RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	CCDC96	Q2M329	555 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	C10orf67	Q8IYJ2	551 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	LRRC43	Q8N309	656 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	EIF3A	Q14152	1382 aa	Known RBP	4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NDC80	O14777	642 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	STIM1	Q13586	685 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NECTIN2	Q92692	538 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	EPB41L2	O43491	1005 aa	Known RBP	4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SETDB1	Q15047	1291 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CEP135	Q66GS9	1140 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PLIN1	O60240	522 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SPECC1L	Q69YQ0	1117 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SARNP	P82979	210 aa	Known RBP	4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	IFIT2	P09913	472 aa	Known RBP	4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TSNARE1	Q96NA8	513 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	FSD2	A1L4K1	749 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	GOLIM4	O00461	696 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	DYNC1I1	O14576	645 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TDO2	P48775	406 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ARHGAP29	Q52LW3	1261 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	LARP1	Q6PKG0	1096 aa	Known RBP	4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	DZIP1L	Q8IYY4	767 aa	Known RBP	4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NUP155	O75694	1391 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PLEKHG2	Q9H7P9	1386 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624		A0A1W2PRG0	241 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ELL2	O00472	640 aa	Predicted RBP	4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PPFIA2	O75334	1257 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MAP9	Q49MG5	647 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NAA16	Q6N069	864 aa	Predicted RBP	4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZNF354C	Q86Y25	554 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SCLT1	Q96NL6	688 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	HYPK	Q9NX55	129 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RAI14	Q9P0K7	980 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ARHGAP23	Q9P227	1491 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CETN2	P41208	172 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TMF1	P82094	1093 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PIK3C2B	O00750	1634 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PFDN4	Q9NQP4	134 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SSB	P05455	408 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	WASHC4	Q2M389	1173 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	OTUD6B	Q8N6M0	293 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MPHOSPH9	Q99550	1183 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624		A0A1B0GUL7	405 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	KIF20A	O95235	890 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	STMN1	P16949	149 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RSPH3	Q86UC2	560 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC89	Q8N998	374 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ANAPC4	Q9UJX5	808 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ARHGAP5	Q13017	1502 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CNTRL	Q7Z7A1	2325 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	POTEJ	P0CG39	1038 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ATP6V1E1	P36543	226 aa		4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.75	□□□□□ -1.65
KCNMA1-223	ENST00000604624	OPA1	O60313	960 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	LMAN1	P49257	510 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	WDR63	Q8IWG1	891 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CXorf38	Q8TB03	319 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	DCAF11	Q8TEB1	546 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NUTM2F	A1L443	756 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ATXN8OS	P0DMR3	200 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MSL1	Q68DK7	614 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SREK1	Q8WXA9	508 aa	Known RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TAF4B	Q92750	862 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	IQCG	Q9H095	443 aa	Known RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NIN	Q8N4C6	2090 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SETBP1	Q9Y6X0	1596 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	HSPA4	P34932	840 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	EVA1C	P58658	441 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SART3	Q15020	963 aa	Known RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PDCL2	Q8N4E4	241 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	UBXN4	Q92575	508 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NEUROD6	Q96NK8	337 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PPP1R12A	O14974	1030 aa	Predicted RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	DDX27	Q96GQ7	796 aa	Known RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	XAB2	Q9HCS7	855 aa	Known RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ERC2	O15083	957 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	EIF2S2	P20042	333 aa	Known RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	AMPH	P49418	695 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PRPF4B	Q13523	1007 aa	Known RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZNF397	Q8NF99	534 aa	Predicted RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PIK3R4	Q99570	1358 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ADGB	Q8N7X0	1667 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MED14	O60244	1454 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PIP4K2A	P48426	406 aa	Predicted RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	GEN1	Q17RS7	908 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC148	Q8NFR7	591 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TET3	O43151	1660 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	EIF5	P55010	431 aa	Known RBP	4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	FAM160A1	Q05DH4	1040 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	FIBP	O43427	364 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	KIF5A	Q12840	1032 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC63	Q8NA47	563 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	STMN2	Q93045	179 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TRIM55	Q9BYV6	548 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ANLN	Q9NQW6	1124 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CALCOCO1	Q9P1Z2	691 aa		4.74	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ADGRB1	O14514	1584 aa		4.73	□□□□□ -1.65

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