RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TBX22Q9Y458 520 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
LIG4-204ENST00000611712 TPM2P07951 284 aa10.37□□□□□ -0.75
LIG4-204ENST00000611712 MAP3K5Q99683 1374 aa10.37□□□□□ -0.75
LIG4-204ENST00000611712 SASS6Q6UVJ0 657 aa10.37□□□□□ -0.75
LIG4-204ENST00000611712 KRT85P78386 507 aa10.37□□□□□ -0.75
LIG4-204ENST00000611712 KIDINS220Q9ULH0 1771 aa10.37□□□□□ -0.75
LIG4-204ENST00000611712 PRIM1P49642 420 aaKnown RBP10.36□□□□□ -0.75
LIG4-204ENST00000611712 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
LIG4-204ENST00000611712 LRRC59Q96AG4 307 aaKnown RBP10.36□□□□□ -0.75
LIG4-204ENST00000611712 SOS1Q07889 1333 aaPredicted RBP10.36□□□□□ -0.75
LIG4-204ENST00000611712 ANKRD1Q15327 319 aa10.36□□□□□ -0.75
LIG4-204ENST00000611712 LARP1Q6PKG0 1096 aaKnown RBP10.36□□□□□ -0.75
LIG4-204ENST00000611712 EVA1CP58658 441 aa10.36□□□□□ -0.75
LIG4-204ENST00000611712 LRRFIP1Q32MZ4 808 aaKnown RBP10.36□□□□□ -0.75
LIG4-204ENST00000611712 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
LIG4-204ENST00000611712 ADGRB1O14514 1584 aa10.36□□□□□ -0.75
LIG4-204ENST00000611712 VWDEQ8N2E2 1590 aa10.36□□□□□ -0.75
LIG4-204ENST00000611712 STX6O43752 255 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 CABP4P57796 275 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 WASHC4Q2M389 1173 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 CHMP4CQ96CF2 233 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 PTCH1Q13635 1447 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 CPLX1O14810 134 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 RBM10P98175 930 aaKnown RBP10.35□□□□□ -0.75
LIG4-204ENST00000611712 CEBPZQ03701 1054 aaKnown RBP10.35□□□□□ -0.75
LIG4-204ENST00000611712 LRSAM1Q6UWE0 723 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 MYD88Q99836 296 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 ROBO2Q9HCK4 1378 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 CCDC192P0DO97 292 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 EVI5LQ96CN4 794 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 TOMM22Q9NS69 142 aa10.35□□□□□ -0.75
LIG4-204ENST00000611712 PA2G4Q9UQ80 394 aaKnown RBP10.35□□□□□ -0.75
LIG4-204ENST00000611712 CDK12Q9NYV4 1490 aaPredicted RBP10.35□□□□□ -0.75
LIG4-204ENST00000611712 PKP1Q13835 747 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 CCDC73Q6ZRK6 1079 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 SPC24Q8NBT2 197 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 ANKRD24Q8TF21 1146 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
LIG4-204ENST00000611712 FSD2A1L4K1 749 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 CCDC183Q5T5S1 534 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 FBXW7Q969H0 707 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 ALKQ9UM73 1620 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 ARHGEF10O15013 1369 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 APPP05067 770 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 GAS2L3Q86XJ1 694 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 IL17REQ8NFR9 667 aa10.34□□□□□ -0.75
LIG4-204ENST00000611712 MED14O60244 1454 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 TPM4P67936 248 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 AKAP4Q5JQC9 854 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 LGR6Q9HBX8 967 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 NEXMIFQ5QGS0 1516 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 PTPRMP28827 1452 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 DEPDC5O75140 1603 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 GJB2P29033 226 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 CWF19L2Q2TBE0 894 aaKnown RBP10.33□□□□□ -0.76
LIG4-204ENST00000611712 TRIM5Q9C035 493 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 USP44Q9H0E7 712 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 LRRC7Q96NW7 1537 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 A2ML1A8K2U0 1454 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 NBPF7P0C2Y1 421 aaPredicted RBP10.33□□□□□ -0.76
LIG4-204ENST00000611712 USP48Q86UV5 1035 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 JARID2Q92833 1246 aaPredicted RBP10.33□□□□□ -0.76
LIG4-204ENST00000611712 INTS4Q96HW7 963 aaKnown RBP10.33□□□□□ -0.76
LIG4-204ENST00000611712 TNMDQ9H2S6 317 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 USP25Q9UHP3 1055 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 KSR2Q6VAB6 950 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 IP6K1Q92551 441 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 SPATA32Q96LK8 384 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 LMBRD1Q9NUN5 540 aa10.33□□□□□ -0.76
LIG4-204ENST00000611712 DDX11Q96FC9 970 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 ALDH1L1O75891 902 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 ZSCAN22P10073 491 aaPredicted RBP10.32□□□□□ -0.76
LIG4-204ENST00000611712 SLC39A6Q13433 755 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 KRT32Q14532 448 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 NECAB1Q8N987 351 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 TCEANC2Q96MN5 208 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 CNPY2Q9Y2B0 182 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 AK2P54819 239 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 TRDNQ13061 729 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 RALYLQ86SE5 291 aaKnown RBP10.32□□□□□ -0.76
LIG4-204ENST00000611712 RBSNQ9H1K0 784 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 NUP62CLQ9H1M0 184 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 ARHGEF40Q8TER5 1519 aa10.32□□□□□ -0.76
LIG4-204ENST00000611712 GRM8O00222 908 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 CPA1P15085 419 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 CAMK4Q16566 473 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 CPLX2Q6PUV4 134 aaKnown RBP10.31□□□□□ -0.76
LIG4-204ENST00000611712 KRT28Q7Z3Y7 464 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 ZNF592Q92610 1267 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 BABAM1Q9NWV8 329 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 CAMSAP1Q5T5Y3 1602 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 SDF4Q9BRK5 362 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 PALD1Q9ULE6 856 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 MROH2AA6NES4 1674 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 NPHP1O15259 732 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 CHAMP1Q96JM3 812 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 USP6P35125 1406 aa10.31□□□□□ -0.76
LIG4-204ENST00000611712 A0A087WZG4 1122 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms