ 1.17
SREK1-216ENST00000612404 API5Q9BZZ5 524 aaKnown RBP22.34■■□□□ 1.17
SREK1-216ENST00000612404 PTPRCP08575 1304 aa22.34■■□□□ 1.17
SREK1-216ENST00000612404 NHSQ6T4R5 1651 aa22.34■■□□□ 1.17
SREK1-216ENST00000612404 LAMB4A4D0S4 1761 aa22.34■■□□□ 1.17
SREK1-216ENST00000612404 SMARCC1Q92922 1105 aaPredicted RBP22.34■■□□□ 1.17
SREK1-216ENST00000612404 PHAXQ9H814 394 aaKnown RBP22.34■■□□□ 1.17
SREK1-216ENST00000612404 COG6Q9Y2V7 657 aa22.34■■□□□ 1.17
SREK1-216ENST00000612404 RGS12O14924 1447 aa22.33■■□□□ 1.17
SREK1-216ENST00000612404 PALLDQ8WX93 1383 aa22.33■■□□□ 1.17
SREK1-216ENST00000612404 PROSER3Q2NL68 480 aa22.33■■□□□ 1.17
SREK1-216ENST00000612404 SBF2Q86WG5 1849 aa22.33■■□□□ 1.17
SREK1-216ENST00000612404 MYL6BP14649 208 aa22.33■■□□□ 1.16
SREK1-216ENST00000612404 FKBP5Q13451 457 aaPredicted RBP22.33■■□□□ 1.16
SREK1-216ENST00000612404 DDX21Q9NR30 783 aaKnown RBP eCLIP22.33■■□□□ 1.16
SREK1-216ENST00000612404 ERICH6BQ5W0A0 696 aa22.32■■□□□ 1.16
SREK1-216ENST00000612404 DNAJC10Q8IXB1 793 aa22.32■■□□□ 1.16
SREK1-216ENST00000612404 SLC4A9Q96Q91 983 aa22.32■■□□□ 1.16
SREK1-216ENST00000612404 TEX13AQ9BXU3 409 aaPredicted RBP22.32■■□□□ 1.16
SREK1-216ENST00000612404 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
SREK1-216ENST00000612404 PDIA6Q15084 440 aa22.31■■□□□ 1.16
SREK1-216ENST00000612404 HYPKQ9NX55 129 aa22.31■■□□□ 1.16
SREK1-216ENST00000612404 BTAF1O14981 1849 aa22.31■■□□□ 1.16
SREK1-216ENST00000612404 LOC102724428A0A0B4J2F2 783 aa22.3■■□□□ 1.16
SREK1-216ENST00000612404 STARD3NLO95772 234 aa22.3■■□□□ 1.16
SREK1-216ENST00000612404 SIK1P57059 783 aa22.3■■□□□ 1.16
SREK1-216ENST00000612404 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
SREK1-216ENST00000612404 ATP6V1AP38606 617 aa22.29■■□□□ 1.16
SREK1-216ENST00000612404 ITPRIPQ8IWB1 547 aa22.29■■□□□ 1.16
SREK1-216ENST00000612404 BCL11BQ9C0K0 894 aaPredicted RBP22.29■■□□□ 1.16
SREK1-216ENST00000612404 A1BGP04217 495 aa22.28■■□□□ 1.16
SREK1-216ENST00000612404 ABCC4O15439 1325 aa22.28■■□□□ 1.16
SREK1-216ENST00000612404 F6X3S4 739 aa22.28■■□□□ 1.16
SREK1-216ENST00000612404 MVPQ14764 893 aaKnown RBP22.28■■□□□ 1.16
SREK1-216ENST00000612404 AIMP1Q12904 312 aaKnown RBP22.27■■□□□ 1.16
SREK1-216ENST00000612404 ERBB4Q15303 1308 aa22.27■■□□□ 1.16
SREK1-216ENST00000612404 TRIM37O94972 964 aa22.27■■□□□ 1.15
SREK1-216ENST00000612404 SLC4A10Q6U841 1118 aa22.26■■□□□ 1.15
SREK1-216ENST00000612404 NBPF26B4DH59 902 aa22.25■■□□□ 1.15
SREK1-216ENST00000612404 NBPF14Q5TI25 921 aa22.25■■□□□ 1.15
SREK1-216ENST00000612404 NBPF10Q6P3W6 841 aaKnown RBP22.25■■□□□ 1.15
SREK1-216ENST00000612404 NBPF15Q8N660 670 aa22.25■■□□□ 1.15
SREK1-216ENST00000612404 TJP1Q07157 1748 aa22.25■■□□□ 1.15
SREK1-216ENST00000612404 CYP19A1P11511 503 aaPredicted RBP22.25■■□□□ 1.15
SREK1-216ENST00000612404 XAGE3Q8WTP9 111 aa22.24■■□□□ 1.15
SREK1-216ENST00000612404 PPP4R2Q9NY27 417 aa22.24■■□□□ 1.15
SREK1-216ENST00000612404 COPS6Q7L5N1 327 aa22.24■■□□□ 1.15
SREK1-216ENST00000612404 DDX19BQ9UMR2 479 aa22.24■■□□□ 1.15
SREK1-216ENST00000612404 PI4KAP2A4QPH2 592 aa22.23■■□□□ 1.15
SREK1-216ENST00000612404 ITPK1Q13572 414 aa22.23■■□□□ 1.15
SREK1-216ENST00000612404 LRP10Q7Z4F1 713 aa22.23■■□□□ 1.15
SREK1-216ENST00000612404 PI4KAP1Q8N8J0 262 aa22.23■■□□□ 1.15
SREK1-216ENST00000612404 DDX58O95786 925 aaKnown RBP22.22■■□□□ 1.15
SREK1-216ENST00000612404 ZNF330Q9Y3S2 320 aaPredicted RBP22.22■■□□□ 1.15
SREK1-216ENST00000612404 KCNQ4P56696 695 aa22.22■■□□□ 1.15
SREK1-216ENST00000612404 INTS3Q68E01 1043 aaKnown RBP22.21■■□□□ 1.15
SREK1-216ENST00000612404 KSR2Q6VAB6 950 aa22.2■■□□□ 1.14
SREK1-216ENST00000612404 DNAAF4Q8WXU2 420 aa22.2■■□□□ 1.14
SREK1-216ENST00000612404 MAP3K2Q9Y2U5 619 aa22.2■■□□□ 1.14
SREK1-216ENST00000612404 ADCY9O60503 1353 aa22.2■■□□□ 1.14
SREK1-216ENST00000612404 CRKLP46109 303 aaKnown RBP22.19■■□□□ 1.14
SREK1-216ENST00000612404 CCT4P50991 539 aaKnown RBP22.19■■□□□ 1.14
SREK1-216ENST00000612404 RIC3Q7Z5B4 369 aa22.19■■□□□ 1.14
SREK1-216ENST00000612404 CCNL1Q9UK58 526 aaPredicted RBP22.19■■□□□ 1.14
SREK1-216ENST00000612404 ZBTB1Q9Y2K1 713 aa22.19■■□□□ 1.14
SREK1-216ENST00000612404 ZNF831Q5JPB2 1677 aa22.18■■□□□ 1.14
SREK1-216ENST00000612404 CCDC87Q9NVE4 849 aa22.18■■□□□ 1.14
SREK1-216ENST00000612404 CICQ96RK0 1608 aaPredicted RBP22.18■■□□□ 1.14
SREK1-216ENST00000612404 ANKRD13DQ6ZTN6 518 aa22.18■■□□□ 1.14
SREK1-216ENST00000612404 B4GALNT3Q6L9W6 998 aa22.17■■□□□ 1.14
SREK1-216ENST00000612404 CCDC136Q96JN2 1154 aa22.17■■□□□ 1.14
SREK1-216ENST00000612404 LY75O60449 1722 aa22.17■■□□□ 1.14
SREK1-216ENST00000612404 INTS5Q6P9B9 1019 aaKnown RBP22.16■■□□□ 1.14
SREK1-216ENST00000612404 TTLL7Q6ZT98 887 aa22.16■■□□□ 1.14
SREK1-216ENST00000612404 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
SREK1-216ENST00000612404 LINC00116Q8NCU8 138 aa22.16■■□□□ 1.14
SREK1-216ENST00000612404 ARXQ96QS3 562 aa22.16■■□□□ 1.14
SREK1-216ENST00000612404 PXDNLA1KZ92 1463 aa22.16■■□□□ 1.14
SREK1-216ENST00000612404 CHMP4BQ9H444 224 aaKnown RBP22.16■■□□□ 1.14
SREK1-216ENST00000612404 ZBTB7BO15156 539 aaPredicted RBP22.15■■□□□ 1.14
SREK1-216ENST00000612404 COL5A3P25940 1745 aaPredicted RBP22.15■■□□□ 1.14
SREK1-216ENST00000612404 AAMPQ13685 434 aa22.15■■□□□ 1.14
SREK1-216ENST00000612404 SRCIN1Q9C0H9 1055 aa22.15■■□□□ 1.14
SREK1-216ENST00000612404 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
SREK1-216ENST00000612404 PLBD2Q8NHP8 589 aa22.14■■□□□ 1.13
SREK1-216ENST00000612404 APBA3O96018 575 aa22.13■■□□□ 1.13
SREK1-216ENST00000612404 BEND3Q5T5X7 828 aa22.13■■□□□ 1.13
SREK1-216ENST00000612404 ZBTB40Q9NUA8 1239 aa22.13■■□□□ 1.13
SREK1-216ENST00000612404 MYH14Q7Z406 1995 aaKnown RBP22.13■■□□□ 1.13
SREK1-216ENST00000612404 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 889 ms