RNA–Protein interactions for RNA: ENST00000599362.5

SNRPA-206, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-206ENST00000599362 STARD3NLO95772 234 aa24.84■■□□□ 1.57
SNRPA-206ENST00000599362 USPL1Q5W0Q7 1092 aa24.84■■□□□ 1.57
SNRPA-206ENST00000599362 NARFQ9UHQ1 456 aa24.84■■□□□ 1.57
SNRPA-206ENST00000599362 TEX13AQ9BXU3 409 aaPredicted RBP24.83■■□□□ 1.57
SNRPA-206ENST00000599362 WWC3Q9ULE0 1092 aa24.83■■□□□ 1.57
SNRPA-206ENST00000599362 N4BP2Q86UW6 1770 aaPredicted RBP24.82■■□□□ 1.56
SNRPA-206ENST00000599362 A0A0G2JLW4 131 aa24.82■■□□□ 1.56
SNRPA-206ENST00000599362 POLRMTO00411 1230 aaKnown RBP24.82■■□□□ 1.56
SNRPA-206ENST00000599362 FMNL2Q96PY5 1086 aa24.82■■□□□ 1.56
SNRPA-206ENST00000599362 HTATSF1O43719 755 aaKnown RBP24.81■■□□□ 1.56
SNRPA-206ENST00000599362 EIF5P55010 431 aaKnown RBP24.81■■□□□ 1.56
SNRPA-206ENST00000599362 BTBD11A6QL63 1104 aa24.8■■□□□ 1.56
SNRPA-206ENST00000599362 DPEP1P16444 411 aa24.8■■□□□ 1.56
SNRPA-206ENST00000599362 CANXP27824 592 aaKnown RBP24.8■■□□□ 1.56
SNRPA-206ENST00000599362 RTF1Q92541 710 aaKnown RBP24.8■■□□□ 1.56
SNRPA-206ENST00000599362 BCL2L12Q9HB09 334 aa24.8■■□□□ 1.56
SNRPA-206ENST00000599362 ADCY9O60503 1353 aa24.8■■□□□ 1.56
SNRPA-206ENST00000599362 KCNQ3O43525 872 aa24.79■■□□□ 1.56
SNRPA-206ENST00000599362 KCNA3P22001 575 aa24.78■■□□□ 1.56
SNRPA-206ENST00000599362 MCM10Q7L590 875 aa24.78■■□□□ 1.56
SNRPA-206ENST00000599362 BRCA1P38398 1863 aaKnown RBP24.78■■□□□ 1.56
SNRPA-206ENST00000599362 NFIXQ14938 502 aa24.77■■□□□ 1.56
SNRPA-206ENST00000599362 A0A087WZG4 1122 aa24.76■■□□□ 1.55
SNRPA-206ENST00000599362 BCS1LQ9Y276 419 aa24.76■■□□□ 1.55
SNRPA-206ENST00000599362 ATP10DQ9P241 1426 aa24.76■■□□□ 1.55
SNRPA-206ENST00000599362 IL6STP40189 918 aaPredicted RBP24.75■■□□□ 1.55
SNRPA-206ENST00000599362 PLEKHF1Q96S99 279 aa24.75■■□□□ 1.55
SNRPA-206ENST00000599362 NRXN2Q9P2S2 1712 aa24.75■■□□□ 1.55
SNRPA-206ENST00000599362 DCTN1Q14203 1278 aa24.74■■□□□ 1.55
SNRPA-206ENST00000599362 A1BGP04217 495 aa24.73■■□□□ 1.55
SNRPA-206ENST00000599362 RALBP1Q15311 655 aa24.73■■□□□ 1.55
SNRPA-206ENST00000599362 PIM2Q9P1W9 311 aa24.73■■□□□ 1.55
SNRPA-206ENST00000599362 C1QTNF8P60827 252 aa24.72■■□□□ 1.55
SNRPA-206ENST00000599362 AFDNP55196 1824 aaKnown RBP24.72■■□□□ 1.55
SNRPA-206ENST00000599362 GIGYF1O75420 1035 aaPredicted RBP24.71■■□□□ 1.55
SNRPA-206ENST00000599362 NEFMP07197 916 aa24.71■■□□□ 1.55
SNRPA-206ENST00000599362 USP16Q9Y5T5 823 aa24.71■■□□□ 1.55
SNRPA-206ENST00000599362 SERPINB2P05120 415 aa24.7■■□□□ 1.54
SNRPA-206ENST00000599362 SNRPA1P09661 255 aaKnown RBP24.7■■□□□ 1.54
SNRPA-206ENST00000599362 TAF7Q15545 349 aaPredicted RBP24.7■■□□□ 1.54
SNRPA-206ENST00000599362 ARFGEF1Q9Y6D6 1849 aa24.7■■□□□ 1.54
SNRPA-206ENST00000599362 SCN7AQ01118 1682 aa24.69■■□□□ 1.54
SNRPA-206ENST00000599362 CHRNA5P30532 468 aa24.69■■□□□ 1.54
SNRPA-206ENST00000599362 PRAMEF22A3QJZ6 481 aa24.68■■□□□ 1.54
SNRPA-206ENST00000599362 DDX10Q13206 875 aaKnown RBP24.68■■□□□ 1.54
SNRPA-206ENST00000599362 NFE2L2Q16236 605 aa24.68■■□□□ 1.54
SNRPA-206ENST00000599362 DALRD3Q5D0E6 543 aaKnown RBP24.68■■□□□ 1.54
SNRPA-206ENST00000599362 PNNQ9H307 717 aaKnown RBP24.68■■□□□ 1.54
SNRPA-206ENST00000599362 TBC1D2BQ9UPU7 963 aa24.68■■□□□ 1.54
SNRPA-206ENST00000599362 DLG5Q8TDM6 1919 aa24.68■■□□□ 1.54
SNRPA-206ENST00000599362 TBC1D9BQ66K14 1250 aa24.67■■□□□ 1.54
SNRPA-206ENST00000599362 CAMTA2O94983 1202 aa24.66■■□□□ 1.54
SNRPA-206ENST00000599362 ARHGAP27Q6ZUM4 889 aa24.66■■□□□ 1.54
SNRPA-206ENST00000599362 ZNF330Q9Y3S2 320 aaPredicted RBP24.66■■□□□ 1.54
SNRPA-206ENST00000599362 GPBP1L1Q9HC44 474 aaPredicted RBP24.65■■□□□ 1.54
SNRPA-206ENST00000599362 BICDL1Q6ZP65 573 aa24.64■■□□□ 1.54
SNRPA-206ENST00000599362 PNISRQ8TF01 805 aaKnown RBP24.64■■□□□ 1.54
SNRPA-206ENST00000599362 NPM2Q86SE8 214 aaKnown RBP24.63■■□□□ 1.53
SNRPA-206ENST00000599362 DZIP3Q86Y13 1208 aaKnown RBP24.63■■□□□ 1.53
SNRPA-206ENST00000599362 MIS18AQ9NYP9 233 aa24.63■■□□□ 1.53
SNRPA-206ENST00000599362 CARMIL3Q8ND23 1372 aa24.63■■□□□ 1.53
SNRPA-206ENST00000599362 MYBBP1AQ9BQG0 1328 aaKnown RBP24.62■■□□□ 1.53
SNRPA-206ENST00000599362 MAPK8IP3Q9UPT6 1336 aa24.62■■□□□ 1.53
SNRPA-206ENST00000599362 BCORQ6W2J9 1755 aa24.62■■□□□ 1.53
SNRPA-206ENST00000599362 KDM3BQ7LBC6 1761 aa24.62■■□□□ 1.53
SNRPA-206ENST00000599362 DLEC1Q9Y238 1755 aa24.62■■□□□ 1.53
SNRPA-206ENST00000599362 NBPF26B4DH59 902 aa24.61■■□□□ 1.53
SNRPA-206ENST00000599362 PIP4K2AP48426 406 aaPredicted RBP24.61■■□□□ 1.53
SNRPA-206ENST00000599362 NBPF10Q6P3W6 841 aaKnown RBP24.61■■□□□ 1.53
SNRPA-206ENST00000599362 NBPF15Q8N660 670 aa24.61■■□□□ 1.53
SNRPA-206ENST00000599362 ZNF526Q8TF50 670 aaPredicted RBP24.6■■□□□ 1.53
SNRPA-206ENST00000599362 PRR5LQ6MZQ0 368 aa24.59■■□□□ 1.53
SNRPA-206ENST00000599362 CLEC4GQ6UXB4 293 aa24.59■■□□□ 1.53
SNRPA-206ENST00000599362 THUMPD2Q9BTF0 503 aaKnown RBP24.59■■□□□ 1.53
SNRPA-206ENST00000599362 RGL2O15211 777 aa24.58■■□□□ 1.53
SNRPA-206ENST00000599362 C2CD5Q86YS7 1000 aa24.58■■□□□ 1.53
SNRPA-206ENST00000599362 SETDB2Q96T68 719 aa24.58■■□□□ 1.53
SNRPA-206ENST00000599362 BRIP1Q9BX63 1249 aa24.58■■□□□ 1.53
SNRPA-206ENST00000599362 ANKRD31Q8N7Z5 1873 aa24.58■■□□□ 1.52
SNRPA-206ENST00000599362 LAMB4A4D0S4 1761 aa24.57■■□□□ 1.52
SNRPA-206ENST00000599362 H0YIN7 160 aa24.57■■□□□ 1.52
SNRPA-206ENST00000599362 EIF4A1P60842 406 aaKnown RBP24.57■■□□□ 1.52
SNRPA-206ENST00000599362 PDZRN3Q9UPQ7 1066 aa24.57■■□□□ 1.52
SNRPA-206ENST00000599362 C9orf131Q5VYM1 1079 aa24.56■■□□□ 1.52
SNRPA-206ENST00000599362 TTLL6Q8N841 843 aa24.56■■□□□ 1.52
SNRPA-206ENST00000599362 SENP3-EIF4A1A0A087X0R7 540 aa24.54■■□□□ 1.52
SNRPA-206ENST00000599362 KIF3CO14782 793 aa24.54■■□□□ 1.52
SNRPA-206ENST00000599362 PDE6BP35913 854 aa24.54■■□□□ 1.52
SNRPA-206ENST00000599362 ZNF652Q9Y2D9 606 aa24.54■■□□□ 1.52
SNRPA-206ENST00000599362 TMPOP42166 694 aaKnown RBP24.53■■□□□ 1.52
SNRPA-206ENST00000599362 RIPK4P57078 832 aa24.53■■□□□ 1.52
SNRPA-206ENST00000599362 CNBD1Q8NA66 436 aa24.53■■□□□ 1.52
SNRPA-206ENST00000599362 CCDC24Q8N4L8 307 aa24.52■■□□□ 1.52
SNRPA-206ENST00000599362 SBF1O95248 1867 aa24.51■■□□□ 1.51
SNRPA-206ENST00000599362 COL11A2P13942 1736 aaPredicted RBP24.5■■□□□ 1.51
SNRPA-206ENST00000599362 ST5P78524 1137 aa24.5■■□□□ 1.51
SNRPA-206ENST00000599362 PRKRIP1Q9H875 184 aaPredicted RBP24.5■■□□□ 1.51
SNRPA-206ENST00000599362 BABAM1Q9NWV8 329 aa24.5■■□□□ 1.51
SNRPA-206ENST00000599362 RNF181Q9P0P0 153 aa24.5■■□□□ 1.51
SNRPA-206ENST00000599362 LMOD3Q0VAK6 560 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms