RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SSH3Q8TE77 659 aa26.92■■□□□ 1.9
SHANK2-220ENST00000608988 MAP3K19Q56UN5 1328 aa26.92■■□□□ 1.9
SHANK2-220ENST00000608988 TTC21AQ8NDW8 1320 aa26.92■■□□□ 1.9
SHANK2-220ENST00000608988 FLT4P35916 1363 aa26.92■■□□□ 1.9
SHANK2-220ENST00000608988 TSHZ3Q63HK5 1081 aa26.91■■□□□ 1.9
SHANK2-220ENST00000608988 FKBP5Q13451 457 aaPredicted RBP26.91■■□□□ 1.9
SHANK2-220ENST00000608988 NOLC1Q14978 699 aaKnown RBP eCLIP26.91■■□□□ 1.9
SHANK2-220ENST00000608988 TTC14Q96N46 770 aa26.91■■□□□ 1.9
SHANK2-220ENST00000608988 UPF3BQ9BZI7 483 aaKnown RBP26.91■■□□□ 1.9
SHANK2-220ENST00000608988 ACEP12821 1306 aa26.91■■□□□ 1.9
SHANK2-220ENST00000608988 PDIA4P13667 645 aaKnown RBP26.9■■□□□ 1.9
SHANK2-220ENST00000608988 SGSM2O43147 1006 aa26.89■■□□□ 1.9
SHANK2-220ENST00000608988 CCDC94Q9BW85 323 aaPredicted RBP26.89■■□□□ 1.9
SHANK2-220ENST00000608988 LIMCH1Q9UPQ0 1083 aa26.89■■□□□ 1.9
SHANK2-220ENST00000608988 CRYBG1Q9Y4K1 1723 aa26.89■■□□□ 1.9
SHANK2-220ENST00000608988 NOL8Q76FK4 1167 aaKnown RBP26.89■■□□□ 1.89
SHANK2-220ENST00000608988 IGSF1Q8N6C5 1336 aa26.89■■□□□ 1.89
SHANK2-220ENST00000608988 ADCY5O95622 1261 aa26.88■■□□□ 1.89
SHANK2-220ENST00000608988 MIS18AQ9NYP9 233 aa26.88■■□□□ 1.89
SHANK2-220ENST00000608988 LRRFIP2Q9Y608 721 aaKnown RBP26.88■■□□□ 1.89
SHANK2-220ENST00000608988 STX6O43752 255 aa26.87■■□□□ 1.89
SHANK2-220ENST00000608988 DNTTIP2Q5QJE6 756 aaKnown RBP26.87■■□□□ 1.89
SHANK2-220ENST00000608988 KDM4AO75164 1064 aa26.87■■□□□ 1.89
SHANK2-220ENST00000608988 UBTFL1P0CB47 393 aaPredicted RBP26.87■■□□□ 1.89
SHANK2-220ENST00000608988 POLA2Q14181 598 aa26.87■■□□□ 1.89
SHANK2-220ENST00000608988 UNC5CLQ8IV45 518 aa26.87■■□□□ 1.89
SHANK2-220ENST00000608988 PTPRUQ92729 1446 aa26.86■■□□□ 1.89
SHANK2-220ENST00000608988 F13A1P00488 732 aa26.86■■□□□ 1.89
SHANK2-220ENST00000608988 USP25Q9UHP3 1055 aa26.86■■□□□ 1.89
SHANK2-220ENST00000608988 SNX14Q9Y5W7 946 aa26.86■■□□□ 1.89
SHANK2-220ENST00000608988 USP42Q9H9J4 1324 aaKnown RBP26.85■■□□□ 1.89
SHANK2-220ENST00000608988 CNTROBQ8N137 903 aa26.85■■□□□ 1.89
SHANK2-220ENST00000608988 LSG1Q9H089 658 aaKnown RBP26.85■■□□□ 1.89
SHANK2-220ENST00000608988 GDPD2Q9HCC8 539 aa26.85■■□□□ 1.89
SHANK2-220ENST00000608988 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.85■■□□□ 1.89
SHANK2-220ENST00000608988 MAP3K5Q99683 1374 aa26.85■■□□□ 1.89
SHANK2-220ENST00000608988 ZSCAN31Q96LW9 406 aaPredicted RBP26.85■■□□□ 1.89
SHANK2-220ENST00000608988 CNPY2Q9Y2B0 182 aa26.85■■□□□ 1.89
SHANK2-220ENST00000608988 PI4K2BQ8TCG2 481 aa26.84■■□□□ 1.89
SHANK2-220ENST00000608988 FUCA2Q9BTY2 467 aa26.84■■□□□ 1.89
SHANK2-220ENST00000608988 USP44Q9H0E7 712 aa26.84■■□□□ 1.89
SHANK2-220ENST00000608988 SMC3Q9UQE7 1217 aa26.84■■□□□ 1.89
SHANK2-220ENST00000608988 RIMS1Q86UR5 1692 aaKnown RBP26.84■■□□□ 1.89
SHANK2-220ENST00000608988 ROBO2Q9HCK4 1378 aa26.84■■□□□ 1.89
SHANK2-220ENST00000608988 HSP90AB4PQ58FF6 505 aa26.83■■□□□ 1.89
SHANK2-220ENST00000608988 KIF1BPQ96EK5 621 aa26.83■■□□□ 1.89
SHANK2-220ENST00000608988 FOXO3O43524 673 aa26.83■■□□□ 1.88
SHANK2-220ENST00000608988 SYT1P21579 422 aa26.83■■□□□ 1.88
SHANK2-220ENST00000608988 CHMP4AQ9BY43 222 aa26.83■■□□□ 1.88
SHANK2-220ENST00000608988 PRDM4Q9UKN5 801 aa26.83■■□□□ 1.88
SHANK2-220ENST00000608988 SH2B1Q9NRF2 756 aaPredicted RBP26.82■■□□□ 1.88
SHANK2-220ENST00000608988 AK2P54819 239 aa26.81■■□□□ 1.88
SHANK2-220ENST00000608988 TM6SF1Q9BZW5 370 aa26.81■■□□□ 1.88
SHANK2-220ENST00000608988 GNAT3A8MTJ3 354 aa26.81■■□□□ 1.88
SHANK2-220ENST00000608988 HCLS1P14317 486 aaPredicted RBP26.81■■□□□ 1.88
SHANK2-220ENST00000608988 RHPN1Q8TCX5 695 aa26.81■■□□□ 1.88
SHANK2-220ENST00000608988 RUFY2Q8WXA3 655 aa26.81■■□□□ 1.88
SHANK2-220ENST00000608988 CEP170BQ9Y4F5 1589 aaPredicted RBP26.8■■□□□ 1.88
SHANK2-220ENST00000608988 TTC41PQ6P2S7 1318 aa26.8■■□□□ 1.88
SHANK2-220ENST00000608988 GOLGA6L6A8MZA4 724 aa26.8■■□□□ 1.88
SHANK2-220ENST00000608988 RUFY3Q7L099 469 aa26.8■■□□□ 1.88
SHANK2-220ENST00000608988 TCHHQ07283 1943 aa26.8■■□□□ 1.88
SHANK2-220ENST00000608988 KCNB2Q92953 911 aa26.79■■□□□ 1.88
SHANK2-220ENST00000608988 UTP14CQ5TAP6 766 aaKnown RBP26.79■■□□□ 1.88
SHANK2-220ENST00000608988 VPS53Q5VIR6 699 aa26.79■■□□□ 1.88
SHANK2-220ENST00000608988 IL25Q9H293 177 aa26.79■■□□□ 1.88
SHANK2-220ENST00000608988 DIAPH3Q9NSV4 1193 aa26.79■■□□□ 1.88
SHANK2-220ENST00000608988 KIF3AQ9Y496 699 aa26.79■■□□□ 1.88
SHANK2-220ENST00000608988 EYA1Q99502 592 aa26.77■■□□□ 1.88
SHANK2-220ENST00000608988 SURF6O75683 361 aaKnown RBP26.76■■□□□ 1.88
SHANK2-220ENST00000608988 FOXD4L6Q3SYB3 417 aaPredicted RBP26.76■■□□□ 1.88
SHANK2-220ENST00000608988 FOXD4L3Q6VB84 417 aaPredicted RBP26.76■■□□□ 1.88
SHANK2-220ENST00000608988 ADAMTS13Q76LX8 1427 aa26.76■■□□□ 1.88
SHANK2-220ENST00000608988 CHD2O14647 1828 aaKnown RBP26.76■■□□□ 1.87
SHANK2-220ENST00000608988 TMEM2Q9UHN6 1383 aa26.76■■□□□ 1.87
SHANK2-220ENST00000608988 TAF7Q15545 349 aaPredicted RBP26.76■■□□□ 1.87
SHANK2-220ENST00000608988 PPP1R42Q7Z4L9 355 aa26.76■■□□□ 1.87
SHANK2-220ENST00000608988 NUTM1Q86Y26 1132 aa26.76■■□□□ 1.87
SHANK2-220ENST00000608988 TTC12Q9H892 705 aaPredicted RBP26.76■■□□□ 1.87
SHANK2-220ENST00000608988 IL1RAPL2Q9NP60 686 aa26.76■■□□□ 1.87
SHANK2-220ENST00000608988 GLRX3O76003 335 aaKnown RBP26.75■■□□□ 1.87
SHANK2-220ENST00000608988 CHAF1AQ13111 956 aaPredicted RBP26.75■■□□□ 1.87
SHANK2-220ENST00000608988 KIAA1524Q8TCG1 905 aa26.75■■□□□ 1.87
SHANK2-220ENST00000608988 HYPKQ9NX55 129 aa26.75■■□□□ 1.87
SHANK2-220ENST00000608988 CCDC192P0DO97 292 aa26.74■■□□□ 1.87
SHANK2-220ENST00000608988 CCDC171Q6TFL3 1326 aa26.74■■□□□ 1.87
SHANK2-220ENST00000608988 MTMR6Q9Y217 621 aa26.74■■□□□ 1.87
SHANK2-220ENST00000608988 UBR1Q8IWV7 1749 aa26.73■■□□□ 1.87
SHANK2-220ENST00000608988 ZNF830Q96NB3 372 aaPredicted RBP26.73■■□□□ 1.87
SHANK2-220ENST00000608988 USP54Q70EL1 1684 aa26.72■■□□□ 1.87
SHANK2-220ENST00000608988 FIBPO43427 364 aa26.72■■□□□ 1.87
SHANK2-220ENST00000608988 HOXB7P09629 217 aa26.72■■□□□ 1.87
SHANK2-220ENST00000608988 AMPHP49418 695 aa26.72■■□□□ 1.87
SHANK2-220ENST00000608988 RASEFQ8IZ41 740 aa26.72■■□□□ 1.87
SHANK2-220ENST00000608988 ZNF710Q8N1W2 664 aa26.72■■□□□ 1.87
SHANK2-220ENST00000608988 ZSWIM6Q9HCJ5 1215 aa26.72■■□□□ 1.87
SHANK2-220ENST00000608988 ELP1O95163 1332 aa26.72■■□□□ 1.87
SHANK2-220ENST00000608988 GJB2P29033 226 aa26.71■■□□□ 1.87
SHANK2-220ENST00000608988 PDRG1Q9NUG6 133 aa26.71■■□□□ 1.87
SHANK2-220ENST00000608988 PLEKHG1Q9ULL1 1385 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms