RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 NUTM2DQ5VT03 806 aaPredicted RBP10.58□□□□□ -0.72
FARP1-239ENST00000602171 NUTM2AQ8IVF1 878 aaPredicted RBP10.58□□□□□ -0.72
FARP1-239ENST00000602171 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
FARP1-239ENST00000602171 NPHP4O75161 1426 aaPredicted RBP10.58□□□□□ -0.72
FARP1-239ENST00000602171 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
FARP1-239ENST00000602171 TRIM46Q7Z4K8 759 aa10.57□□□□□ -0.72
FARP1-239ENST00000602171 NEXMIFQ5QGS0 1516 aa10.57□□□□□ -0.72
FARP1-239ENST00000602171 MYOM2P54296 1465 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 ADH1CP00326 375 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 BMP1P13497 986 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 BPHLQ86WA6 291 aaPredicted RBP10.56□□□□□ -0.72
FARP1-239ENST00000602171 CABLES1Q8TDN4 633 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 L3MBTL2Q969R5 705 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 CDK15Q96Q40 435 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 RSPH6AQ9H0K4 717 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
FARP1-239ENST00000602171 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
FARP1-239ENST00000602171 SCARF1Q14162 830 aa10.55□□□□□ -0.72
FARP1-239ENST00000602171 AGERQ15109 404 aa10.55□□□□□ -0.72
FARP1-239ENST00000602171 HELBQ8NG08 1087 aaPredicted RBP10.55□□□□□ -0.72
FARP1-239ENST00000602171 MAP10Q9P2G4 905 aa10.55□□□□□ -0.72
FARP1-239ENST00000602171 TBX22Q9Y458 520 aa10.55□□□□□ -0.72
FARP1-239ENST00000602171 LILRB3O75022 631 aa10.54□□□□□ -0.72
FARP1-239ENST00000602171 POLR1AO95602 1720 aaPredicted RBP10.54□□□□□ -0.72
FARP1-239ENST00000602171 TSC1Q92574 1164 aa10.54□□□□□ -0.72
FARP1-239ENST00000602171 ADGRF5Q8IZF2 1346 aa10.54□□□□□ -0.72
FARP1-239ENST00000602171 MYO5BQ9ULV0 1848 aa10.54□□□□□ -0.72
FARP1-239ENST00000602171 WDR4P57081 412 aaKnown RBP10.53□□□□□ -0.72
FARP1-239ENST00000602171 NR5A1Q13285 461 aa10.53□□□□□ -0.72
FARP1-239ENST00000602171 SLC26A8Q96RN1 970 aa10.53□□□□□ -0.72
FARP1-239ENST00000602171 LIMD1Q9UGP4 676 aa10.53□□□□□ -0.72
FARP1-239ENST00000602171 IQGAP1P46940 1657 aa10.53□□□□□ -0.72
FARP1-239ENST00000602171 PIK3R4Q99570 1358 aa10.52□□□□□ -0.72
FARP1-239ENST00000602171 DIP2AQ14689 1571 aa10.52□□□□□ -0.72
FARP1-239ENST00000602171 PPLO60437 1756 aa10.52□□□□□ -0.72
FARP1-239ENST00000602171 PIK3C2GO75747 1445 aa10.52□□□□□ -0.73
FARP1-239ENST00000602171 NBPF14Q5TI25 921 aa10.52□□□□□ -0.73
FARP1-239ENST00000602171 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
FARP1-239ENST00000602171 FOXJ1Q92949 421 aa10.52□□□□□ -0.73
FARP1-239ENST00000602171 ZFP42Q96MM3 310 aa10.52□□□□□ -0.73
FARP1-239ENST00000602171 SLC24A3Q9HC58 644 aa10.52□□□□□ -0.73
FARP1-239ENST00000602171 NRXN1Q9ULB1 1477 aa10.52□□□□□ -0.73
FARP1-239ENST00000602171 STRCQ7RTU9 1775 aa10.52□□□□□ -0.73
FARP1-239ENST00000602171 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
FARP1-239ENST00000602171 TIMP2P16035 220 aa10.51□□□□□ -0.73
FARP1-239ENST00000602171 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
FARP1-239ENST00000602171 C14orf93Q9H972 538 aaKnown RBP10.51□□□□□ -0.73
FARP1-239ENST00000602171 PER1O15534 1290 aaPredicted RBP10.5□□□□□ -0.73
FARP1-239ENST00000602171 CLK2P49760 499 aaKnown RBP10.5□□□□□ -0.73
FARP1-239ENST00000602171 QPCTQ16769 361 aa10.5□□□□□ -0.73
FARP1-239ENST00000602171 IRF7Q92985 503 aa10.5□□□□□ -0.73
FARP1-239ENST00000602171 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
FARP1-239ENST00000602171 ADAMTS13Q76LX8 1427 aa10.5□□□□□ -0.73
FARP1-239ENST00000602171 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
FARP1-239ENST00000602171 KCNA6P17658 529 aa10.49□□□□□ -0.73
FARP1-239ENST00000602171 KLF16Q9BXK1 252 aaPredicted RBP10.49□□□□□ -0.73
FARP1-239ENST00000602171 ZEB1P37275 1124 aaPredicted RBP10.48□□□□□ -0.73
FARP1-239ENST00000602171 CFAP70Q5T0N1 1121 aa10.48□□□□□ -0.73
FARP1-239ENST00000602171 GPKOWQ92917 476 aaPredicted RBP eCLIP10.48□□□□□ -0.73
FARP1-239ENST00000602171 LAMC1P11047 1609 aa10.47□□□□□ -0.73
FARP1-239ENST00000602171 ALKQ9UM73 1620 aa10.47□□□□□ -0.73
FARP1-239ENST00000602171 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
FARP1-239ENST00000602171 AMOTL2Q9Y2J4 779 aa10.46□□□□□ -0.73
FARP1-239ENST00000602171 ROCK2O75116 1388 aaKnown RBP10.46□□□□□ -0.74
FARP1-239ENST00000602171 METP08581 1390 aa10.46□□□□□ -0.74
FARP1-239ENST00000602171 NRXN3Q9Y4C0 1643 aa10.45□□□□□ -0.74
FARP1-239ENST00000602171 ZNF335Q9H4Z2 1342 aaPredicted RBP10.45□□□□□ -0.74
FARP1-239ENST00000602171 H3BM21 787 aa10.45□□□□□ -0.74
FARP1-239ENST00000602171 UPP2O95045 317 aa10.45□□□□□ -0.74
FARP1-239ENST00000602171 ZIC2O95409 532 aaPredicted RBP10.45□□□□□ -0.74
FARP1-239ENST00000602171 GRM5P41594 1212 aa10.45□□□□□ -0.74
FARP1-239ENST00000602171 C4orf48Q5BLP8 95 aa10.45□□□□□ -0.74
FARP1-239ENST00000602171 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
FARP1-239ENST00000602171 C1QTNF2Q9BXJ5 285 aa10.45□□□□□ -0.74
FARP1-239ENST00000602171 MAP4K5Q9Y4K4 846 aa10.45□□□□□ -0.74
FARP1-239ENST00000602171 CPS1P31327 1500 aa10.44□□□□□ -0.74
FARP1-239ENST00000602171 LRPPRCP42704 1394 aaKnown RBP10.44□□□□□ -0.74
FARP1-239ENST00000602171 ABCC11Q96J66 1382 aa10.44□□□□□ -0.74
FARP1-239ENST00000602171 NBPF8Q3BBV2 869 aa10.44□□□□□ -0.74
FARP1-239ENST00000602171 RTL5Q5HYW3 569 aaPredicted RBP10.44□□□□□ -0.74
FARP1-239ENST00000602171 LCE2CQ5TA81 110 aa10.44□□□□□ -0.74
FARP1-239ENST00000602171 TMEM132EQ6IEE7 984 aa10.44□□□□□ -0.74
FARP1-239ENST00000602171 SH3RF1Q7Z6J0 888 aa10.44□□□□□ -0.74
FARP1-239ENST00000602171 TRMT44Q8IYL2 757 aaKnown RBP10.44□□□□□ -0.74
FARP1-239ENST00000602171 SIRT1Q96EB6 747 aa10.44□□□□□ -0.74
FARP1-239ENST00000602171 NKTRP30414 1462 aaKnown RBP10.43□□□□□ -0.74
FARP1-239ENST00000602171 YTHDC2Q9H6S0 1430 aaKnown RBP10.43□□□□□ -0.74
FARP1-239ENST00000602171 PROSER2Q86WR7 435 aaPredicted RBP10.43□□□□□ -0.74
FARP1-239ENST00000602171 CARD11Q9BXL7 1154 aa10.43□□□□□ -0.74
FARP1-239ENST00000602171 POLR3EQ9NVU0 708 aa10.43□□□□□ -0.74
FARP1-239ENST00000602171 STK26Q9P289 416 aa10.43□□□□□ -0.74
FARP1-239ENST00000602171 KIAA1210Q9ULL0 1709 aa10.43□□□□□ -0.74
FARP1-239ENST00000602171 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
FARP1-239ENST00000602171 EIF3AQ14152 1382 aaKnown RBP10.42□□□□□ -0.74
FARP1-239ENST00000602171 NBPF1Q3BBV0 1214 aa10.42□□□□□ -0.74
FARP1-239ENST00000602171 VASH1Q7L8A9 365 aaPredicted RBP10.42□□□□□ -0.74
FARP1-239ENST00000602171 SH3BP5LQ7L8J4 393 aa10.42□□□□□ -0.74
FARP1-239ENST00000602171 ITPKCQ96DU7 683 aa10.42□□□□□ -0.74
FARP1-239ENST00000602171 TRAK1Q9UPV9 953 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms