RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 BTBD11A6QL63 1104 aa23.86■■□□□ 1.41
CHMP2A-203ENST00000597209 TM4SF1P30408 202 aa23.86■■□□□ 1.41
CHMP2A-203ENST00000597209 NARFQ9UHQ1 456 aa23.86■■□□□ 1.41
CHMP2A-203ENST00000597209 KIAA1551Q9HCM1 1747 aa23.86■■□□□ 1.41
CHMP2A-203ENST00000597209 COL15A1P39059 1388 aa23.86■■□□□ 1.41
CHMP2A-203ENST00000597209 PXDNLA1KZ92 1463 aa23.86■■□□□ 1.41
CHMP2A-203ENST00000597209 USPL1Q5W0Q7 1092 aa23.85■■□□□ 1.41
CHMP2A-203ENST00000597209 NEFMP07197 916 aa23.84■■□□□ 1.41
CHMP2A-203ENST00000597209 EIF5P55010 431 aaKnown RBP23.83■■□□□ 1.41
CHMP2A-203ENST00000597209 DDR1Q08345 913 aa23.83■■□□□ 1.41
CHMP2A-203ENST00000597209 MCM10Q7L590 875 aa23.83■■□□□ 1.41
CHMP2A-203ENST00000597209 PLEKHF1Q96S99 279 aa23.83■■□□□ 1.41
CHMP2A-203ENST00000597209 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
CHMP2A-203ENST00000597209 A0A087WZG4 1122 aa23.82■■□□□ 1.4
CHMP2A-203ENST00000597209 CANXP27824 592 aaKnown RBP23.82■■□□□ 1.4
CHMP2A-203ENST00000597209 DDX10Q13206 875 aaKnown RBP23.82■■□□□ 1.4
CHMP2A-203ENST00000597209 POLRMTO00411 1230 aaKnown RBP23.81■■□□□ 1.4
CHMP2A-203ENST00000597209 KCNQ3O43525 872 aa23.81■■□□□ 1.4
CHMP2A-203ENST00000597209 BCL2L12Q9HB09 334 aa23.8■■□□□ 1.4
CHMP2A-203ENST00000597209 N4BP2Q86UW6 1770 aaPredicted RBP23.8■■□□□ 1.4
CHMP2A-203ENST00000597209 A0A0G2JLW4 131 aa23.79■■□□□ 1.4
CHMP2A-203ENST00000597209 IL6STP40189 918 aaPredicted RBP23.79■■□□□ 1.4
CHMP2A-203ENST00000597209 DCTN1Q14203 1278 aa23.79■■□□□ 1.4
CHMP2A-203ENST00000597209 GOLGB1Q14789 3259 aaKnown RBP23.79■■□□□ 1.4
CHMP2A-203ENST00000597209 DPEP1P16444 411 aa23.78■■□□□ 1.4
CHMP2A-203ENST00000597209 TAF7Q15545 349 aaPredicted RBP23.78■■□□□ 1.4
CHMP2A-203ENST00000597209 NFIXQ14938 502 aa23.77■■□□□ 1.4
CHMP2A-203ENST00000597209 KCNA3P22001 575 aa23.76■■□□□ 1.39
CHMP2A-203ENST00000597209 NFE2L2Q16236 605 aa23.76■■□□□ 1.39
CHMP2A-203ENST00000597209 WWC3Q9ULE0 1092 aa23.76■■□□□ 1.39
CHMP2A-203ENST00000597209 DLG5Q8TDM6 1919 aa23.76■■□□□ 1.39
CHMP2A-203ENST00000597209 NRXN2Q9P2S2 1712 aa23.76■■□□□ 1.39
CHMP2A-203ENST00000597209 BRCA1P38398 1863 aaKnown RBP23.75■■□□□ 1.39
CHMP2A-203ENST00000597209 SNRPA1P09661 255 aaKnown RBP23.75■■□□□ 1.39
CHMP2A-203ENST00000597209 USP16Q9Y5T5 823 aa23.75■■□□□ 1.39
CHMP2A-203ENST00000597209 MYBBP1AQ9BQG0 1328 aaKnown RBP23.75■■□□□ 1.39
CHMP2A-203ENST00000597209 A1BGP04217 495 aa23.74■■□□□ 1.39
CHMP2A-203ENST00000597209 PNISRQ8TF01 805 aaKnown RBP23.74■■□□□ 1.39
CHMP2A-203ENST00000597209 BCS1LQ9Y276 419 aa23.74■■□□□ 1.39
CHMP2A-203ENST00000597209 MAPK8IP3Q9UPT6 1336 aa23.73■■□□□ 1.39
CHMP2A-203ENST00000597209 SERPINB2P05120 415 aa23.72■■□□□ 1.39
CHMP2A-203ENST00000597209 PIM2Q9P1W9 311 aa23.72■■□□□ 1.39
CHMP2A-203ENST00000597209 ADCY9O60503 1353 aa23.72■■□□□ 1.39
CHMP2A-203ENST00000597209 SCN7AQ01118 1682 aa23.72■■□□□ 1.39
CHMP2A-203ENST00000597209 AFDNP55196 1824 aaKnown RBP23.72■■□□□ 1.39
CHMP2A-203ENST00000597209 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
CHMP2A-203ENST00000597209 PRAMEF22A3QJZ6 481 aa23.7■■□□□ 1.38
CHMP2A-203ENST00000597209 TBC1D2BQ9UPU7 963 aa23.7■■□□□ 1.38
CHMP2A-203ENST00000597209 ATP10DQ9P241 1426 aa23.69■■□□□ 1.38
CHMP2A-203ENST00000597209 ARFGEF1Q9Y6D6 1849 aa23.69■■□□□ 1.38
CHMP2A-203ENST00000597209 ZNF330Q9Y3S2 320 aaPredicted RBP23.69■■□□□ 1.38
CHMP2A-203ENST00000597209 KDM3BQ7LBC6 1761 aa23.68■■□□□ 1.38
CHMP2A-203ENST00000597209 CAMTA2O94983 1202 aa23.68■■□□□ 1.38
CHMP2A-203ENST00000597209 CHRNA5P30532 468 aa23.67■■□□□ 1.38
CHMP2A-203ENST00000597209 DALRD3Q5D0E6 543 aaKnown RBP23.67■■□□□ 1.38
CHMP2A-203ENST00000597209 TBC1D9BQ66K14 1250 aa23.67■■□□□ 1.38
CHMP2A-203ENST00000597209 DZIP3Q86Y13 1208 aaKnown RBP23.67■■□□□ 1.38
CHMP2A-203ENST00000597209 MIS18AQ9NYP9 233 aa23.67■■□□□ 1.38
CHMP2A-203ENST00000597209 BICDL1Q6ZP65 573 aa23.66■■□□□ 1.38
CHMP2A-203ENST00000597209 BCORQ6W2J9 1755 aa23.65■■□□□ 1.38
CHMP2A-203ENST00000597209 RGL2O15211 777 aa23.65■■□□□ 1.38
CHMP2A-203ENST00000597209 ARHGAP27Q6ZUM4 889 aa23.65■■□□□ 1.38
CHMP2A-203ENST00000597209 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
CHMP2A-203ENST00000597209 NBPF26B4DH59 902 aa23.64■■□□□ 1.37
CHMP2A-203ENST00000597209 GIGYF1O75420 1035 aaPredicted RBP23.64■■□□□ 1.37
CHMP2A-203ENST00000597209 ZEB1P37275 1124 aaPredicted RBP23.64■■□□□ 1.37
CHMP2A-203ENST00000597209 EIF4A1P60842 406 aaKnown RBP23.64■■□□□ 1.37
CHMP2A-203ENST00000597209 NBPF10Q6P3W6 841 aaKnown RBP23.64■■□□□ 1.37
CHMP2A-203ENST00000597209 CLEC4GQ6UXB4 293 aa23.64■■□□□ 1.37
CHMP2A-203ENST00000597209 NBPF15Q8N660 670 aa23.64■■□□□ 1.37
CHMP2A-203ENST00000597209 LAMB4A4D0S4 1761 aa23.64■■□□□ 1.37
CHMP2A-203ENST00000597209 RIPK4P57078 832 aa23.63■■□□□ 1.37
CHMP2A-203ENST00000597209 C1QTNF8P60827 252 aa23.63■■□□□ 1.37
CHMP2A-203ENST00000597209 THUMPD2Q9BTF0 503 aaKnown RBP23.63■■□□□ 1.37
CHMP2A-203ENST00000597209 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
CHMP2A-203ENST00000597209 PDZRN3Q9UPQ7 1066 aa23.63■■□□□ 1.37
CHMP2A-203ENST00000597209 DLEC1Q9Y238 1755 aa23.63■■□□□ 1.37
CHMP2A-203ENST00000597209 TMPOP42166 694 aaKnown RBP23.62■■□□□ 1.37
CHMP2A-203ENST00000597209 PIP4K2AP48426 406 aaPredicted RBP23.62■■□□□ 1.37
CHMP2A-203ENST00000597209 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
CHMP2A-203ENST00000597209 SETDB2Q96T68 719 aa23.62■■□□□ 1.37
CHMP2A-203ENST00000597209 BABAM1Q9NWV8 329 aa23.62■■□□□ 1.37
CHMP2A-203ENST00000597209 BRIP1Q9BX63 1249 aa23.61■■□□□ 1.37
CHMP2A-203ENST00000597209 PRR5LQ6MZQ0 368 aa23.6■■□□□ 1.37
CHMP2A-203ENST00000597209 GPBP1L1Q9HC44 474 aaPredicted RBP23.6■■□□□ 1.37
CHMP2A-203ENST00000597209 ZNF652Q9Y2D9 606 aa23.6■■□□□ 1.37
CHMP2A-203ENST00000597209 H0YIN7 160 aa23.59■■□□□ 1.37
CHMP2A-203ENST00000597209 PDE6BP35913 854 aa23.59■■□□□ 1.37
CHMP2A-203ENST00000597209 WDR43Q15061 677 aaKnown RBP eCLIP23.59■■□□□ 1.37
CHMP2A-203ENST00000597209 C2CD5Q86YS7 1000 aa23.59■■□□□ 1.37
CHMP2A-203ENST00000597209 RUNDC1Q96C34 613 aa23.59■■□□□ 1.37
CHMP2A-203ENST00000597209 TTLL6Q8N841 843 aa23.58■■□□□ 1.37
CHMP2A-203ENST00000597209 ANKRD31Q8N7Z5 1873 aa23.58■■□□□ 1.36
CHMP2A-203ENST00000597209 CNBD1Q8NA66 436 aa23.56■■□□□ 1.36
CHMP2A-203ENST00000597209 TSPYL4Q9UJ04 414 aa23.56■■□□□ 1.36
CHMP2A-203ENST00000597209 ADAMTS8Q9UP79 889 aa23.55■■□□□ 1.36
CHMP2A-203ENST00000597209 ERBB4Q15303 1308 aa23.55■■□□□ 1.36
CHMP2A-203ENST00000597209 ST5P78524 1137 aa23.54■■□□□ 1.36
CHMP2A-203ENST00000597209 CCDC146Q8IYE0 955 aa23.54■■□□□ 1.36
CHMP2A-203ENST00000597209 ERVV-1B6SEH8 477 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms