RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 ANP32CO43423 234 aa31.91■■■□□ 2.7
UBE2E3-213ENST00000602959 PNISRQ8TF01 805 aaKnown RBP31.91■■■□□ 2.7
UBE2E3-213ENST00000602959 THUMPD2Q9BTF0 503 aaKnown RBP31.91■■■□□ 2.7
UBE2E3-213ENST00000602959 GYS1P13807 737 aa31.9■■■□□ 2.7
UBE2E3-213ENST00000602959 LMOD3Q0VAK6 560 aa31.9■■■□□ 2.7
UBE2E3-213ENST00000602959 USP42Q9H9J4 1324 aaKnown RBP31.9■■■□□ 2.7
UBE2E3-213ENST00000602959 COL15A1P39059 1388 aa31.9■■■□□ 2.7
UBE2E3-213ENST00000602959 NLGN1Q8N2Q7 840 aa31.89■■■□□ 2.7
UBE2E3-213ENST00000602959 LAMB4A4D0S4 1761 aa31.88■■■□□ 2.69
UBE2E3-213ENST00000602959 CCDC184Q52MB2 194 aa31.87■■■□□ 2.69
UBE2E3-213ENST00000602959 KLHL34Q8N239 644 aa31.86■■■□□ 2.69
UBE2E3-213ENST00000602959 MIS18AQ9NYP9 233 aa31.86■■■□□ 2.69
UBE2E3-213ENST00000602959 RRP7AQ9Y3A4 280 aaKnown RBP31.86■■■□□ 2.69
UBE2E3-213ENST00000602959 SNRPA1P09661 255 aaKnown RBP31.85■■■□□ 2.69
UBE2E3-213ENST00000602959 SRP68Q9UHB9 627 aaKnown RBP31.85■■■□□ 2.69
UBE2E3-213ENST00000602959 MMP10P09238 476 aa31.84■■■□□ 2.69
UBE2E3-213ENST00000602959 CANXP27824 592 aaKnown RBP31.84■■■□□ 2.69
UBE2E3-213ENST00000602959 EIF5P55010 431 aaKnown RBP31.83■■■□□ 2.69
UBE2E3-213ENST00000602959 CD2APQ9Y5K6 639 aa31.83■■■□□ 2.69
UBE2E3-213ENST00000602959 USP16Q9Y5T5 823 aa31.82■■■□□ 2.68
UBE2E3-213ENST00000602959 KIF13BQ9NQT8 1826 aa31.82■■■□□ 2.68
UBE2E3-213ENST00000602959 SCN7AQ01118 1682 aa31.81■■■□□ 2.68
UBE2E3-213ENST00000602959 PRAMEF22A3QJZ6 481 aa31.81■■■□□ 2.68
UBE2E3-213ENST00000602959 NEUROD2Q15784 382 aa31.81■■■□□ 2.68
UBE2E3-213ENST00000602959 NARFQ9UHQ1 456 aa31.81■■■□□ 2.68
UBE2E3-213ENST00000602959 ZPR1O75312 459 aa31.8■■■□□ 2.68
UBE2E3-213ENST00000602959 IL6STP40189 918 aaPredicted RBP31.8■■■□□ 2.68
UBE2E3-213ENST00000602959 NLGN2Q8NFZ4 835 aa31.8■■■□□ 2.68
UBE2E3-213ENST00000602959 BABAM1Q9NWV8 329 aa31.8■■■□□ 2.68
UBE2E3-213ENST00000602959 TRIM35Q9UPQ4 493 aa31.8■■■□□ 2.68
UBE2E3-213ENST00000602959 A0A087WZG4 1122 aa31.79■■■□□ 2.68
UBE2E3-213ENST00000602959 DCAF8L1A6NGE4 600 aa31.79■■■□□ 2.68
UBE2E3-213ENST00000602959 A1BGP04217 495 aa31.79■■■□□ 2.68
UBE2E3-213ENST00000602959 FKBP8Q14318 412 aa31.79■■■□□ 2.68
UBE2E3-213ENST00000602959 EIF4A1P60842 406 aaKnown RBP31.78■■■□□ 2.68
UBE2E3-213ENST00000602959 USPL1Q5W0Q7 1092 aa31.78■■■□□ 2.68
UBE2E3-213ENST00000602959 MRS2Q9HD23 443 aa31.76■■■□□ 2.67
UBE2E3-213ENST00000602959 TSPYL4Q9UJ04 414 aa31.76■■■□□ 2.67
UBE2E3-213ENST00000602959 GIGYF1O75420 1035 aaPredicted RBP31.75■■■□□ 2.67
UBE2E3-213ENST00000602959 BCORQ6W2J9 1755 aa31.75■■■□□ 2.67
UBE2E3-213ENST00000602959 C10orf71Q711Q0 1435 aa31.75■■■□□ 2.67
UBE2E3-213ENST00000602959 APAF1O14727 1248 aa31.74■■■□□ 2.67
UBE2E3-213ENST00000602959 PARP3Q9Y6F1 533 aa31.74■■■□□ 2.67
UBE2E3-213ENST00000602959 UTRNP46939 3433 aa31.73■■■□□ 2.67
UBE2E3-213ENST00000602959 BCL2L12Q9HB09 334 aa31.73■■■□□ 2.67
UBE2E3-213ENST00000602959 KIAA1551Q9HCM1 1747 aa31.72■■■□□ 2.67
UBE2E3-213ENST00000602959 DDR1Q08345 913 aa31.72■■■□□ 2.67
UBE2E3-213ENST00000602959 GOLGB1Q14789 3259 aaKnown RBP31.72■■■□□ 2.67
UBE2E3-213ENST00000602959 TM4SF1P30408 202 aa31.71■■■□□ 2.67
UBE2E3-213ENST00000602959 ZNF330Q9Y3S2 320 aaPredicted RBP31.71■■■□□ 2.67
UBE2E3-213ENST00000602959 NRXN2Q9P2S2 1712 aa31.7■■■□□ 2.67
UBE2E3-213ENST00000602959 NBPF26B4DH59 902 aa31.69■■■□□ 2.66
UBE2E3-213ENST00000602959 CHL1O00533 1208 aa31.69■■■□□ 2.66
UBE2E3-213ENST00000602959 PIP4K2AP48426 406 aaPredicted RBP31.69■■■□□ 2.66
UBE2E3-213ENST00000602959 NBPF10Q6P3W6 841 aaKnown RBP31.69■■■□□ 2.66
UBE2E3-213ENST00000602959 NPM2Q86SE8 214 aaKnown RBP31.69■■■□□ 2.66
UBE2E3-213ENST00000602959 NBPF15Q8N660 670 aa31.69■■■□□ 2.66
UBE2E3-213ENST00000602959 AFDNP55196 1824 aaKnown RBP31.69■■■□□ 2.66
UBE2E3-213ENST00000602959 POLRMTO00411 1230 aaKnown RBP31.68■■■□□ 2.66
UBE2E3-213ENST00000602959 TBC1D2BQ9UPU7 963 aa31.68■■■□□ 2.66
UBE2E3-213ENST00000602959 NFIXQ14938 502 aa31.67■■■□□ 2.66
UBE2E3-213ENST00000602959 PXDNLA1KZ92 1463 aa31.65■■■□□ 2.66
UBE2E3-213ENST00000602959 CAMTA2O94983 1202 aa31.65■■■□□ 2.66
UBE2E3-213ENST00000602959 N4BP2Q86UW6 1770 aaPredicted RBP31.64■■■□□ 2.66
UBE2E3-213ENST00000602959 GPR162Q16538 588 aa31.64■■■□□ 2.66
UBE2E3-213ENST00000602959 DZIP3Q86Y13 1208 aaKnown RBP31.64■■■□□ 2.66
UBE2E3-213ENST00000602959 CFAP44Q96MT7 982 aa31.63■■■□□ 2.65
UBE2E3-213ENST00000602959 TGFB2P61812 414 aa31.62■■■□□ 2.65
UBE2E3-213ENST00000602959 CHD4Q14839 1912 aa31.62■■■□□ 2.65
UBE2E3-213ENST00000602959 ERBB4Q15303 1308 aa31.62■■■□□ 2.65
UBE2E3-213ENST00000602959 CALD1Q05682 793 aaKnown RBP31.61■■■□□ 2.65
UBE2E3-213ENST00000602959 LAS1LQ9Y4W2 734 aaKnown RBP31.61■■■□□ 2.65
UBE2E3-213ENST00000602959 BRCA1P38398 1863 aaKnown RBP31.61■■■□□ 2.65
UBE2E3-213ENST00000602959 RGL2O15211 777 aa31.59■■■□□ 2.65
UBE2E3-213ENST00000602959 ZNF853P0CG23 659 aa31.59■■■□□ 2.65
UBE2E3-213ENST00000602959 YBX3P16989 372 aaKnown RBP eCLIP31.59■■■□□ 2.656e-8■□□□□ 9.7
UBE2E3-213ENST00000602959 TBC1D9BQ66K14 1250 aa31.59■■■□□ 2.65
UBE2E3-213ENST00000602959 PELP1Q8IZL8 1130 aaKnown RBP31.59■■■□□ 2.65
UBE2E3-213ENST00000602959 IFT57Q9NWB7 429 aa31.58■■■□□ 2.65
UBE2E3-213ENST00000602959 SERPINB2P05120 415 aa31.57■■■□□ 2.64
UBE2E3-213ENST00000602959 CCDC27Q2M243 656 aa31.57■■■□□ 2.64
UBE2E3-213ENST00000602959 NCBP3Q53F19 620 aaKnown RBP31.57■■■□□ 2.64
UBE2E3-213ENST00000602959 CLEC4GQ6UXB4 293 aa31.57■■■□□ 2.64
UBE2E3-213ENST00000602959 CARMIL3Q8ND23 1372 aa31.56■■■□□ 2.64
UBE2E3-213ENST00000602959 BICDL1Q6ZP65 573 aa31.56■■■□□ 2.64
UBE2E3-213ENST00000602959 MBIPQ9NS73 344 aa31.55■■■□□ 2.64
UBE2E3-213ENST00000602959 GNAI1P63096 354 aa31.54■■■□□ 2.64
UBE2E3-213ENST00000602959 KRT24Q2M2I5 525 aa31.54■■■□□ 2.64
UBE2E3-213ENST00000602959 ZNF652Q9Y2D9 606 aa31.54■■■□□ 2.64
UBE2E3-213ENST00000602959 GRIN3BO60391 1043 aa31.53■■■□□ 2.64
UBE2E3-213ENST00000602959 NUP98P52948 1817 aa31.52■■■□□ 2.64
UBE2E3-213ENST00000602959 A0A0G2JLW4 131 aa31.52■■■□□ 2.64
UBE2E3-213ENST00000602959 HOXB7P09629 217 aa31.52■■■□□ 2.64
UBE2E3-213ENST00000602959 MYL6BP14649 208 aa31.52■■■□□ 2.64
UBE2E3-213ENST00000602959 DPEP1P16444 411 aa31.52■■■□□ 2.64
UBE2E3-213ENST00000602959 EIF2S2P20042 333 aaKnown RBP31.52■■■□□ 2.64
UBE2E3-213ENST00000602959 PDIA6Q15084 440 aa31.52■■■□□ 2.64
UBE2E3-213ENST00000602959 DLEC1Q9Y238 1755 aa31.51■■■□□ 2.64
UBE2E3-213ENST00000602959 ANKRD31Q8N7Z5 1873 aa31.51■■■□□ 2.63
UBE2E3-213ENST00000602959 LRP10Q7Z4F1 713 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms