RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 IRF6O14896 467 aa12.69□□□□□ -0.38
SH3D19-212ENST00000604440 CD2BP2O95400 341 aaKnown RBP12.69□□□□□ -0.38
SH3D19-212ENST00000604440 CFAP70Q5T0N1 1121 aa12.69□□□□□ -0.38
SH3D19-212ENST00000604440 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
SH3D19-212ENST00000604440 Q3C1V9 767 aa12.67□□□□□ -0.38
SH3D19-212ENST00000604440 NRAPQ86VF7 1730 aa12.66□□□□□ -0.38
SH3D19-212ENST00000604440 KDM4AO75164 1064 aa12.66□□□□□ -0.38
SH3D19-212ENST00000604440 MDM2Q00987 491 aaPredicted RBP12.66□□□□□ -0.38
SH3D19-212ENST00000604440 CRIPAKQ8N1N5 446 aa12.66□□□□□ -0.38
SH3D19-212ENST00000604440 MMP16P51512 607 aa12.65□□□□□ -0.38
SH3D19-212ENST00000604440 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
SH3D19-212ENST00000604440 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.38
SH3D19-212ENST00000604440 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
SH3D19-212ENST00000604440 YTHDC2Q9H6S0 1430 aaKnown RBP12.64□□□□□ -0.39
SH3D19-212ENST00000604440 TULP1O00294 542 aaPredicted RBP12.64□□□□□ -0.39
SH3D19-212ENST00000604440 AVPP01185 164 aa12.64□□□□□ -0.39
SH3D19-212ENST00000604440 LRPPRCP42704 1394 aaKnown RBP12.64□□□□□ -0.39
SH3D19-212ENST00000604440 RGPD1P0DJD0 1748 aa12.63□□□□□ -0.39
SH3D19-212ENST00000604440 UNC5CLQ8IV45 518 aa12.63□□□□□ -0.39
SH3D19-212ENST00000604440 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
SH3D19-212ENST00000604440 CYP4X1Q8N118 509 aa12.63□□□□□ -0.39
SH3D19-212ENST00000604440 HLA-CQ95604 372 aa12.63□□□□□ -0.39
SH3D19-212ENST00000604440 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
SH3D19-212ENST00000604440 PLEKHH1Q9ULM0 1364 aa12.63□□□□□ -0.39
SH3D19-212ENST00000604440 TNS1Q9HBL0 1735 aaKnown RBP12.62□□□□□ -0.39
SH3D19-212ENST00000604440 RGPD8O14715 1765 aaPredicted RBP12.62□□□□□ -0.39
SH3D19-212ENST00000604440 ADGRB1O14514 1584 aa12.62□□□□□ -0.39
SH3D19-212ENST00000604440 ZBTB24O43167 697 aaPredicted RBP12.62□□□□□ -0.39
SH3D19-212ENST00000604440 WAPLQ7Z5K2 1190 aa12.62□□□□□ -0.39
SH3D19-212ENST00000604440 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
SH3D19-212ENST00000604440 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
SH3D19-212ENST00000604440 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
SH3D19-212ENST00000604440 TRIM32Q13049 653 aa12.61□□□□□ -0.39
SH3D19-212ENST00000604440 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
SH3D19-212ENST00000604440 USB1Q9BQ65 265 aaKnown RBP12.61□□□□□ -0.39
SH3D19-212ENST00000604440 TRAK1Q9UPV9 953 aa12.61□□□□□ -0.39
SH3D19-212ENST00000604440 TNS3Q68CZ2 1445 aa12.61□□□□□ -0.39
SH3D19-212ENST00000604440 HOXA2O43364 376 aa12.6□□□□□ -0.39
SH3D19-212ENST00000604440 USP46P62068 366 aa12.6□□□□□ -0.39
SH3D19-212ENST00000604440 ESCO1Q5FWF5 840 aa12.6□□□□□ -0.39
SH3D19-212ENST00000604440 DEFB132Q7Z7B7 95 aa12.6□□□□□ -0.39
SH3D19-212ENST00000604440 CRYBG1Q9Y4K1 1723 aa12.59□□□□□ -0.39
SH3D19-212ENST00000604440 ABCC11Q96J66 1382 aa12.59□□□□□ -0.39
SH3D19-212ENST00000604440 THSD7AQ9UPZ6 1657 aa12.59□□□□□ -0.39
SH3D19-212ENST00000604440 FOXO3O43524 673 aa12.59□□□□□ -0.39
SH3D19-212ENST00000604440 VPS72Q15906 364 aa12.59□□□□□ -0.39
SH3D19-212ENST00000604440 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
SH3D19-212ENST00000604440 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
SH3D19-212ENST00000604440 DISP2A7MBM2 1401 aa12.59□□□□□ -0.39
SH3D19-212ENST00000604440 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
SH3D19-212ENST00000604440 KIAA1210Q9ULL0 1709 aa12.59□□□□□ -0.39
SH3D19-212ENST00000604440 WNT7AO00755 349 aa12.58□□□□□ -0.4
SH3D19-212ENST00000604440 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
SH3D19-212ENST00000604440 DACH1Q9UI36 760 aa12.58□□□□□ -0.4
SH3D19-212ENST00000604440 TRPM1Q7Z4N2 1603 aa12.58□□□□□ -0.4
SH3D19-212ENST00000604440 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
SH3D19-212ENST00000604440 ARHGEF28Q8N1W1 1705 aaKnown RBP12.57□□□□□ -0.4
SH3D19-212ENST00000604440 XPCQ01831 940 aaPredicted RBP12.57□□□□□ -0.4
SH3D19-212ENST00000604440 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
SH3D19-212ENST00000604440 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
SH3D19-212ENST00000604440 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
SH3D19-212ENST00000604440 CTC1Q2NKJ3 1217 aa12.56□□□□□ -0.4
SH3D19-212ENST00000604440 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
SH3D19-212ENST00000604440 SEPT12Q8IYM1 358 aa12.56□□□□□ -0.4
SH3D19-212ENST00000604440 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
SH3D19-212ENST00000604440 POGKQ9P215 609 aa12.56□□□□□ -0.4
SH3D19-212ENST00000604440 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
SH3D19-212ENST00000604440 SMCPP49901 116 aaPredicted RBP12.55□□□□□ -0.4
SH3D19-212ENST00000604440 GUCA2AQ02747 115 aa12.55□□□□□ -0.4
SH3D19-212ENST00000604440 HIRIP3Q9BW71 556 aaPredicted RBP12.55□□□□□ -0.4
SH3D19-212ENST00000604440 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
SH3D19-212ENST00000604440 RREB1Q92766 1687 aa12.54□□□□□ -0.4
SH3D19-212ENST00000604440 TTC24A2A3L6 582 aaPredicted RBP12.54□□□□□ -0.4
SH3D19-212ENST00000604440 AXIN1O15169 862 aa12.54□□□□□ -0.4
SH3D19-212ENST00000604440 CLCN1P35523 988 aa12.54□□□□□ -0.4
SH3D19-212ENST00000604440 SF3B2Q13435 895 aaKnown RBP12.54□□□□□ -0.4
SH3D19-212ENST00000604440 ROCK2O75116 1388 aaKnown RBP12.54□□□□□ -0.4
SH3D19-212ENST00000604440 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
SH3D19-212ENST00000604440 MRGPRX2Q96LB1 330 aa12.53□□□□□ -0.4
SH3D19-212ENST00000604440 ARHGEF10O15013 1369 aa12.53□□□□□ -0.4
SH3D19-212ENST00000604440 SMPD1P17405 629 aa12.52□□□□□ -0.41
SH3D19-212ENST00000604440 SNIP1Q8TAD8 396 aaKnown RBP12.52□□□□□ -0.41
SH3D19-212ENST00000604440 KRT28Q7Z3Y7 464 aa12.51□□□□□ -0.41
SH3D19-212ENST00000604440 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
SH3D19-212ENST00000604440 ANKARQ7Z5J8 1434 aa12.51□□□□□ -0.41
SH3D19-212ENST00000604440 BAG6P46379 1132 aa12.5□□□□□ -0.41
SH3D19-212ENST00000604440 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
SH3D19-212ENST00000604440 QRICH2Q9H0J4 1663 aa12.5□□□□□ -0.41
SH3D19-212ENST00000604440 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
SH3D19-212ENST00000604440 LCE2AQ5TA79 106 aaPredicted RBP12.49□□□□□ -0.41
SH3D19-212ENST00000604440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
SH3D19-212ENST00000604440 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
SH3D19-212ENST00000604440 SYMPKQ92797 1274 aaKnown RBP12.49□□□□□ -0.41
SH3D19-212ENST00000604440 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
SH3D19-212ENST00000604440 JUNDP17535 347 aa12.48□□□□□ -0.41
SH3D19-212ENST00000604440 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
SH3D19-212ENST00000604440 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
SH3D19-212ENST00000604440 J3QL48 77 aa12.47□□□□□ -0.41
SH3D19-212ENST00000604440 SKOR1P84550 965 aa12.47□□□□□ -0.41
SH3D19-212ENST00000604440 PSME1Q06323 249 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms