RNA–Protein interactions for RNA: ENST00000600432.1

CHERP-207, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 3

Gene CHERP, Length 554 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-207ENST00000600432 YBX3P16989 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
CHERP-207ENST00000600432 COL15A1P39059 1388 aa16.61■□□□□ 0.25
CHERP-207ENST00000600432 STARD3NLO95772 234 aa16.6■□□□□ 0.25
CHERP-207ENST00000600432 NFE2L2Q16236 605 aa16.6■□□□□ 0.25
CHERP-207ENST00000600432 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
CHERP-207ENST00000600432 PRKRIP1Q9H875 184 aaPredicted RBP16.6■□□□□ 0.25
CHERP-207ENST00000600432 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
CHERP-207ENST00000600432 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
CHERP-207ENST00000600432 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
CHERP-207ENST00000600432 ZPR1O75312 459 aa16.59■□□□□ 0.25
CHERP-207ENST00000600432 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
CHERP-207ENST00000600432 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
CHERP-207ENST00000600432 MIS18AQ9NYP9 233 aa16.59■□□□□ 0.25
CHERP-207ENST00000600432 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
CHERP-207ENST00000600432 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
CHERP-207ENST00000600432 A1BGP04217 495 aa16.58■□□□□ 0.24
CHERP-207ENST00000600432 EIF5P55010 431 aaKnown RBP16.58■□□□□ 0.24
CHERP-207ENST00000600432 DDR1Q08345 913 aa16.58■□□□□ 0.24
CHERP-207ENST00000600432 TAF7Q15545 349 aaPredicted RBP16.58■□□□□ 0.24
CHERP-207ENST00000600432 THUMPD2Q9BTF0 503 aaKnown RBP16.58■□□□□ 0.24
CHERP-207ENST00000600432 NARFQ9UHQ1 456 aa16.58■□□□□ 0.24
CHERP-207ENST00000600432 USP16Q9Y5T5 823 aa16.58■□□□□ 0.24
CHERP-207ENST00000600432 C10orf71Q711Q0 1435 aa16.57■□□□□ 0.24
CHERP-207ENST00000600432 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
CHERP-207ENST00000600432 CHD4Q14839 1912 aa16.57■□□□□ 0.24
CHERP-207ENST00000600432 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
CHERP-207ENST00000600432 TM4SF1P30408 202 aa16.56■□□□□ 0.24
CHERP-207ENST00000600432 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
CHERP-207ENST00000600432 PIP4K2AP48426 406 aaPredicted RBP16.55■□□□□ 0.24
CHERP-207ENST00000600432 CCDC146Q8IYE0 955 aa16.55■□□□□ 0.24
CHERP-207ENST00000600432 KIAA1551Q9HCM1 1747 aa16.55■□□□□ 0.24
CHERP-207ENST00000600432 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
CHERP-207ENST00000600432 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
CHERP-207ENST00000600432 POLRMTO00411 1230 aaKnown RBP16.54■□□□□ 0.24
CHERP-207ENST00000600432 GRIN3BO60391 1043 aa16.54■□□□□ 0.24
CHERP-207ENST00000600432 SNRPA1P09661 255 aaKnown RBP16.54■□□□□ 0.24
CHERP-207ENST00000600432 IL6STP40189 918 aaPredicted RBP16.54■□□□□ 0.24
CHERP-207ENST00000600432 RIPK4P57078 832 aa16.54■□□□□ 0.24
CHERP-207ENST00000600432 NFIXQ14938 502 aa16.54■□□□□ 0.24
CHERP-207ENST00000600432 A0A087WZG4 1122 aa16.53■□□□□ 0.24
CHERP-207ENST00000600432 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
CHERP-207ENST00000600432 TGFB2P61812 414 aa16.53■□□□□ 0.24
CHERP-207ENST00000600432 TBC1D2BQ9UPU7 963 aa16.53■□□□□ 0.24
CHERP-207ENST00000600432 RRP7AQ9Y3A4 280 aaKnown RBP16.53■□□□□ 0.24
CHERP-207ENST00000600432 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
CHERP-207ENST00000600432 DPEP1P16444 411 aa16.52■□□□□ 0.24
CHERP-207ENST00000600432 TMPOP42166 694 aaKnown RBP16.52■□□□□ 0.24
CHERP-207ENST00000600432 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.24
CHERP-207ENST00000600432 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
CHERP-207ENST00000600432 ZNF316A6NFI3 1004 aaPredicted RBP16.51■□□□□ 0.23
CHERP-207ENST00000600432 NEUROD2Q15784 382 aa16.51■□□□□ 0.23
CHERP-207ENST00000600432 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
CHERP-207ENST00000600432 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
CHERP-207ENST00000600432 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
CHERP-207ENST00000600432 ZNF784Q8NCA9 323 aaPredicted RBP16.5■□□□□ 0.23
CHERP-207ENST00000600432 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
CHERP-207ENST00000600432 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
CHERP-207ENST00000600432 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
CHERP-207ENST00000600432 NBPF26B4DH59 902 aa16.49■□□□□ 0.23
CHERP-207ENST00000600432 CAMTA2O94983 1202 aa16.49■□□□□ 0.23
CHERP-207ENST00000600432 SERPINB2P05120 415 aa16.49■□□□□ 0.23
CHERP-207ENST00000600432 KCNA3P22001 575 aa16.49■□□□□ 0.23
CHERP-207ENST00000600432 TBC1D9BQ66K14 1250 aa16.49■□□□□ 0.23
CHERP-207ENST00000600432 NBPF10Q6P3W6 841 aaKnown RBP16.49■□□□□ 0.23
CHERP-207ENST00000600432 NPM2Q86SE8 214 aaKnown RBP16.49■□□□□ 0.23
CHERP-207ENST00000600432 NBPF15Q8N660 670 aa16.49■□□□□ 0.23
CHERP-207ENST00000600432 NRXN2Q9P2S2 1712 aa16.48■□□□□ 0.23
CHERP-207ENST00000600432 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
CHERP-207ENST00000600432 DZIP3Q86Y13 1208 aaKnown RBP16.48■□□□□ 0.23
CHERP-207ENST00000600432 BCS1LQ9Y276 419 aa16.48■□□□□ 0.23
CHERP-207ENST00000600432 CHRNA5P30532 468 aa16.47■□□□□ 0.23
CHERP-207ENST00000600432 CCDC184Q52MB2 194 aa16.47■□□□□ 0.23
CHERP-207ENST00000600432 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
CHERP-207ENST00000600432 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.23
CHERP-207ENST00000600432 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.23
CHERP-207ENST00000600432 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
CHERP-207ENST00000600432 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
CHERP-207ENST00000600432 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
CHERP-207ENST00000600432 CARMIL3Q8ND23 1372 aa16.45■□□□□ 0.22
CHERP-207ENST00000600432 CCDC24Q8N4L8 307 aa16.44■□□□□ 0.22
CHERP-207ENST00000600432 PIM2Q9P1W9 311 aa16.44■□□□□ 0.22
CHERP-207ENST00000600432 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
CHERP-207ENST00000600432 PRR5LQ6MZQ0 368 aa16.42■□□□□ 0.22
CHERP-207ENST00000600432 SETDB2Q96T68 719 aa16.42■□□□□ 0.22
CHERP-207ENST00000600432 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
CHERP-207ENST00000600432 APAF1O14727 1248 aa16.41■□□□□ 0.22
CHERP-207ENST00000600432 MYL6BP14649 208 aa16.41■□□□□ 0.22
CHERP-207ENST00000600432 HLFQ16534 295 aa16.41■□□□□ 0.22
CHERP-207ENST00000600432 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
CHERP-207ENST00000600432 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
CHERP-207ENST00000600432 ANKRD31Q8N7Z5 1873 aa16.4■□□□□ 0.22
CHERP-207ENST00000600432 CHL1O00533 1208 aa16.4■□□□□ 0.22
CHERP-207ENST00000600432 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
CHERP-207ENST00000600432 CLEC4GQ6UXB4 293 aa16.4■□□□□ 0.22
CHERP-207ENST00000600432 ARHGAP27Q6ZUM4 889 aa16.4■□□□□ 0.22
CHERP-207ENST00000600432 C2CD5Q86YS7 1000 aa16.4■□□□□ 0.22
CHERP-207ENST00000600432 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
CHERP-207ENST00000600432 ATP10DQ9P241 1426 aa16.39■□□□□ 0.21
CHERP-207ENST00000600432 KRT24Q2M2I5 525 aa16.39■□□□□ 0.21
CHERP-207ENST00000600432 TTLL7Q6ZT98 887 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms