RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 SRP68Q9UHB9 627 aaKnown RBP20.73■□□□□ 0.91
IRF3-226ENST00000600453 ZBTB1Q9Y2K1 713 aa20.73■□□□□ 0.91
IRF3-226ENST00000600453 FKBP8Q14318 412 aa20.72■□□□□ 0.91
IRF3-226ENST00000600453 TAF7Q15545 349 aaPredicted RBP20.72■□□□□ 0.91
IRF3-226ENST00000600453 MAPK8IP3Q9UPT6 1336 aa20.72■□□□□ 0.91
IRF3-226ENST00000600453 UBR2Q8IWV8 1755 aa20.72■□□□□ 0.91
IRF3-226ENST00000600453 USPL1Q5W0Q7 1092 aa20.71■□□□□ 0.91
IRF3-226ENST00000600453 COL15A1P39059 1388 aa20.71■□□□□ 0.91
IRF3-226ENST00000600453 SIPA1L3O60292 1781 aaPredicted RBP20.7■□□□□ 0.9
IRF3-226ENST00000600453 TM4SF1P30408 202 aa20.7■□□□□ 0.9
IRF3-226ENST00000600453 EIF5P55010 431 aaKnown RBP20.7■□□□□ 0.9
IRF3-226ENST00000600453 PNISRQ8TF01 805 aaKnown RBP20.7■□□□□ 0.9
IRF3-226ENST00000600453 PLEKHF1Q96S99 279 aa20.7■□□□□ 0.9
IRF3-226ENST00000600453 MYBBP1AQ9BQG0 1328 aaKnown RBP20.7■□□□□ 0.9
IRF3-226ENST00000600453 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
IRF3-226ENST00000600453 IL6STP40189 918 aaPredicted RBP20.69■□□□□ 0.9
IRF3-226ENST00000600453 NFE2L2Q16236 605 aa20.69■□□□□ 0.9
IRF3-226ENST00000600453 ZNF784Q8NCA9 323 aaPredicted RBP20.69■□□□□ 0.9
IRF3-226ENST00000600453 C4AP0C0L4 1744 aa20.69■□□□□ 0.9
IRF3-226ENST00000600453 DCTN1Q14203 1278 aa20.68■□□□□ 0.9
IRF3-226ENST00000600453 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
IRF3-226ENST00000600453 KCNQ3O43525 872 aa20.66■□□□□ 0.9
IRF3-226ENST00000600453 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
IRF3-226ENST00000600453 KIF13BQ9NQT8 1826 aa20.66■□□□□ 0.9
IRF3-226ENST00000600453 UTRNP46939 3433 aa20.66■□□□□ 0.9
IRF3-226ENST00000600453 POLRMTO00411 1230 aaKnown RBP20.65■□□□□ 0.9
IRF3-226ENST00000600453 A1BGP04217 495 aa20.64■□□□□ 0.89
IRF3-226ENST00000600453 DPEP1P16444 411 aa20.64■□□□□ 0.89
IRF3-226ENST00000600453 DDR1Q08345 913 aa20.64■□□□□ 0.89
IRF3-226ENST00000600453 NFIXQ14938 502 aa20.64■□□□□ 0.89
IRF3-226ENST00000600453 PIM2Q9P1W9 311 aa20.64■□□□□ 0.89
IRF3-226ENST00000600453 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
IRF3-226ENST00000600453 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
IRF3-226ENST00000600453 BCS1LQ9Y276 419 aa20.63■□□□□ 0.89
IRF3-226ENST00000600453 SERPINB2P05120 415 aa20.62■□□□□ 0.89
IRF3-226ENST00000600453 LMOD3Q0VAK6 560 aa20.62■□□□□ 0.89
IRF3-226ENST00000600453 BCL2L12Q9HB09 334 aa20.62■□□□□ 0.89
IRF3-226ENST00000600453 PXDNLA1KZ92 1463 aa20.62■□□□□ 0.89
IRF3-226ENST00000600453 RIPK4P57078 832 aa20.61■□□□□ 0.89
IRF3-226ENST00000600453 WDR43Q15061 677 aaKnown RBP eCLIP20.61■□□□□ 0.89
IRF3-226ENST00000600453 WWC3Q9ULE0 1092 aa20.61■□□□□ 0.89
IRF3-226ENST00000600453 TBC1D2BQ9UPU7 963 aa20.61■□□□□ 0.89
IRF3-226ENST00000600453 PRKRIP1Q9H875 184 aaPredicted RBP20.6■□□□□ 0.89
IRF3-226ENST00000600453 MIS18AQ9NYP9 233 aa20.6■□□□□ 0.89
IRF3-226ENST00000600453 DLG5Q8TDM6 1919 aa20.59■□□□□ 0.89
IRF3-226ENST00000600453 DALRD3Q5D0E6 543 aaKnown RBP20.59■□□□□ 0.89
IRF3-226ENST00000600453 KCNA3P22001 575 aa20.58■□□□□ 0.89
IRF3-226ENST00000600453 CLEC4GQ6UXB4 293 aa20.58■□□□□ 0.89
IRF3-226ENST00000600453 BICDL1Q6ZP65 573 aa20.58■□□□□ 0.89
IRF3-226ENST00000600453 DZIP3Q86Y13 1208 aaKnown RBP20.58■□□□□ 0.89
IRF3-226ENST00000600453 SETDB2Q96T68 719 aa20.58■□□□□ 0.89
IRF3-226ENST00000600453 BABAM1Q9NWV8 329 aa20.58■□□□□ 0.89
IRF3-226ENST00000600453 PDZRN3Q9UPQ7 1066 aa20.58■□□□□ 0.89
IRF3-226ENST00000600453 N4BP2Q86UW6 1770 aaPredicted RBP20.58■□□□□ 0.89
IRF3-226ENST00000600453 GOLGB1Q14789 3259 aaKnown RBP20.58■□□□□ 0.88
IRF3-226ENST00000600453 RGL2O15211 777 aa20.57■□□□□ 0.88
IRF3-226ENST00000600453 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
IRF3-226ENST00000600453 ZNF652Q9Y2D9 606 aa20.57■□□□□ 0.88
IRF3-226ENST00000600453 TBC1D9BQ66K14 1250 aa20.56■□□□□ 0.88
IRF3-226ENST00000600453 ARHGAP27Q6ZUM4 889 aa20.56■□□□□ 0.88
IRF3-226ENST00000600453 RUNDC1Q96C34 613 aa20.56■□□□□ 0.88
IRF3-226ENST00000600453 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
IRF3-226ENST00000600453 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
IRF3-226ENST00000600453 CAMTA2O94983 1202 aa20.55■□□□□ 0.88
IRF3-226ENST00000600453 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
IRF3-226ENST00000600453 H0YIN7 160 aa20.54■□□□□ 0.88
IRF3-226ENST00000600453 THUMPD2Q9BTF0 503 aaKnown RBP20.54■□□□□ 0.88
IRF3-226ENST00000600453 KIAA1551Q9HCM1 1747 aa20.53■□□□□ 0.88
IRF3-226ENST00000600453 NPHP1O15259 732 aa20.53■□□□□ 0.88
IRF3-226ENST00000600453 CHRNA5P30532 468 aa20.53■□□□□ 0.88
IRF3-226ENST00000600453 PDE6BP35913 854 aa20.53■□□□□ 0.88
IRF3-226ENST00000600453 BRIP1Q9BX63 1249 aa20.53■□□□□ 0.88
IRF3-226ENST00000600453 TSPYL4Q9UJ04 414 aa20.53■□□□□ 0.88
IRF3-226ENST00000600453 CARMIL3Q8ND23 1372 aa20.53■□□□□ 0.88
IRF3-226ENST00000600453 ADAMTS8Q9UP79 889 aa20.52■□□□□ 0.88
IRF3-226ENST00000600453 AFDNP55196 1824 aaKnown RBP20.52■□□□□ 0.88
IRF3-226ENST00000600453 NRXN2Q9P2S2 1712 aa20.51■□□□□ 0.87
IRF3-226ENST00000600453 NBPF26B4DH59 902 aa20.51■□□□□ 0.87
IRF3-226ENST00000600453 PIP4K2AP48426 406 aaPredicted RBP20.51■□□□□ 0.87
IRF3-226ENST00000600453 NBPF10Q6P3W6 841 aaKnown RBP20.51■□□□□ 0.87
IRF3-226ENST00000600453 C2CD5Q86YS7 1000 aa20.51■□□□□ 0.87
IRF3-226ENST00000600453 NBPF15Q8N660 670 aa20.51■□□□□ 0.87
IRF3-226ENST00000600453 GPBP1L1Q9HC44 474 aaPredicted RBP20.51■□□□□ 0.87
IRF3-226ENST00000600453 ST5P78524 1137 aa20.5■□□□□ 0.87
IRF3-226ENST00000600453 NEUROD2Q15784 382 aa20.5■□□□□ 0.87
IRF3-226ENST00000600453 CCDC146Q8IYE0 955 aa20.5■□□□□ 0.87
IRF3-226ENST00000600453 TTLL6Q8N841 843 aa20.5■□□□□ 0.87
IRF3-226ENST00000600453 CNBD1Q8NA66 436 aa20.5■□□□□ 0.87
IRF3-226ENST00000600453 BRCA1P38398 1863 aaKnown RBP20.5■□□□□ 0.87
IRF3-226ENST00000600453 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
IRF3-226ENST00000600453 TPTE2Q6XPS3 522 aa20.49■□□□□ 0.87
IRF3-226ENST00000600453 ATP10DQ9P241 1426 aa20.49■□□□□ 0.87
IRF3-226ENST00000600453 ERBB4Q15303 1308 aa20.49■□□□□ 0.87
IRF3-226ENST00000600453 ARFGEF1Q9Y6D6 1849 aa20.48■□□□□ 0.87
IRF3-226ENST00000600453 ERVV-1B6SEH8 477 aa20.48■□□□□ 0.87
IRF3-226ENST00000600453 RRP7AQ9Y3A4 280 aaKnown RBP20.48■□□□□ 0.87
IRF3-226ENST00000600453 KDM3BQ7LBC6 1761 aa20.48■□□□□ 0.87
IRF3-226ENST00000600453 C1QTNF8P60827 252 aa20.47■□□□□ 0.87
IRF3-226ENST00000600453 NBPF5PQ86XG9 351 aaPredicted RBP20.47■□□□□ 0.87
IRF3-226ENST00000600453 SCN7AQ01118 1682 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms