RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
SNRPA-208ENST00000600456 IFT57Q9NWB7 429 aa18.03■□□□□ 0.48
SNRPA-208ENST00000600456 LRP5O75197 1615 aa18.02■□□□□ 0.48
SNRPA-208ENST00000600456 MSH5O43196 834 aa18.02■□□□□ 0.48
SNRPA-208ENST00000600456 PHF14O94880 888 aa18.02■□□□□ 0.48
SNRPA-208ENST00000600456 TRAPPC3LQ5T215 181 aa18.02■□□□□ 0.48
SNRPA-208ENST00000600456 AMIGO3Q86WK7 504 aa18.02■□□□□ 0.48
SNRPA-208ENST00000600456 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
SNRPA-208ENST00000600456 GIGYF1O75420 1035 aaPredicted RBP18.01■□□□□ 0.47
SNRPA-208ENST00000600456 ZBTB7AO95365 584 aa18.01■□□□□ 0.47
SNRPA-208ENST00000600456 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
SNRPA-208ENST00000600456 GNAI1P63096 354 aa18.01■□□□□ 0.47
SNRPA-208ENST00000600456 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
SNRPA-208ENST00000600456 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
SNRPA-208ENST00000600456 ZBTB1Q9Y2K1 713 aa18■□□□□ 0.47
SNRPA-208ENST00000600456 IL16Q14005 1332 aa17.99■□□□□ 0.47
SNRPA-208ENST00000600456 MYH14Q7Z406 1995 aaKnown RBP17.99■□□□□ 0.47
SNRPA-208ENST00000600456 ARHGEF1Q92888 912 aaKnown RBP17.99■□□□□ 0.47
SNRPA-208ENST00000600456 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
SNRPA-208ENST00000600456 RFC4P35249 363 aa17.98■□□□□ 0.47
SNRPA-208ENST00000600456 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
SNRPA-208ENST00000600456 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
SNRPA-208ENST00000600456 PRAMEF22A3QJZ6 481 aa17.97■□□□□ 0.47
SNRPA-208ENST00000600456 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
SNRPA-208ENST00000600456 IL6STP40189 918 aaPredicted RBP17.97■□□□□ 0.47
SNRPA-208ENST00000600456 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
SNRPA-208ENST00000600456 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
SNRPA-208ENST00000600456 COL15A1P39059 1388 aa17.96■□□□□ 0.47
SNRPA-208ENST00000600456 A0A087WZG4 1122 aa17.96■□□□□ 0.47
SNRPA-208ENST00000600456 A1BGP04217 495 aa17.96■□□□□ 0.47
SNRPA-208ENST00000600456 HOXB7P09629 217 aa17.96■□□□□ 0.47
SNRPA-208ENST00000600456 PTGER2P43116 358 aa17.96■□□□□ 0.47
SNRPA-208ENST00000600456 EIF5P55010 431 aaKnown RBP17.96■□□□□ 0.47
SNRPA-208ENST00000600456 SGIP1Q9BQI5 828 aa17.96■□□□□ 0.47
SNRPA-208ENST00000600456 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
SNRPA-208ENST00000600456 ERBB4Q15303 1308 aa17.96■□□□□ 0.46
SNRPA-208ENST00000600456 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
SNRPA-208ENST00000600456 POLD1P28340 1107 aa17.95■□□□□ 0.46
SNRPA-208ENST00000600456 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
SNRPA-208ENST00000600456 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
SNRPA-208ENST00000600456 COL24A1Q17RW2 1714 aa17.95■□□□□ 0.46
SNRPA-208ENST00000600456 NLGN1Q8N2Q7 840 aa17.94■□□□□ 0.46
SNRPA-208ENST00000600456 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
SNRPA-208ENST00000600456 ZPR1O75312 459 aa17.93■□□□□ 0.46
SNRPA-208ENST00000600456 NARFQ9UHQ1 456 aa17.93■□□□□ 0.46
SNRPA-208ENST00000600456 ZNF521Q96K83 1311 aa17.93■□□□□ 0.46
SNRPA-208ENST00000600456 C4AP0C0L4 1744 aa17.92■□□□□ 0.46
SNRPA-208ENST00000600456 GYS1P13807 737 aa17.92■□□□□ 0.46
SNRPA-208ENST00000600456 MSL1Q68DK7 614 aa17.92■□□□□ 0.46
SNRPA-208ENST00000600456 PPP1R1BQ9UD71 204 aaPredicted RBP17.92■□□□□ 0.46
SNRPA-208ENST00000600456 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
SNRPA-208ENST00000600456 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
SNRPA-208ENST00000600456 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
SNRPA-208ENST00000600456 ARXQ96QS3 562 aa17.91■□□□□ 0.46
SNRPA-208ENST00000600456 CHMP4AQ9BY43 222 aa17.91■□□□□ 0.46
SNRPA-208ENST00000600456 KRT24Q2M2I5 525 aa17.9■□□□□ 0.46
SNRPA-208ENST00000600456 DUSP27Q5VZP5 1158 aa17.9■□□□□ 0.46
SNRPA-208ENST00000600456 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
SNRPA-208ENST00000600456 SRP68Q9UHB9 627 aaKnown RBP17.9■□□□□ 0.46
SNRPA-208ENST00000600456 ZNF330Q9Y3S2 320 aaPredicted RBP17.9■□□□□ 0.46
SNRPA-208ENST00000600456 RGL2O15211 777 aa17.89■□□□□ 0.45
SNRPA-208ENST00000600456 EIF2S2P20042 333 aaKnown RBP17.89■□□□□ 0.45
SNRPA-208ENST00000600456 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
SNRPA-208ENST00000600456 TSR2Q969E8 191 aaKnown RBP17.89■□□□□ 0.45
SNRPA-208ENST00000600456 SRCAPQ6ZRS2 3230 aa17.88■□□□□ 0.45
SNRPA-208ENST00000600456 PIP4K2AP48426 406 aaPredicted RBP17.88■□□□□ 0.45
SNRPA-208ENST00000600456 HDGFL1Q5TGJ6 251 aa17.88■□□□□ 0.45
SNRPA-208ENST00000600456 DZIP3Q86Y13 1208 aaKnown RBP17.88■□□□□ 0.45
SNRPA-208ENST00000600456 FANCIQ9NVI1 1328 aa17.88■□□□□ 0.45
SNRPA-208ENST00000600456 MMP10P09238 476 aa17.87■□□□□ 0.45
SNRPA-208ENST00000600456 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
SNRPA-208ENST00000600456 TBC1D2BQ9UPU7 963 aa17.87■□□□□ 0.45
SNRPA-208ENST00000600456 CAMTA2O94983 1202 aa17.86■□□□□ 0.45
SNRPA-208ENST00000600456 FKBP8Q14318 412 aa17.86■□□□□ 0.45
SNRPA-208ENST00000600456 PDIA6Q15084 440 aa17.86■□□□□ 0.45
SNRPA-208ENST00000600456 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
SNRPA-208ENST00000600456 DDX21Q9NR30 783 aaKnown RBP eCLIP17.86■□□□□ 0.45
SNRPA-208ENST00000600456 DBF4Q9UBU7 674 aaPredicted RBP17.86■□□□□ 0.45
SNRPA-208ENST00000600456 MYL6BP14649 208 aa17.85■□□□□ 0.45
SNRPA-208ENST00000600456 SCN7AQ01118 1682 aa17.85■□□□□ 0.45
SNRPA-208ENST00000600456 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
SNRPA-208ENST00000600456 BCL2L12Q9HB09 334 aa17.85■□□□□ 0.45
SNRPA-208ENST00000600456 ZNF652Q9Y2D9 606 aa17.85■□□□□ 0.45
SNRPA-208ENST00000600456 E9PSI1 815 aa17.84■□□□□ 0.45
SNRPA-208ENST00000600456 LRP10Q7Z4F1 713 aa17.84■□□□□ 0.45
SNRPA-208ENST00000600456 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
SNRPA-208ENST00000600456 ERVV-1B6SEH8 477 aa17.83■□□□□ 0.44
SNRPA-208ENST00000600456 ELL2O00472 640 aaPredicted RBP17.83■□□□□ 0.44
SNRPA-208ENST00000600456 TM4SF1P30408 202 aa17.83■□□□□ 0.44
SNRPA-208ENST00000600456 TWISTNBQ3B726 338 aaPredicted RBP17.83■□□□□ 0.44
SNRPA-208ENST00000600456 KIF6Q6ZMV9 814 aa17.83■□□□□ 0.44
SNRPA-208ENST00000600456 NECTIN2Q92692 538 aa17.83■□□□□ 0.44
SNRPA-208ENST00000600456 CHPF2Q9P2E5 772 aa17.83■□□□□ 0.44
SNRPA-208ENST00000600456 PARP3Q9Y6F1 533 aa17.83■□□□□ 0.44
SNRPA-208ENST00000600456 NFIXQ14938 502 aa17.82■□□□□ 0.44
SNRPA-208ENST00000600456 PROSER3Q2NL68 480 aa17.82■□□□□ 0.44
SNRPA-208ENST00000600456 CCDC30Q5VVM6 783 aa17.82■□□□□ 0.44
SNRPA-208ENST00000600456 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
SNRPA-208ENST00000600456 FHDC1Q9C0D6 1143 aaPredicted RBP17.82■□□□□ 0.44
SNRPA-208ENST00000600456 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms