RNA–Protein interactions for RNA: ENST00000599946.2

AC009041.1-202, humanhuman

TSL 5 BASIC

Gene AC009041.1, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-202ENST00000599946 QSER1Q2KHR3 1735 aa17.03■□□□□ 0.32
AC009041.1-202ENST00000599946 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.32
AC009041.1-202ENST00000599946 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.32
AC009041.1-202ENST00000599946 MSL1Q68DK7 614 aa17.02■□□□□ 0.32
AC009041.1-202ENST00000599946 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
AC009041.1-202ENST00000599946 TAF1LQ8IZX4 1826 aa17.01■□□□□ 0.31
AC009041.1-202ENST00000599946 A0A087WZG4 1122 aa17.01■□□□□ 0.31
AC009041.1-202ENST00000599946 CHL1O00533 1208 aa17.01■□□□□ 0.31
AC009041.1-202ENST00000599946 GIGYF1O75420 1035 aaPredicted RBP17.01■□□□□ 0.31
AC009041.1-202ENST00000599946 GYS1P13807 737 aa17.01■□□□□ 0.31
AC009041.1-202ENST00000599946 IL6STP40189 918 aaPredicted RBP17.01■□□□□ 0.31
AC009041.1-202ENST00000599946 USP42Q9H9J4 1324 aaKnown RBP17■□□□□ 0.31
AC009041.1-202ENST00000599946 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
AC009041.1-202ENST00000599946 CCDC27Q2M243 656 aa17■□□□□ 0.31
AC009041.1-202ENST00000599946 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 ZPR1O75312 459 aa16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 A1BGP04217 495 aa16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 NPM2Q86SE8 214 aaKnown RBP16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 SYT17Q9BSW7 474 aa16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 FHDC1Q9C0D6 1143 aaPredicted RBP16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 NARFQ9UHQ1 456 aa16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 COL15A1P39059 1388 aa16.99■□□□□ 0.31
AC009041.1-202ENST00000599946 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 UBR2Q8IWV8 1755 aa16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 TJP1Q07157 1748 aa16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 MMP10P09238 476 aa16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 IFT57Q9NWB7 429 aa16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 SRP68Q9UHB9 627 aaKnown RBP16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
AC009041.1-202ENST00000599946 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
AC009041.1-202ENST00000599946 USPL1Q5W0Q7 1092 aa16.96■□□□□ 0.31
AC009041.1-202ENST00000599946 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
AC009041.1-202ENST00000599946 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.31
AC009041.1-202ENST00000599946 ERBB4Q15303 1308 aa16.96■□□□□ 0.3
AC009041.1-202ENST00000599946 GNAI1P63096 354 aa16.95■□□□□ 0.3
AC009041.1-202ENST00000599946 FAM9BQ8IZU0 186 aa16.95■□□□□ 0.3
AC009041.1-202ENST00000599946 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
AC009041.1-202ENST00000599946 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
AC009041.1-202ENST00000599946 RGL2O15211 777 aa16.94■□□□□ 0.3
AC009041.1-202ENST00000599946 HOXB7P09629 217 aa16.94■□□□□ 0.3
AC009041.1-202ENST00000599946 FKBP8Q14318 412 aa16.94■□□□□ 0.3
AC009041.1-202ENST00000599946 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
AC009041.1-202ENST00000599946 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
AC009041.1-202ENST00000599946 TM4SF1P30408 202 aa16.93■□□□□ 0.3
AC009041.1-202ENST00000599946 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
AC009041.1-202ENST00000599946 WWC1Q8IX03 1113 aa16.93■□□□□ 0.3
AC009041.1-202ENST00000599946 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
AC009041.1-202ENST00000599946 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
AC009041.1-202ENST00000599946 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
AC009041.1-202ENST00000599946 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
AC009041.1-202ENST00000599946 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
AC009041.1-202ENST00000599946 BCL2L12Q9HB09 334 aa16.92■□□□□ 0.3
AC009041.1-202ENST00000599946 MBIPQ9NS73 344 aa16.92■□□□□ 0.3
AC009041.1-202ENST00000599946 TBC1D2BQ9UPU7 963 aa16.92■□□□□ 0.3
AC009041.1-202ENST00000599946 IL16Q14005 1332 aa16.92■□□□□ 0.3
AC009041.1-202ENST00000599946 COL24A1Q17RW2 1714 aa16.91■□□□□ 0.3
AC009041.1-202ENST00000599946 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
AC009041.1-202ENST00000599946 CAMTA2O94983 1202 aa16.91■□□□□ 0.3
AC009041.1-202ENST00000599946 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
AC009041.1-202ENST00000599946 KLHL34Q8N239 644 aa16.91■□□□□ 0.3
AC009041.1-202ENST00000599946 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
AC009041.1-202ENST00000599946 PIP4K2AP48426 406 aaPredicted RBP16.9■□□□□ 0.3
AC009041.1-202ENST00000599946 NFIXQ14938 502 aa16.9■□□□□ 0.3
AC009041.1-202ENST00000599946 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
AC009041.1-202ENST00000599946 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
AC009041.1-202ENST00000599946 EIF2S2P20042 333 aaKnown RBP16.89■□□□□ 0.29
AC009041.1-202ENST00000599946 DDR1Q08345 913 aa16.89■□□□□ 0.29
AC009041.1-202ENST00000599946 WDR63Q8IWG1 891 aa16.89■□□□□ 0.29
AC009041.1-202ENST00000599946 CHMP4AQ9BY43 222 aa16.89■□□□□ 0.29
AC009041.1-202ENST00000599946 ZNF652Q9Y2D9 606 aa16.89■□□□□ 0.29
AC009041.1-202ENST00000599946 TGFB2P61812 414 aa16.88■□□□□ 0.29
AC009041.1-202ENST00000599946 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
AC009041.1-202ENST00000599946 ERVV-1B6SEH8 477 aa16.87■□□□□ 0.29
AC009041.1-202ENST00000599946 KRT24Q2M2I5 525 aa16.87■□□□□ 0.29
AC009041.1-202ENST00000599946 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
AC009041.1-202ENST00000599946 NLGN2Q8NFZ4 835 aa16.87■□□□□ 0.29
AC009041.1-202ENST00000599946 PDIA6Q15084 440 aa16.86■□□□□ 0.29
AC009041.1-202ENST00000599946 HDGFL1Q5TGJ6 251 aa16.86■□□□□ 0.29
AC009041.1-202ENST00000599946 TBC1D9BQ66K14 1250 aa16.86■□□□□ 0.29
AC009041.1-202ENST00000599946 LRP10Q7Z4F1 713 aa16.86■□□□□ 0.29
AC009041.1-202ENST00000599946 SERPINB2P05120 415 aa16.85■□□□□ 0.29
AC009041.1-202ENST00000599946 MYL6BP14649 208 aa16.85■□□□□ 0.29
AC009041.1-202ENST00000599946 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
AC009041.1-202ENST00000599946 SETDB2Q96T68 719 aa16.85■□□□□ 0.29
AC009041.1-202ENST00000599946 DDX21Q9NR30 783 aaKnown RBP eCLIP16.85■□□□□ 0.29
AC009041.1-202ENST00000599946 C10orf71Q711Q0 1435 aa16.85■□□□□ 0.29
AC009041.1-202ENST00000599946 DBF4Q9UBU7 674 aaPredicted RBP16.84■□□□□ 0.29
AC009041.1-202ENST00000599946 SALL2Q9Y467 1007 aaPredicted RBP16.84■□□□□ 0.29
AC009041.1-202ENST00000599946 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
AC009041.1-202ENST00000599946 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
AC009041.1-202ENST00000599946 BICDL1Q6ZP65 573 aa16.83■□□□□ 0.28
AC009041.1-202ENST00000599946 CARMIL3Q8ND23 1372 aa16.83■□□□□ 0.28
AC009041.1-202ENST00000599946 PROSER3Q2NL68 480 aa16.82■□□□□ 0.28
AC009041.1-202ENST00000599946 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
AC009041.1-202ENST00000599946 C8orf58Q8NAV2 365 aa16.82■□□□□ 0.28
AC009041.1-202ENST00000599946 C4AP0C0L4 1744 aa16.82■□□□□ 0.28
AC009041.1-202ENST00000599946 ZNF521Q96K83 1311 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms