RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 SLC39A6Q13433 755 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 CASTP20810 708 aaKnown RBP7.64□□□□□ -1.19
SNX13-213ENST00000611725 CWF19L2Q2TBE0 894 aaKnown RBP7.64□□□□□ -1.19
SNX13-213ENST00000611725 DDX54Q8TDD1 881 aaKnown RBP7.64□□□□□ -1.19
SNX13-213ENST00000611725 PTCH1Q13635 1447 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 FSD2A1L4K1 749 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 EIF4A1P60842 406 aaKnown RBP7.64□□□□□ -1.19
SNX13-213ENST00000611725 CHRNA2Q15822 529 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 UBE3BQ7Z3V4 1068 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 CADPS2Q86UW7 1296 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 DDX21Q9NR30 783 aaKnown RBP eCLIP7.64□□□□□ -1.19
SNX13-213ENST00000611725 CLCN1P35523 988 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 FERMT3Q86UX7 667 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 FMNL2Q96PY5 1086 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 A0A087WZG4 1122 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 PTCD1O75127 700 aaKnown RBP7.63□□□□□ -1.19
SNX13-213ENST00000611725 GRM8O00222 908 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 LARP1BQ659C4 914 aaKnown RBP7.63□□□□□ -1.19
SNX13-213ENST00000611725 COPS6Q7L5N1 327 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 SYCE3A1L190 88 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 ANKRD13DQ6ZTN6 518 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 BICD2Q8TD16 824 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 OSBPL3Q9H4L5 887 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 CD2BP2O95400 341 aaKnown RBP7.63□□□□□ -1.19
SNX13-213ENST00000611725 XAGE3Q8WTP9 111 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 CEP126Q9P2H0 1117 aa7.63□□□□□ -1.19
SNX13-213ENST00000611725 PA2G4Q9UQ80 394 aaKnown RBP7.63□□□□□ -1.19
SNX13-213ENST00000611725 PPRC1Q5VV67 1664 aaKnown RBP7.62□□□□□ -1.19
SNX13-213ENST00000611725 CPLX1O14810 134 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 DRC7Q8IY82 874 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 MYD88Q99836 296 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 NEURL4Q96JN8 1562 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 NRDCO43847 1150 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 SNRPA1P09661 255 aaKnown RBP7.62□□□□□ -1.19
SNX13-213ENST00000611725 EVI5LQ96CN4 794 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 STRN4Q9NRL3 753 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 ANKRD1Q15327 319 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 WASHC4Q2M389 1173 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 ZSCAN30Q86W11 494 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 GDPD2Q9HCC8 539 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 SH2B1Q9NRF2 756 aaPredicted RBP7.62□□□□□ -1.19
SNX13-213ENST00000611725 TTC41PQ6P2S7 1318 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 RNMTO43148 476 aaKnown RBP7.62□□□□□ -1.19
SNX13-213ENST00000611725 CHAF1AQ13111 956 aaPredicted RBP7.62□□□□□ -1.19
SNX13-213ENST00000611725 IQSEC2Q5JU85 1478 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 KRT85P78386 507 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 SF3A1Q15459 793 aaKnown RBP7.62□□□□□ -1.19
SNX13-213ENST00000611725 CPLX2Q6PUV4 134 aaKnown RBP7.62□□□□□ -1.19
SNX13-213ENST00000611725 CCDC83Q8IWF9 413 aa7.62□□□□□ -1.19
SNX13-213ENST00000611725 INTS4Q96HW7 963 aaKnown RBP7.62□□□□□ -1.19
SNX13-213ENST00000611725 PDIA4P13667 645 aaKnown RBP7.61□□□□□ -1.19
SNX13-213ENST00000611725 GNL2Q13823 731 aaKnown RBP7.61□□□□□ -1.19
SNX13-213ENST00000611725 KRT32Q14532 448 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 SYTL4Q96C24 671 aaPredicted RBP7.61□□□□□ -1.19
SNX13-213ENST00000611725 KCNQ3O43525 872 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 NEXMIFQ5QGS0 1516 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 SGSM2O43147 1006 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 TOMM22Q9NS69 142 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 DIP2CQ9Y2E4 1556 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 ATP5J2-PTCD1G3V325 749 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 TSPY26PQ9H489 355 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 GLI2P10070 1586 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 FRMPD1Q5SYB0 1578 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 NPHP3Q7Z494 1330 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 CFAP74Q9C0B2 1584 aa7.61□□□□□ -1.19
SNX13-213ENST00000611725 RALYLQ86SE5 291 aaKnown RBP7.61□□□□□ -1.19
SNX13-213ENST00000611725 LARP6Q9BRS8 491 aaKnown RBP7.61□□□□□ -1.19
SNX13-213ENST00000611725 GIGYF1O75420 1035 aaPredicted RBP7.6□□□□□ -1.19
SNX13-213ENST00000611725 BEND3Q5T5X7 828 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 GOLGA6L6A8MZA4 724 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 TRDNQ13061 729 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 ZNF496Q96IT1 587 aaPredicted RBP7.6□□□□□ -1.19
SNX13-213ENST00000611725 ALKQ9UM73 1620 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 NLRP1Q9C000 1473 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 BECN2A8MW95 431 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 EPB41L2O43491 1005 aaKnown RBP7.6□□□□□ -1.19
SNX13-213ENST00000611725 STX6O43752 255 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 ARHGEF25Q86VW2 580 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 CABLES1Q8TDN4 633 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 AOX1Q06278 1338 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 ZNF790Q6PG37 636 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.6□□□□□ -1.19
SNX13-213ENST00000611725 CCDC73Q6ZRK6 1079 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 TCEANC2Q96MN5 208 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 ZBTB3Q9H5J0 574 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 STAP2Q9UGK3 403 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 PALD1Q9ULE6 856 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 RAD50Q92878 1312 aa7.6□□□□□ -1.19
SNX13-213ENST00000611725 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 DCAF5Q96JK2 942 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 APPP05067 770 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 GTF2E1P29083 439 aaPredicted RBP7.59□□□□□ -1.19
SNX13-213ENST00000611725 STK3Q13188 491 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 LMBR1LQ6UX01 489 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 TECPR2O15040 1411 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 JARID2Q92833 1246 aaPredicted RBP7.59□□□□□ -1.19
SNX13-213ENST00000611725 MROH1Q8NDA8 1641 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 IBTKQ9P2D0 1353 aaPredicted RBP7.59□□□□□ -1.19
SNX13-213ENST00000611725 CCDC57Q2TAC2 916 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms