RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 KLRG1Q96E93 195 aa19.18■□□□□ 0.66
NEAT1-203ENST00000601801 TNRC6CQ9HCJ0 1690 aaKnown RBP19.17■□□□□ 0.66
NEAT1-203ENST00000601801 FSTL1Q12841 308 aa19.17■□□□□ 0.66
NEAT1-203ENST00000601801 INTS5Q6P9B9 1019 aaKnown RBP19.17■□□□□ 0.66
NEAT1-203ENST00000601801 C16orf71Q8IYS4 520 aaPredicted RBP19.17■□□□□ 0.66
NEAT1-203ENST00000601801 CFAP53Q96M91 514 aa19.17■□□□□ 0.66
NEAT1-203ENST00000601801 HTRA3P83110 453 aa19.16■□□□□ 0.66
NEAT1-203ENST00000601801 GAS2L2Q8NHY3 880 aa19.16■□□□□ 0.66
NEAT1-203ENST00000601801 SRP68Q9UHB9 627 aaKnown RBP19.16■□□□□ 0.66
NEAT1-203ENST00000601801 USP42Q9H9J4 1324 aaKnown RBP19.16■□□□□ 0.66
NEAT1-203ENST00000601801 KCPQ6ZWJ8 1503 aa19.15■□□□□ 0.66
NEAT1-203ENST00000601801 COL13A1Q5TAT6 717 aaPredicted RBP19.15■□□□□ 0.66
NEAT1-203ENST00000601801 GNAT3A8MTJ3 354 aa19.14■□□□□ 0.65
NEAT1-203ENST00000601801 ZPR1O75312 459 aa19.14■□□□□ 0.65
NEAT1-203ENST00000601801 CYP19A1P11511 503 aaPredicted RBP19.14■□□□□ 0.65
NEAT1-203ENST00000601801 TTC5Q8N0Z6 440 aa19.14■□□□□ 0.65
NEAT1-203ENST00000601801 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
NEAT1-203ENST00000601801 PIM2Q9P1W9 311 aa19.14■□□□□ 0.65
NEAT1-203ENST00000601801 TEFQ10587 303 aa19.13■□□□□ 0.65
NEAT1-203ENST00000601801 FKBP8Q14318 412 aa19.13■□□□□ 0.65
NEAT1-203ENST00000601801 KDM2BQ8NHM5 1336 aa19.13■□□□□ 0.65
NEAT1-203ENST00000601801 SOS1Q07889 1333 aaPredicted RBP19.12■□□□□ 0.65
NEAT1-203ENST00000601801 NUDCQ9Y266 331 aa19.12■□□□□ 0.65
NEAT1-203ENST00000601801 UBR2Q8IWV8 1755 aa19.11■□□□□ 0.65
NEAT1-203ENST00000601801 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
NEAT1-203ENST00000601801 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
NEAT1-203ENST00000601801 DALRD3Q5D0E6 543 aaKnown RBP19.1■□□□□ 0.65
NEAT1-203ENST00000601801 USPL1Q5W0Q7 1092 aa19.1■□□□□ 0.65
NEAT1-203ENST00000601801 IL17REQ8NFR9 667 aa19.1■□□□□ 0.65
NEAT1-203ENST00000601801 RRAGCQ9HB90 399 aa19.1■□□□□ 0.65
NEAT1-203ENST00000601801 RNF181Q9P0P0 153 aa19.1■□□□□ 0.65
NEAT1-203ENST00000601801 COL15A1P39059 1388 aa19.09■□□□□ 0.65
NEAT1-203ENST00000601801 STARD3NLO95772 234 aa19.09■□□□□ 0.65
NEAT1-203ENST00000601801 PPP2R1AP30153 589 aa19.09■□□□□ 0.65
NEAT1-203ENST00000601801 DDR1Q08345 913 aa19.09■□□□□ 0.65
NEAT1-203ENST00000601801 RSPH6AQ9H0K4 717 aa19.09■□□□□ 0.65
NEAT1-203ENST00000601801 ZBTB1Q9Y2K1 713 aa19.09■□□□□ 0.65
NEAT1-203ENST00000601801 TM4SF1P30408 202 aa19.08■□□□□ 0.64
NEAT1-203ENST00000601801 ZNF790Q6PG37 636 aa19.08■□□□□ 0.64
NEAT1-203ENST00000601801 PHACTR3Q96KR7 559 aa19.08■□□□□ 0.64
NEAT1-203ENST00000601801 NARFQ9UHQ1 456 aa19.08■□□□□ 0.64
NEAT1-203ENST00000601801 SIPA1L3O60292 1781 aaPredicted RBP19.07■□□□□ 0.64
NEAT1-203ENST00000601801 POLRMTO00411 1230 aaKnown RBP19.07■□□□□ 0.64
NEAT1-203ENST00000601801 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
NEAT1-203ENST00000601801 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.641e-42■■■□□ 14.7
NEAT1-203ENST00000601801 ZNF496Q96IT1 587 aaPredicted RBP19.07■□□□□ 0.64
NEAT1-203ENST00000601801 TEX13AQ9BXU3 409 aaPredicted RBP19.07■□□□□ 0.64
NEAT1-203ENST00000601801 PCNTO95613 3336 aa19.07■□□□□ 0.64
NEAT1-203ENST00000601801 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
NEAT1-203ENST00000601801 SMC1BQ8NDV3 1235 aa19.06■□□□□ 0.64
NEAT1-203ENST00000601801 AFDNP55196 1824 aaKnown RBP19.06■□□□□ 0.64
NEAT1-203ENST00000601801 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
NEAT1-203ENST00000601801 CCDC88AQ3V6T2 1871 aa19.05■□□□□ 0.64
NEAT1-203ENST00000601801 CHRNA5P30532 468 aa19.05■□□□□ 0.64
NEAT1-203ENST00000601801 TNS4Q8IZW8 715 aa19.05■□□□□ 0.64
NEAT1-203ENST00000601801 DLEC1Q9Y238 1755 aa19.05■□□□□ 0.64
NEAT1-203ENST00000601801 CEMIPQ8WUJ3 1361 aa19.05■□□□□ 0.64
NEAT1-203ENST00000601801 CAPN15O75808 1086 aa19.04■□□□□ 0.64
NEAT1-203ENST00000601801 FMNL2Q96PY5 1086 aa19.04■□□□□ 0.64
NEAT1-203ENST00000601801 ZC3H4Q9UPT8 1303 aaKnown RBP19.03■□□□□ 0.64
NEAT1-203ENST00000601801 A0A087WZG4 1122 aa19.03■□□□□ 0.64
NEAT1-203ENST00000601801 BTBD11A6QL63 1104 aa19.03■□□□□ 0.64
NEAT1-203ENST00000601801 PRELPP51888 382 aa19.03■□□□□ 0.64
NEAT1-203ENST00000601801 NFIXQ14938 502 aa19.03■□□□□ 0.64
NEAT1-203ENST00000601801 NRXN2Q9P2S2 1712 aa19.03■□□□□ 0.64
NEAT1-203ENST00000601801 EIF5P55010 431 aaKnown RBP19.02■□□□□ 0.64
NEAT1-203ENST00000601801 RTF1Q92541 710 aaKnown RBP19.02■□□□□ 0.64
NEAT1-203ENST00000601801 TIAM2Q8IVF5 1701 aa19.02■□□□□ 0.63
NEAT1-203ENST00000601801 BCL2L12Q9HB09 334 aa19.01■□□□□ 0.63
NEAT1-203ENST00000601801 SERPINB2P05120 415 aa19■□□□□ 0.63
NEAT1-203ENST00000601801 RASSF7Q02833 373 aa19■□□□□ 0.63
NEAT1-203ENST00000601801 NPM2Q86SE8 214 aaKnown RBP19■□□□□ 0.63
NEAT1-203ENST00000601801 ZNF330Q9Y3S2 320 aaPredicted RBP19■□□□□ 0.63
NEAT1-203ENST00000601801 IL6STP40189 918 aaPredicted RBP18.99■□□□□ 0.63
NEAT1-203ENST00000601801 GLTPD2A6NH11 291 aa18.98■□□□□ 0.63
NEAT1-203ENST00000601801 KCNQ3O43525 872 aa18.98■□□□□ 0.63
NEAT1-203ENST00000601801 BICDL1Q6ZP65 573 aa18.98■□□□□ 0.63
NEAT1-203ENST00000601801 MCM10Q7L590 875 aa18.98■□□□□ 0.63
NEAT1-203ENST00000601801 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
NEAT1-203ENST00000601801 NEFMP07197 916 aa18.97■□□□□ 0.63
NEAT1-203ENST00000601801 HSPA1AP0DMV8 641 aaKnown RBP18.97■□□□□ 0.63
NEAT1-203ENST00000601801 HSPA1BP0DMV9 641 aaKnown RBP18.97■□□□□ 0.63
NEAT1-203ENST00000601801 VEGFAP15692 232 aaPredicted RBP18.97■□□□□ 0.63
NEAT1-203ENST00000601801 LMNB1P20700 586 aa18.97■□□□□ 0.63
NEAT1-203ENST00000601801 TBC1D2BQ9UPU7 963 aa18.97■□□□□ 0.63
NEAT1-203ENST00000601801 SCN7AQ01118 1682 aa18.96■□□□□ 0.63
NEAT1-203ENST00000601801 A1BGP04217 495 aa18.96■□□□□ 0.63
NEAT1-203ENST00000601801 DICER1Q9UPY3 1922 aaKnown RBP18.96■□□□□ 0.63
NEAT1-203ENST00000601801 TBC1D9BQ66K14 1250 aa18.95■□□□□ 0.62
NEAT1-203ENST00000601801 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
NEAT1-203ENST00000601801 DCTN1Q14203 1278 aa18.94■□□□□ 0.62
NEAT1-203ENST00000601801 H0YIN7 160 aa18.93■□□□□ 0.62
NEAT1-203ENST00000601801 C2CD5Q86YS7 1000 aa18.93■□□□□ 0.62
NEAT1-203ENST00000601801 MIER1Q8N108 512 aa18.93■□□□□ 0.62
NEAT1-203ENST00000601801 USP16Q9Y5T5 823 aa18.93■□□□□ 0.62
NEAT1-203ENST00000601801 CARMIL3Q8ND23 1372 aa18.93■□□□□ 0.62
NEAT1-203ENST00000601801 TAF7Q15545 349 aaPredicted RBP18.92■□□□□ 0.62
NEAT1-203ENST00000601801 DZIP3Q86Y13 1208 aaKnown RBP18.92■□□□□ 0.62
NEAT1-203ENST00000601801 TTLL6Q8N841 843 aa18.92■□□□□ 0.62
NEAT1-203ENST00000601801 FER1L6Q2WGJ9 1857 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms