RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 A0A0G2JLW4 131 aa17.83■□□□□ 0.44
CTSA-213ENST00000606782 ZPR1O75312 459 aa17.83■□□□□ 0.44
CTSA-213ENST00000606782 TEX13AQ9BXU3 409 aaPredicted RBP17.83■□□□□ 0.44
CTSA-213ENST00000606782 COL15A1P39059 1388 aa17.82■□□□□ 0.44
CTSA-213ENST00000606782 HEG1Q9ULI3 1381 aa17.82■□□□□ 0.44
CTSA-213ENST00000606782 STARD3NLO95772 234 aa17.82■□□□□ 0.44
CTSA-213ENST00000606782 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
CTSA-213ENST00000606782 KCNA3P22001 575 aa17.82■□□□□ 0.44
CTSA-213ENST00000606782 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
CTSA-213ENST00000606782 USPL1Q5W0Q7 1092 aa17.82■□□□□ 0.44
CTSA-213ENST00000606782 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
CTSA-213ENST00000606782 DPEP1P16444 411 aa17.81■□□□□ 0.44
CTSA-213ENST00000606782 EIF5P55010 431 aaKnown RBP17.81■□□□□ 0.44
CTSA-213ENST00000606782 N4BP2Q86UW6 1770 aaPredicted RBP17.81■□□□□ 0.44
CTSA-213ENST00000606782 HTATSF1O43719 755 aaKnown RBP17.8■□□□□ 0.44
CTSA-213ENST00000606782 C1QTNF8P60827 252 aa17.8■□□□□ 0.44
CTSA-213ENST00000606782 BCL2L12Q9HB09 334 aa17.8■□□□□ 0.44
CTSA-213ENST00000606782 WWC3Q9ULE0 1092 aa17.8■□□□□ 0.44
CTSA-213ENST00000606782 BRCA1P38398 1863 aaKnown RBP17.8■□□□□ 0.44
CTSA-213ENST00000606782 FMNL2Q96PY5 1086 aa17.79■□□□□ 0.44
CTSA-213ENST00000606782 ATP10DQ9P241 1426 aa17.79■□□□□ 0.44
CTSA-213ENST00000606782 A0A087WZG4 1122 aa17.78■□□□□ 0.44
CTSA-213ENST00000606782 NFIXQ14938 502 aa17.78■□□□□ 0.44
CTSA-213ENST00000606782 BTBD11A6QL63 1104 aa17.77■□□□□ 0.44
CTSA-213ENST00000606782 GIGYF1O75420 1035 aaPredicted RBP17.77■□□□□ 0.44
CTSA-213ENST00000606782 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
CTSA-213ENST00000606782 BCS1LQ9Y276 419 aa17.77■□□□□ 0.44
CTSA-213ENST00000606782 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
CTSA-213ENST00000606782 KCNQ3O43525 872 aa17.76■□□□□ 0.43
CTSA-213ENST00000606782 IL6STP40189 918 aaPredicted RBP17.76■□□□□ 0.43
CTSA-213ENST00000606782 RTF1Q92541 710 aaKnown RBP17.76■□□□□ 0.43
CTSA-213ENST00000606782 PIM2Q9P1W9 311 aa17.76■□□□□ 0.43
CTSA-213ENST00000606782 MCM10Q7L590 875 aa17.74■□□□□ 0.43
CTSA-213ENST00000606782 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
CTSA-213ENST00000606782 ARFGEF1Q9Y6D6 1849 aa17.74■□□□□ 0.43
CTSA-213ENST00000606782 AFDNP55196 1824 aaKnown RBP17.73■□□□□ 0.43
CTSA-213ENST00000606782 A1BGP04217 495 aa17.73■□□□□ 0.43
CTSA-213ENST00000606782 SERPINB2P05120 415 aa17.73■□□□□ 0.43
CTSA-213ENST00000606782 DALRD3Q5D0E6 543 aaKnown RBP17.72■□□□□ 0.43
CTSA-213ENST00000606782 GPBP1L1Q9HC44 474 aaPredicted RBP17.72■□□□□ 0.43
CTSA-213ENST00000606782 USP16Q9Y5T5 823 aa17.72■□□□□ 0.43
CTSA-213ENST00000606782 SNRPA1P09661 255 aaKnown RBP17.71■□□□□ 0.43
CTSA-213ENST00000606782 CHRNA5P30532 468 aa17.71■□□□□ 0.43
CTSA-213ENST00000606782 DCTN1Q14203 1278 aa17.71■□□□□ 0.43
CTSA-213ENST00000606782 RALBP1Q15311 655 aa17.71■□□□□ 0.43
CTSA-213ENST00000606782 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
CTSA-213ENST00000606782 ARHGAP27Q6ZUM4 889 aa17.71■□□□□ 0.43
CTSA-213ENST00000606782 TBC1D2BQ9UPU7 963 aa17.7■□□□□ 0.42
CTSA-213ENST00000606782 SCN7AQ01118 1682 aa17.69■□□□□ 0.42
CTSA-213ENST00000606782 CAMTA2O94983 1202 aa17.69■□□□□ 0.42
CTSA-213ENST00000606782 NEFMP07197 916 aa17.69■□□□□ 0.42
CTSA-213ENST00000606782 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
CTSA-213ENST00000606782 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
CTSA-213ENST00000606782 PRAMEF22A3QJZ6 481 aa17.68■□□□□ 0.42
CTSA-213ENST00000606782 RGL2O15211 777 aa17.68■□□□□ 0.42
CTSA-213ENST00000606782 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
CTSA-213ENST00000606782 CLEC4GQ6UXB4 293 aa17.67■□□□□ 0.42
CTSA-213ENST00000606782 PRKRIP1Q9H875 184 aaPredicted RBP17.67■□□□□ 0.42
CTSA-213ENST00000606782 PDZRN3Q9UPQ7 1066 aa17.67■□□□□ 0.42
CTSA-213ENST00000606782 DLG5Q8TDM6 1919 aa17.66■□□□□ 0.42
CTSA-213ENST00000606782 BICDL1Q6ZP65 573 aa17.66■□□□□ 0.42
CTSA-213ENST00000606782 NPM2Q86SE8 214 aaKnown RBP17.66■□□□□ 0.42
CTSA-213ENST00000606782 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
CTSA-213ENST00000606782 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
CTSA-213ENST00000606782 BRIP1Q9BX63 1249 aa17.66■□□□□ 0.42
CTSA-213ENST00000606782 DLEC1Q9Y238 1755 aa17.66■□□□□ 0.42
CTSA-213ENST00000606782 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
CTSA-213ENST00000606782 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
CTSA-213ENST00000606782 NBPF26B4DH59 902 aa17.65■□□□□ 0.42
CTSA-213ENST00000606782 KIF3CO14782 793 aa17.65■□□□□ 0.42
CTSA-213ENST00000606782 PRR5LQ6MZQ0 368 aa17.65■□□□□ 0.42
CTSA-213ENST00000606782 NBPF10Q6P3W6 841 aaKnown RBP17.65■□□□□ 0.42
CTSA-213ENST00000606782 NBPF15Q8N660 670 aa17.65■□□□□ 0.42
CTSA-213ENST00000606782 ZNF526Q8TF50 670 aaPredicted RBP17.65■□□□□ 0.42
CTSA-213ENST00000606782 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
CTSA-213ENST00000606782 H0YIN7 160 aa17.64■□□□□ 0.41
CTSA-213ENST00000606782 C9orf131Q5VYM1 1079 aa17.64■□□□□ 0.41
CTSA-213ENST00000606782 C2CD5Q86YS7 1000 aa17.64■□□□□ 0.41
CTSA-213ENST00000606782 TTLL6Q8N841 843 aa17.64■□□□□ 0.41
CTSA-213ENST00000606782 SETDB2Q96T68 719 aa17.64■□□□□ 0.41
CTSA-213ENST00000606782 BCORQ6W2J9 1755 aa17.63■□□□□ 0.41
CTSA-213ENST00000606782 PDE6BP35913 854 aa17.63■□□□□ 0.41
CTSA-213ENST00000606782 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
CTSA-213ENST00000606782 ANKRD31Q8N7Z5 1873 aa17.63■□□□□ 0.41
CTSA-213ENST00000606782 KDM3BQ7LBC6 1761 aa17.62■□□□□ 0.41
CTSA-213ENST00000606782 ANP32CO43423 234 aa17.62■□□□□ 0.41
CTSA-213ENST00000606782 PIP4K2AP48426 406 aaPredicted RBP17.62■□□□□ 0.41
CTSA-213ENST00000606782 DIEXFQ68CQ4 756 aaKnown RBP17.62■□□□□ 0.41
CTSA-213ENST00000606782 MAPK8IP3Q9UPT6 1336 aa17.62■□□□□ 0.41
CTSA-213ENST00000606782 SBF1O95248 1867 aa17.62■□□□□ 0.41
CTSA-213ENST00000606782 EIF4A1P60842 406 aaKnown RBP17.61■□□□□ 0.41
CTSA-213ENST00000606782 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
CTSA-213ENST00000606782 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
CTSA-213ENST00000606782 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
CTSA-213ENST00000606782 ZC3H4Q9UPT8 1303 aaKnown RBP17.59■□□□□ 0.41
CTSA-213ENST00000606782 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
CTSA-213ENST00000606782 BABAM1Q9NWV8 329 aa17.59■□□□□ 0.41
CTSA-213ENST00000606782 RNF181Q9P0P0 153 aa17.59■□□□□ 0.41
CTSA-213ENST00000606782 LAMB4A4D0S4 1761 aa17.58■□□□□ 0.41
CTSA-213ENST00000606782 KLRG2A4D1S0 409 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms