RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 GYS1P13807 737 aa15.2■□□□□ 0.02
CCDC12-209ENST00000604164 RIPK4P57078 832 aa15.2■□□□□ 0.02
CCDC12-209ENST00000604164 DCTN1Q14203 1278 aa15.2■□□□□ 0.02
CCDC12-209ENST00000604164 RUNDC1Q96C34 613 aa15.2■□□□□ 0.02
CCDC12-209ENST00000604164 MYH14Q7Z406 1995 aaKnown RBP15.19■□□□□ 0.02
CCDC12-209ENST00000604164 ANP32CO43423 234 aa15.19■□□□□ 0.02
CCDC12-209ENST00000604164 ZBTB1Q9Y2K1 713 aa15.19■□□□□ 0.02
CCDC12-209ENST00000604164 PARP3Q9Y6F1 533 aa15.19■□□□□ 0.02
CCDC12-209ENST00000604164 COL15A1P39059 1388 aa15.19■□□□□ 0.02
CCDC12-209ENST00000604164 CANXP27824 592 aaKnown RBP15.18■□□□□ 0.02
CCDC12-209ENST00000604164 TMPOP42166 694 aaKnown RBP15.18■□□□□ 0.02
CCDC12-209ENST00000604164 GPR162Q16538 588 aa15.18■□□□□ 0.02
CCDC12-209ENST00000604164 BABAM1Q9NWV8 329 aa15.18■□□□□ 0.02
CCDC12-209ENST00000604164 NARFQ9UHQ1 456 aa15.18■□□□□ 0.02
CCDC12-209ENST00000604164 IL6STP40189 918 aaPredicted RBP15.17■□□□□ 0.02
CCDC12-209ENST00000604164 ADAMTS8Q9UP79 889 aa15.17■□□□□ 0.02
CCDC12-209ENST00000604164 KCNQ3O43525 872 aa15.16■□□□□ 0.02
CCDC12-209ENST00000604164 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
CCDC12-209ENST00000604164 C4AP0C0L4 1744 aa15.15■□□□□ 0.02
CCDC12-209ENST00000604164 GRIN3BO60391 1043 aa15.15■□□□□ 0.02
CCDC12-209ENST00000604164 USPL1Q5W0Q7 1092 aa15.15■□□□□ 0.02
CCDC12-209ENST00000604164 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
CCDC12-209ENST00000604164 NLGN2Q8NFZ4 835 aa15.15■□□□□ 0.02
CCDC12-209ENST00000604164 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
CCDC12-209ENST00000604164 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
CCDC12-209ENST00000604164 TGFB2P61812 414 aa15.14■□□□□ 0.01
CCDC12-209ENST00000604164 FKBP8Q14318 412 aa15.14■□□□□ 0.01
CCDC12-209ENST00000604164 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
CCDC12-209ENST00000604164 ZNF330Q9Y3S2 320 aaPredicted RBP15.14■□□□□ 0.01
CCDC12-209ENST00000604164 A1BGP04217 495 aa15.13■□□□□ 0.01
CCDC12-209ENST00000604164 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
CCDC12-209ENST00000604164 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
CCDC12-209ENST00000604164 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
CCDC12-209ENST00000604164 TSPYL4Q9UJ04 414 aa15.13■□□□□ 0.01
CCDC12-209ENST00000604164 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
CCDC12-209ENST00000604164 YY1P25490 414 aa15.12■□□□□ 0.01
CCDC12-209ENST00000604164 EIF4A1P60842 406 aaKnown RBP15.12■□□□□ 0.01
CCDC12-209ENST00000604164 CALD1Q05682 793 aaKnown RBP15.12■□□□□ 0.01
CCDC12-209ENST00000604164 GIGYF1O75420 1035 aaPredicted RBP15.11■□□□□ 0.01
CCDC12-209ENST00000604164 TM4SF1P30408 202 aa15.11■□□□□ 0.01
CCDC12-209ENST00000604164 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
CCDC12-209ENST00000604164 C10orf71Q711Q0 1435 aa15.1■□□□□ 0.01
CCDC12-209ENST00000604164 POLRMTO00411 1230 aaKnown RBP15.1■□□□□ 0.01
CCDC12-209ENST00000604164 RGL2O15211 777 aa15.1■□□□□ 0.01
CCDC12-209ENST00000604164 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
CCDC12-209ENST00000604164 ZNF652Q9Y2D9 606 aa15.1■□□□□ 0.01
CCDC12-209ENST00000604164 NFIXQ14938 502 aa15.09■□□□□ 0.01
CCDC12-209ENST00000604164 CLEC4GQ6UXB4 293 aa15.09■□□□□ 0.01
CCDC12-209ENST00000604164 MRS2Q9HD23 443 aa15.09■□□□□ 0.01
CCDC12-209ENST00000604164 TBC1D2BQ9UPU7 963 aa15.09■□□□□ 0.01
CCDC12-209ENST00000604164 ERBB4Q15303 1308 aa15.09■□□□□ 0.01
CCDC12-209ENST00000604164 KDM3BQ7LBC6 1761 aa15.08■□□□□ 0.01
CCDC12-209ENST00000604164 PRAMEF22A3QJZ6 481 aa15.08■□□□□ 0
CCDC12-209ENST00000604164 DDR1Q08345 913 aa15.08■□□□□ 0
CCDC12-209ENST00000604164 TRIM35Q9UPQ4 493 aa15.08■□□□□ 0
CCDC12-209ENST00000604164 CHL1O00533 1208 aa15.07■□□□□ 0
CCDC12-209ENST00000604164 APAF1O14727 1248 aa15.07■□□□□ 0
CCDC12-209ENST00000604164 SETDB2Q96T68 719 aa15.07■□□□□ 0
CCDC12-209ENST00000604164 BCL2L12Q9HB09 334 aa15.07■□□□□ 0
CCDC12-209ENST00000604164 KIF13BQ9NQT8 1826 aa15.06■□□□□ 0
CCDC12-209ENST00000604164 NPHP1O15259 732 aa15.06■□□□□ 0
CCDC12-209ENST00000604164 CAMTA2O94983 1202 aa15.06■□□□□ 0
CCDC12-209ENST00000604164 SERPINB2P05120 415 aa15.06■□□□□ 0
CCDC12-209ENST00000604164 YBX3P16989 372 aaKnown RBP eCLIP15.06■□□□□ 0
CCDC12-209ENST00000604164 PDZRN3Q9UPQ7 1066 aa15.06■□□□□ 0
CCDC12-209ENST00000604164 LAS1LQ9Y4W2 734 aaKnown RBP15.06■□□□□ 0
CCDC12-209ENST00000604164 CARMIL3Q8ND23 1372 aa15.06■□□□□ 0
CCDC12-209ENST00000604164 PXDNLA1KZ92 1463 aa15.06■□□□□ 0
CCDC12-209ENST00000604164 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
CCDC12-209ENST00000604164 BICDL1Q6ZP65 573 aa15.05■□□□□ -0
CCDC12-209ENST00000604164 CFAP44Q96MT7 982 aa15.05■□□□□ -0
CCDC12-209ENST00000604164 SCN7AQ01118 1682 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 A0A0G2JLW4 131 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 NBPF26B4DH59 902 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 HOXB7P09629 217 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 DPEP1P16444 411 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 PIP4K2AP48426 406 aaPredicted RBP15.04■□□□□ -0
CCDC12-209ENST00000604164 TBC1D9BQ66K14 1250 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 NBPF10Q6P3W6 841 aaKnown RBP15.04■□□□□ -0
CCDC12-209ENST00000604164 KIF6Q6ZMV9 814 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 NBPF15Q8N660 670 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 CHMP4AQ9BY43 222 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 PIM2Q9P1W9 311 aa15.04■□□□□ -0
CCDC12-209ENST00000604164 ERVV-1B6SEH8 477 aa15.03■□□□□ -0
CCDC12-209ENST00000604164 GNAI1P63096 354 aa15.03■□□□□ -0
CCDC12-209ENST00000604164 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
CCDC12-209ENST00000604164 IFT57Q9NWB7 429 aa15.03■□□□□ -0
CCDC12-209ENST00000604164 CHD4Q14839 1912 aa15.02■□□□□ -0
CCDC12-209ENST00000604164 PDE6BP35913 854 aa15.02■□□□□ -0
CCDC12-209ENST00000604164 ST5P78524 1137 aa15.02■□□□□ -0
CCDC12-209ENST00000604164 CCDC184Q52MB2 194 aa15.02■□□□□ -0
CCDC12-209ENST00000604164 CNBD1Q8NA66 436 aa15.02■□□□□ -0
CCDC12-209ENST00000604164 BCS1LQ9Y276 419 aa15.02■□□□□ -0
CCDC12-209ENST00000604164 MYL6BP14649 208 aa15.01□□□□□ -0.01
CCDC12-209ENST00000604164 EIF2S2P20042 333 aaKnown RBP15.01□□□□□ -0.01
CCDC12-209ENST00000604164 CCDC27Q2M243 656 aa15.01□□□□□ -0.01
CCDC12-209ENST00000604164 DALRD3Q5D0E6 543 aaKnown RBP15.01□□□□□ -0.01
CCDC12-209ENST00000604164 BRIP1Q9BX63 1249 aa15.01□□□□□ -0.01
CCDC12-209ENST00000604164 NRXN2Q9P2S2 1712 aa15□□□□□ -0.01
CCDC12-209ENST00000604164 MAP3K15Q6ZN16 1313 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms