RNA–Protein interactions for RNA: ENST00000599362.5

SNRPA-206, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-206ENST00000599362 NISCHQ9Y2I1 1504 aa46.28■■■■■ 5
SNRPA-206ENST00000599362 CCDC180Q9P1Z9 1646 aa41.38■■■■■ 4.21
SNRPA-206ENST00000599362 ABCC9O60706 1549 aa41.01■■■■■ 4.16
SNRPA-206ENST00000599362 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
SNRPA-206ENST00000599362 NACADO15069 1562 aa39.06■■■■□ 3.84
SNRPA-206ENST00000599362 DCAF8L2P0C7V8 631 aa38.79■■■■□ 3.8
SNRPA-206ENST00000599362 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
SNRPA-206ENST00000599362 ZCCHC6Q5VYS8 1495 aaKnown RBP38.44■■■■□ 3.74
SNRPA-206ENST00000599362 DCAF1Q9Y4B6 1507 aa38.3■■■■□ 3.72
SNRPA-206ENST00000599362 UNC13AQ9UPW8 1703 aa38.29■■■■□ 3.72
SNRPA-206ENST00000599362 PABPN1Q86U42 306 aaKnown RBP eCLIP38.22■■■■□ 3.713e-10■■■□□ 15.3
SNRPA-206ENST00000599362 DNAJC5BQ9UF47 199 aa38.22■■■■□ 3.71
SNRPA-206ENST00000599362 BICRAQ9NZM4 1560 aa38.09■■■■□ 3.69
SNRPA-206ENST00000599362 SCRIBQ14160 1630 aa37.66■■■■□ 3.62
SNRPA-206ENST00000599362 SHROOM4Q9ULL8 1493 aa37.65■■■■□ 3.62
SNRPA-206ENST00000599362 EIF4G1Q04637 1599 aaKnown RBP37.1■■■■□ 3.53
SNRPA-206ENST00000599362 CC2D2AQ9P2K1 1620 aa37.08■■■■□ 3.53
SNRPA-206ENST00000599362 CECR2Q9BXF3 1484 aa36.93■■■■□ 3.5
SNRPA-206ENST00000599362 NCAPD3P42695 1498 aa36.07■■■■□ 3.37
SNRPA-206ENST00000599362 SMARCA4P51532 1647 aa36.01■■■■□ 3.35
SNRPA-206ENST00000599362 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
SNRPA-206ENST00000599362 SMARCA2P51531 1590 aa35.89■■■■□ 3.34
SNRPA-206ENST00000599362 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
SNRPA-206ENST00000599362 HMGXB3Q12766 1538 aa35.82■■■■□ 3.32
SNRPA-206ENST00000599362 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
SNRPA-206ENST00000599362 MROH2BQ7Z745 1585 aa35.65■■■■□ 3.3
SNRPA-206ENST00000599362 BAZ1BQ9UIG0 1483 aaKnown RBP35.61■■■■□ 3.29
SNRPA-206ENST00000599362 ERCC6Q03468 1493 aa35.37■■■■□ 3.25
SNRPA-206ENST00000599362 NESP48681 1621 aa35.33■■■■□ 3.25
SNRPA-206ENST00000599362 CUX2O14529 1486 aa35.27■■■■□ 3.24
SNRPA-206ENST00000599362 WIZO95785 1651 aa35.21■■■■□ 3.23
SNRPA-206ENST00000599362 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
SNRPA-206ENST00000599362 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
SNRPA-206ENST00000599362 CADPSQ9ULU8 1353 aa34.97■■■■□ 3.19
SNRPA-206ENST00000599362 PDS5BQ9NTI5 1447 aa34.96■■■■□ 3.19
SNRPA-206ENST00000599362 THOC2Q8NI27 1593 aaKnown RBP34.93■■■■□ 3.18
SNRPA-206ENST00000599362 KIF21AQ7Z4S6 1674 aa34.86■■■■□ 3.17
SNRPA-206ENST00000599362 DNAJC5Q9H3Z4 198 aa34.86■■■■□ 3.17
SNRPA-206ENST00000599362 TOP2AP11388 1531 aaKnown RBP34.82■■■■□ 3.16
SNRPA-206ENST00000599362 CFTRP13569 1480 aa34.65■■■■□ 3.14
SNRPA-206ENST00000599362 MRC2Q9UBG0 1479 aa34.63■■■■□ 3.13
SNRPA-206ENST00000599362 FANCD2Q9BXW9 1451 aa34.55■■■■□ 3.12
SNRPA-206ENST00000599362 CEP164Q9UPV0 1460 aa34.55■■■■□ 3.12
SNRPA-206ENST00000599362 WDR62O43379 1518 aa34.55■■■■□ 3.12
SNRPA-206ENST00000599362 CCDC88BA6NC98 1476 aa34.42■■■■□ 3.1
SNRPA-206ENST00000599362 PRDM2Q13029 1718 aa34.28■■■■□ 3.08
SNRPA-206ENST00000599362 URB2Q14146 1524 aaKnown RBP34.25■■■■□ 3.07
SNRPA-206ENST00000599362 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
SNRPA-206ENST00000599362 ABCC8Q09428 1581 aa33.91■■■■□ 3.02
SNRPA-206ENST00000599362 IFT140Q96RY7 1462 aa33.87■■■■□ 3.01
SNRPA-206ENST00000599362 DNMBPQ6XZF7 1577 aa33.84■■■■□ 3.01
SNRPA-206ENST00000599362 ZNF608Q9ULD9 1512 aaPredicted RBP33.76■■■■□ 3
SNRPA-206ENST00000599362 OSCARQ8IYS5 282 aa33.68■■■□□ 2.98
SNRPA-206ENST00000599362 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
SNRPA-206ENST00000599362 POLA1P09884 1462 aaPredicted RBP33.62■■■□□ 2.97
SNRPA-206ENST00000599362 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
SNRPA-206ENST00000599362 EIF4G3O43432 1585 aaKnown RBP33.58■■■□□ 2.97
SNRPA-206ENST00000599362 AQRO60306 1485 aaKnown RBP eCLIP33.49■■■□□ 2.955e-7■■■■■ 41.9
SNRPA-206ENST00000599362 CUX1P39880 1505 aa33.47■■■□□ 2.95
SNRPA-206ENST00000599362 SOGA1O94964 1423 aa33.46■■■□□ 2.95
SNRPA-206ENST00000599362 RAD54L2Q9Y4B4 1467 aa33.46■■■□□ 2.95
SNRPA-206ENST00000599362 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
SNRPA-206ENST00000599362 TRIM41Q8WV44 630 aa33.37■■■□□ 2.93
SNRPA-206ENST00000599362 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
SNRPA-206ENST00000599362 WDR97A6NE52 1622 aa33.33■■■□□ 2.93
SNRPA-206ENST00000599362 CHD1O14646 1710 aa33.24■■■□□ 2.91
SNRPA-206ENST00000599362 RIMBP3CA6NJZ7 1639 aa33.19■■■□□ 2.9
SNRPA-206ENST00000599362 RIMBP3BA6NNM3 1639 aa33.19■■■□□ 2.9
SNRPA-206ENST00000599362 RIMBP3Q9UFD9 1639 aa33.19■■■□□ 2.9
SNRPA-206ENST00000599362 SNAPC4Q5SXM2 1469 aa33.16■■■□□ 2.9
SNRPA-206ENST00000599362 ARHGEF11O15085 1522 aa33.14■■■□□ 2.9
SNRPA-206ENST00000599362 GRIN2BQ13224 1484 aa33.14■■■□□ 2.9
SNRPA-206ENST00000599362 FBLN2P98095 1184 aa33.14■■■□□ 2.9
SNRPA-206ENST00000599362 ABCA10Q8WWZ4 1543 aa33.12■■■□□ 2.89
SNRPA-206ENST00000599362 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
SNRPA-206ENST00000599362 GAPVD1Q14C86 1478 aa33.05■■■□□ 2.88
SNRPA-206ENST00000599362 WRNQ14191 1432 aaPredicted RBP eCLIP33.03■■■□□ 2.88
SNRPA-206ENST00000599362 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
SNRPA-206ENST00000599362 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
SNRPA-206ENST00000599362 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
SNRPA-206ENST00000599362 CHMP7Q8WUX9 453 aaPredicted RBP33■■■□□ 2.87
SNRPA-206ENST00000599362 SYNJ2O15056 1496 aa32.99■■■□□ 2.87
SNRPA-206ENST00000599362 PBRM1Q86U86 1689 aa32.99■■■□□ 2.87
SNRPA-206ENST00000599362 SYNJ1O43426 1573 aa32.97■■■□□ 2.87
SNRPA-206ENST00000599362 CLASP1Q7Z460 1538 aa32.93■■■□□ 2.86
SNRPA-206ENST00000599362 ARAP1Q96P48 1450 aa32.85■■■□□ 2.85
SNRPA-206ENST00000599362 CYB5RLQ6IPT4 315 aa32.84■■■□□ 2.85
SNRPA-206ENST00000599362 ADAMTS12P58397 1594 aa32.73■■■□□ 2.83
SNRPA-206ENST00000599362 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
SNRPA-206ENST00000599362 ERICH3Q5RHP9 1530 aa32.7■■■□□ 2.83
SNRPA-206ENST00000599362 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
SNRPA-206ENST00000599362 NUP160Q12769 1436 aa32.62■■■□□ 2.81
SNRPA-206ENST00000599362 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
SNRPA-206ENST00000599362 SHROOM2Q13796 1616 aa32.43■■■□□ 2.78
SNRPA-206ENST00000599362 ERCC6L2Q5T890 1561 aa32.41■■■□□ 2.78
SNRPA-206ENST00000599362 KIF27Q86VH2 1401 aa32.39■■■□□ 2.78
SNRPA-206ENST00000599362 IGF1RP08069 1367 aa32.36■■■□□ 2.77
SNRPA-206ENST00000599362 TRHP20396 242 aaPredicted RBP32.32■■■□□ 2.76
SNRPA-206ENST00000599362 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.76
SNRPA-206ENST00000599362 JPH4Q96JJ6 628 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms