RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TOMM70O94826 608 aa14.27□□□□□ -0.13
CHMP2A-202ENST00000596708 NMRK2Q9NPI5 230 aa14.27□□□□□ -0.13
CHMP2A-202ENST00000596708 UBR2Q8IWV8 1755 aa14.27□□□□□ -0.13
CHMP2A-202ENST00000596708 MRC1P22897 1456 aa14.26□□□□□ -0.13
CHMP2A-202ENST00000596708 NARFQ9UHQ1 456 aa14.26□□□□□ -0.13
CHMP2A-202ENST00000596708 ZBTB1Q9Y2K1 713 aa14.26□□□□□ -0.13
CHMP2A-202ENST00000596708 KCPQ6ZWJ8 1503 aa14.25□□□□□ -0.13
CHMP2A-202ENST00000596708 COL15A1P39059 1388 aa14.25□□□□□ -0.13
CHMP2A-202ENST00000596708 U2SURPO15042 1029 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-202ENST00000596708 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-202ENST00000596708 C16orf71Q8IYS4 520 aaPredicted RBP14.25□□□□□ -0.13
CHMP2A-202ENST00000596708 TTC5Q8N0Z6 440 aa14.25□□□□□ -0.13
CHMP2A-202ENST00000596708 VSIG10Q8N0Z9 540 aa14.25□□□□□ -0.13
CHMP2A-202ENST00000596708 RNF181Q9P0P0 153 aa14.25□□□□□ -0.13
CHMP2A-202ENST00000596708 DLEC1Q9Y238 1755 aa14.24□□□□□ -0.13
CHMP2A-202ENST00000596708 NRXN2Q9P2S2 1712 aa14.24□□□□□ -0.13
CHMP2A-202ENST00000596708 APLP1P51693 650 aa14.24□□□□□ -0.13
CHMP2A-202ENST00000596708 NFIXQ14938 502 aa14.24□□□□□ -0.13
CHMP2A-202ENST00000596708 IFFO2Q5TF58 517 aa14.24□□□□□ -0.13
CHMP2A-202ENST00000596708 SERPINB2P05120 415 aa14.23□□□□□ -0.13
CHMP2A-202ENST00000596708 TEFQ10587 303 aa14.23□□□□□ -0.13
CHMP2A-202ENST00000596708 SIPA1L3O60292 1781 aaPredicted RBP14.23□□□□□ -0.13
CHMP2A-202ENST00000596708 CACNA1SQ13698 1873 aa14.23□□□□□ -0.13
CHMP2A-202ENST00000596708 KDM2BQ8NHM5 1336 aa14.22□□□□□ -0.13
CHMP2A-202ENST00000596708 STARD3NLO95772 234 aa14.22□□□□□ -0.13
CHMP2A-202ENST00000596708 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
CHMP2A-202ENST00000596708 BCL2L12Q9HB09 334 aa14.22□□□□□ -0.13
CHMP2A-202ENST00000596708 WDR90Q96KV7 1748 aa14.21□□□□□ -0.13
CHMP2A-202ENST00000596708 TNRC6CQ9HCJ0 1690 aaKnown RBP14.21□□□□□ -0.13
CHMP2A-202ENST00000596708 A0A087WZG4 1122 aa14.21□□□□□ -0.13
CHMP2A-202ENST00000596708 GNAT3A8MTJ3 354 aa14.21□□□□□ -0.13
CHMP2A-202ENST00000596708 GAS2L2Q8NHY3 880 aa14.21□□□□□ -0.13
CHMP2A-202ENST00000596708 RRAGCQ9HB90 399 aa14.21□□□□□ -0.13
CHMP2A-202ENST00000596708 ZNF330Q9Y3S2 320 aaPredicted RBP14.21□□□□□ -0.13
CHMP2A-202ENST00000596708 C2CD5Q86YS7 1000 aa14.2□□□□□ -0.14
CHMP2A-202ENST00000596708 IL17REQ8NFR9 667 aa14.2□□□□□ -0.14
CHMP2A-202ENST00000596708 RBM46Q8TBY0 533 aaKnown RBP14.2□□□□□ -0.14
CHMP2A-202ENST00000596708 ANKRD31Q8N7Z5 1873 aa14.2□□□□□ -0.14
CHMP2A-202ENST00000596708 DICER1Q9UPY3 1922 aaKnown RBP14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 CEP350Q5VT06 3117 aa14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 H0YIN7 160 aa14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 EIF5P55010 431 aaKnown RBP14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 RASSF7Q02833 373 aa14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 ZNF790Q6PG37 636 aa14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 TTLL6Q8N841 843 aa14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 TEX13AQ9BXU3 409 aaPredicted RBP14.19□□□□□ -0.14
CHMP2A-202ENST00000596708 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
CHMP2A-202ENST00000596708 TBC1D2BQ9UPU7 963 aa14.18□□□□□ -0.14
CHMP2A-202ENST00000596708 NPC1L1Q9UHC9 1359 aa14.18□□□□□ -0.14
CHMP2A-202ENST00000596708 HEG1Q9ULI3 1381 aa14.18□□□□□ -0.14
CHMP2A-202ENST00000596708 TBC1D9BQ66K14 1250 aa14.17□□□□□ -0.14
CHMP2A-202ENST00000596708 ZNF622Q969S3 477 aaKnown RBP eCLIP14.17□□□□□ -0.145e-9■■□□□ 12.9
CHMP2A-202ENST00000596708 CFAP53Q96M91 514 aa14.17□□□□□ -0.14
CHMP2A-202ENST00000596708 FMNL2Q96PY5 1086 aa14.17□□□□□ -0.14
CHMP2A-202ENST00000596708 TIAM2Q8IVF5 1701 aa14.17□□□□□ -0.14
CHMP2A-202ENST00000596708 BTBD11A6QL63 1104 aa14.16□□□□□ -0.14
CHMP2A-202ENST00000596708 A1BGP04217 495 aa14.16□□□□□ -0.14
CHMP2A-202ENST00000596708 LMNB1P20700 586 aa14.16□□□□□ -0.14
CHMP2A-202ENST00000596708 PRKAR2BP31323 418 aa14.16□□□□□ -0.14
CHMP2A-202ENST00000596708 FSTL1Q12841 308 aa14.16□□□□□ -0.14
CHMP2A-202ENST00000596708 CARMIL3Q8ND23 1372 aa14.16□□□□□ -0.14
CHMP2A-202ENST00000596708 SCN7AQ01118 1682 aa14.16□□□□□ -0.14
CHMP2A-202ENST00000596708 FER1L6Q2WGJ9 1857 aa14.16□□□□□ -0.14
CHMP2A-202ENST00000596708 NPHP1O15259 732 aa14.15□□□□□ -0.14
CHMP2A-202ENST00000596708 IL6STP40189 918 aaPredicted RBP14.15□□□□□ -0.14
CHMP2A-202ENST00000596708 CCDC24Q8N4L8 307 aa14.15□□□□□ -0.14
CHMP2A-202ENST00000596708 DNAJC5GQ8N7S2 189 aa14.15□□□□□ -0.14
CHMP2A-202ENST00000596708 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
CHMP2A-202ENST00000596708 NUDCQ9Y266 331 aa14.15□□□□□ -0.14
CHMP2A-202ENST00000596708 SLX4Q8IY92 1834 aa14.14□□□□□ -0.15
CHMP2A-202ENST00000596708 KCNQ3O43525 872 aa14.14□□□□□ -0.15
CHMP2A-202ENST00000596708 PDE6BP35913 854 aa14.14□□□□□ -0.15
CHMP2A-202ENST00000596708 HTRA3P83110 453 aa14.14□□□□□ -0.15
CHMP2A-202ENST00000596708 PHACTR3Q96KR7 559 aa14.14□□□□□ -0.15
CHMP2A-202ENST00000596708 PDZRN3Q9UPQ7 1066 aa14.14□□□□□ -0.15
CHMP2A-202ENST00000596708 BCORQ6W2J9 1755 aa14.14□□□□□ -0.15
CHMP2A-202ENST00000596708 ZC3H4Q9UPT8 1303 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-202ENST00000596708 COL11A2P13942 1736 aaPredicted RBP14.13□□□□□ -0.15
CHMP2A-202ENST00000596708 GLTPD2A6NH11 291 aa14.13□□□□□ -0.15
CHMP2A-202ENST00000596708 PRR5LQ6MZQ0 368 aa14.13□□□□□ -0.15
CHMP2A-202ENST00000596708 SMC1BQ8NDV3 1235 aa14.13□□□□□ -0.15
CHMP2A-202ENST00000596708 RTF1Q92541 710 aaKnown RBP14.13□□□□□ -0.15
CHMP2A-202ENST00000596708 SETDB2Q96T68 719 aa14.13□□□□□ -0.15
CHMP2A-202ENST00000596708 BRIP1Q9BX63 1249 aa14.13□□□□□ -0.15
CHMP2A-202ENST00000596708 DLG5Q8TDM6 1919 aa14.13□□□□□ -0.15
CHMP2A-202ENST00000596708 C21orf2O43822 256 aa14.12□□□□□ -0.15
CHMP2A-202ENST00000596708 U2AF1L5P0DN76 240 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-202ENST00000596708 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-202ENST00000596708 PRELPP51888 382 aa14.12□□□□□ -0.15
CHMP2A-202ENST00000596708 U2AF1Q01081 240 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHMP2A-202ENST00000596708 DZIP3Q86Y13 1208 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-202ENST00000596708 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
CHMP2A-202ENST00000596708 USP16Q9Y5T5 823 aa14.12□□□□□ -0.15
CHMP2A-202ENST00000596708 CEMIPQ8WUJ3 1361 aa14.11□□□□□ -0.15
CHMP2A-202ENST00000596708 NFKBIEO00221 500 aa14.11□□□□□ -0.15
CHMP2A-202ENST00000596708 PIP4K2AP48426 406 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-202ENST00000596708 ST5P78524 1137 aa14.11□□□□□ -0.15
CHMP2A-202ENST00000596708 DPY19L2Q6NUT2 758 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms