RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 KCNQ3O43525 872 aa18.72■□□□□ 0.59
HDDC2-209ENST00000609477 NEUROD2Q15784 382 aa18.72■□□□□ 0.59
HDDC2-209ENST00000609477 NLGN1Q8N2Q7 840 aa18.72■□□□□ 0.59
HDDC2-209ENST00000609477 TRIM35Q9UPQ4 493 aa18.72■□□□□ 0.59
HDDC2-209ENST00000609477 CALD1Q05682 793 aaKnown RBP18.71■□□□□ 0.59
HDDC2-209ENST00000609477 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
HDDC2-209ENST00000609477 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
HDDC2-209ENST00000609477 APAF1O14727 1248 aa18.7■□□□□ 0.58
HDDC2-209ENST00000609477 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
HDDC2-209ENST00000609477 A0A087WZG4 1122 aa18.69■□□□□ 0.58
HDDC2-209ENST00000609477 IL6STP40189 918 aaPredicted RBP18.69■□□□□ 0.58
HDDC2-209ENST00000609477 EIF4A1P60842 406 aaKnown RBP18.69■□□□□ 0.58
HDDC2-209ENST00000609477 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
HDDC2-209ENST00000609477 ZBTB1Q9Y2K1 713 aa18.69■□□□□ 0.58
HDDC2-209ENST00000609477 C4AP0C0L4 1744 aa18.69■□□□□ 0.58
HDDC2-209ENST00000609477 EIF5P55010 431 aaKnown RBP18.68■□□□□ 0.58
HDDC2-209ENST00000609477 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
HDDC2-209ENST00000609477 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
HDDC2-209ENST00000609477 COL15A1P39059 1388 aa18.68■□□□□ 0.58
HDDC2-209ENST00000609477 CHL1O00533 1208 aa18.67■□□□□ 0.58
HDDC2-209ENST00000609477 ZPR1O75312 459 aa18.67■□□□□ 0.58
HDDC2-209ENST00000609477 GIGYF1O75420 1035 aaPredicted RBP18.67■□□□□ 0.58
HDDC2-209ENST00000609477 GYS1P13807 737 aa18.67■□□□□ 0.58
HDDC2-209ENST00000609477 CCDC27Q2M243 656 aa18.67■□□□□ 0.58
HDDC2-209ENST00000609477 SMIM5Q71RC9 77 aa18.67■□□□□ 0.58
HDDC2-209ENST00000609477 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
HDDC2-209ENST00000609477 NARFQ9UHQ1 456 aa18.67■□□□□ 0.58
HDDC2-209ENST00000609477 USP16Q9Y5T5 823 aa18.67■□□□□ 0.58
HDDC2-209ENST00000609477 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
HDDC2-209ENST00000609477 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
HDDC2-209ENST00000609477 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
HDDC2-209ENST00000609477 CFAP44Q96MT7 982 aa18.66■□□□□ 0.58
HDDC2-209ENST00000609477 FHDC1Q9C0D6 1143 aaPredicted RBP18.66■□□□□ 0.58
HDDC2-209ENST00000609477 SYT17Q9BSW7 474 aa18.65■□□□□ 0.58
HDDC2-209ENST00000609477 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
HDDC2-209ENST00000609477 CCER2I3L3R5 266 aa18.63■□□□□ 0.57
HDDC2-209ENST00000609477 A1BGP04217 495 aa18.63■□□□□ 0.57
HDDC2-209ENST00000609477 CD2APQ9Y5K6 639 aa18.63■□□□□ 0.57
HDDC2-209ENST00000609477 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
HDDC2-209ENST00000609477 RGL2O15211 777 aa18.62■□□□□ 0.57
HDDC2-209ENST00000609477 MMP10P09238 476 aa18.62■□□□□ 0.57
HDDC2-209ENST00000609477 GNAI1P63096 354 aa18.62■□□□□ 0.57
HDDC2-209ENST00000609477 IFT57Q9NWB7 429 aa18.62■□□□□ 0.57
HDDC2-209ENST00000609477 ERBB4Q15303 1308 aa18.62■□□□□ 0.57
HDDC2-209ENST00000609477 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
HDDC2-209ENST00000609477 ZNF853P0CG23 659 aa18.61■□□□□ 0.57
HDDC2-209ENST00000609477 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
HDDC2-209ENST00000609477 HOXB7P09629 217 aa18.6■□□□□ 0.57
HDDC2-209ENST00000609477 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
HDDC2-209ENST00000609477 PARP3Q9Y6F1 533 aa18.6■□□□□ 0.57
HDDC2-209ENST00000609477 TM4SF1P30408 202 aa18.59■□□□□ 0.57
HDDC2-209ENST00000609477 FKBP8Q14318 412 aa18.59■□□□□ 0.57
HDDC2-209ENST00000609477 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
HDDC2-209ENST00000609477 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
HDDC2-209ENST00000609477 IL16Q14005 1332 aa18.58■□□□□ 0.57
HDDC2-209ENST00000609477 NBPF26B4DH59 902 aa18.58■□□□□ 0.56
HDDC2-209ENST00000609477 NBPF10Q6P3W6 841 aaKnown RBP18.58■□□□□ 0.56
HDDC2-209ENST00000609477 CLEC4GQ6UXB4 293 aa18.58■□□□□ 0.56
HDDC2-209ENST00000609477 WWC1Q8IX03 1113 aa18.58■□□□□ 0.56
HDDC2-209ENST00000609477 NBPF15Q8N660 670 aa18.58■□□□□ 0.56
HDDC2-209ENST00000609477 CHMP4AQ9BY43 222 aa18.58■□□□□ 0.56
HDDC2-209ENST00000609477 DZIP3Q86Y13 1208 aaKnown RBP18.57■□□□□ 0.56
HDDC2-209ENST00000609477 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
HDDC2-209ENST00000609477 ZNF330Q9Y3S2 320 aaPredicted RBP18.57■□□□□ 0.56
HDDC2-209ENST00000609477 SCN7AQ01118 1682 aa18.57■□□□□ 0.56
HDDC2-209ENST00000609477 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
HDDC2-209ENST00000609477 WDR63Q8IWG1 891 aa18.56■□□□□ 0.56
HDDC2-209ENST00000609477 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
HDDC2-209ENST00000609477 TBC1D2BQ9UPU7 963 aa18.56■□□□□ 0.56
HDDC2-209ENST00000609477 CAMTA2O94983 1202 aa18.55■□□□□ 0.56
HDDC2-209ENST00000609477 KLHL34Q8N239 644 aa18.55■□□□□ 0.56
HDDC2-209ENST00000609477 ZNF652Q9Y2D9 606 aa18.55■□□□□ 0.56
HDDC2-209ENST00000609477 KIF13BQ9NQT8 1826 aa18.55■□□□□ 0.56
HDDC2-209ENST00000609477 POLRMTO00411 1230 aaKnown RBP18.54■□□□□ 0.56
HDDC2-209ENST00000609477 TGFB2P61812 414 aa18.54■□□□□ 0.56
HDDC2-209ENST00000609477 BCORQ6W2J9 1755 aa18.54■□□□□ 0.56
HDDC2-209ENST00000609477 ERVV-1B6SEH8 477 aa18.53■□□□□ 0.56
HDDC2-209ENST00000609477 NFIXQ14938 502 aa18.53■□□□□ 0.56
HDDC2-209ENST00000609477 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.56
HDDC2-209ENST00000609477 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.56
HDDC2-209ENST00000609477 PIP4K2AP48426 406 aaPredicted RBP18.52■□□□□ 0.56
HDDC2-209ENST00000609477 DDR1Q08345 913 aa18.52■□□□□ 0.56
HDDC2-209ENST00000609477 PDIA6Q15084 440 aa18.51■□□□□ 0.55
HDDC2-209ENST00000609477 NLGN2Q8NFZ4 835 aa18.51■□□□□ 0.55
HDDC2-209ENST00000609477 SETDB2Q96T68 719 aa18.51■□□□□ 0.55
HDDC2-209ENST00000609477 CARMIL3Q8ND23 1372 aa18.51■□□□□ 0.55
HDDC2-209ENST00000609477 NRXN2Q9P2S2 1712 aa18.51■□□□□ 0.55
HDDC2-209ENST00000609477 SERPINB2P05120 415 aa18.5■□□□□ 0.55
HDDC2-209ENST00000609477 MYL6BP14649 208 aa18.5■□□□□ 0.55
HDDC2-209ENST00000609477 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
HDDC2-209ENST00000609477 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
HDDC2-209ENST00000609477 TBC1D9BQ66K14 1250 aa18.5■□□□□ 0.55
HDDC2-209ENST00000609477 KIF6Q6ZMV9 814 aa18.5■□□□□ 0.55
HDDC2-209ENST00000609477 DDX21Q9NR30 783 aaKnown RBP eCLIP18.5■□□□□ 0.55
HDDC2-209ENST00000609477 DBF4Q9UBU7 674 aaPredicted RBP18.5■□□□□ 0.55
HDDC2-209ENST00000609477 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
HDDC2-209ENST00000609477 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
HDDC2-209ENST00000609477 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
HDDC2-209ENST00000609477 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
HDDC2-209ENST00000609477 AFDNP55196 1824 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms