RNA–Protein interactions for RNA: ENST00000596070.1

CLPP-203, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 5

Gene CLPP, Length 1,346 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-203ENST00000596070 USPL1Q5W0Q7 1092 aa21.45■■□□□ 1.02
CLPP-203ENST00000596070 CCDC88AQ3V6T2 1871 aa21.44■■□□□ 1.02
CLPP-203ENST00000596070 ZPR1O75312 459 aa21.44■■□□□ 1.02
CLPP-203ENST00000596070 GAS2L2Q8NHY3 880 aa21.44■■□□□ 1.02
CLPP-203ENST00000596070 GNAT3A8MTJ3 354 aa21.43■■□□□ 1.02
CLPP-203ENST00000596070 FCHSD2O94868 740 aa21.43■■□□□ 1.02
CLPP-203ENST00000596070 PRKAR2BP31323 418 aa21.43■■□□□ 1.02
CLPP-203ENST00000596070 TEFQ10587 303 aa21.43■■□□□ 1.02
CLPP-203ENST00000596070 TTC5Q8N0Z6 440 aa21.43■■□□□ 1.02
CLPP-203ENST00000596070 ANKRD31Q8N7Z5 1873 aa21.43■■□□□ 1.02
CLPP-203ENST00000596070 CFAP53Q96M91 514 aa21.43■■□□□ 1.02
CLPP-203ENST00000596070 CANXP27824 592 aaKnown RBP21.42■■□□□ 1.02
CLPP-203ENST00000596070 IL17REQ8NFR9 667 aa21.42■■□□□ 1.02
CLPP-203ENST00000596070 BCORQ6W2J9 1755 aa21.41■■□□□ 1.02
CLPP-203ENST00000596070 POLRMTO00411 1230 aaKnown RBP21.41■■□□□ 1.02
CLPP-203ENST00000596070 PHACTR3Q96KR7 559 aa21.41■■□□□ 1.02
CLPP-203ENST00000596070 CEP350Q5VT06 3117 aa21.41■■□□□ 1.02
CLPP-203ENST00000596070 PPP2R1AP30153 589 aa21.4■■□□□ 1.02
CLPP-203ENST00000596070 CHRNA5P30532 468 aa21.4■■□□□ 1.02
CLPP-203ENST00000596070 ARHGAP27Q6ZUM4 889 aa21.4■■□□□ 1.02
CLPP-203ENST00000596070 RSPH6AQ9H0K4 717 aa21.4■■□□□ 1.02
CLPP-203ENST00000596070 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
CLPP-203ENST00000596070 ZNF496Q96IT1 587 aaPredicted RBP21.39■■□□□ 1.01
CLPP-203ENST00000596070 NARFQ9UHQ1 456 aa21.39■■□□□ 1.01
CLPP-203ENST00000596070 HEG1Q9ULI3 1381 aa21.39■■□□□ 1.01
CLPP-203ENST00000596070 COL11A2P13942 1736 aaPredicted RBP21.39■■□□□ 1.01
CLPP-203ENST00000596070 KCNA3P22001 575 aa21.38■■□□□ 1.01
CLPP-203ENST00000596070 ZEB1P37275 1124 aaPredicted RBP21.38■■□□□ 1.01
CLPP-203ENST00000596070 ZNF330Q9Y3S2 320 aaPredicted RBP21.38■■□□□ 1.01
CLPP-203ENST00000596070 U2AF1L5P0DN76 240 aaPredicted RBP21.37■■□□□ 1.01
CLPP-203ENST00000596070 TM4SF1P30408 202 aa21.37■■□□□ 1.01
CLPP-203ENST00000596070 U2AF1Q01081 240 aaKnown RBP eCLIP21.37■■□□□ 1.01
CLPP-203ENST00000596070 NFIXQ14938 502 aa21.37■■□□□ 1.01
CLPP-203ENST00000596070 ZNF790Q6PG37 636 aa21.37■■□□□ 1.01
CLPP-203ENST00000596070 BCL2L12Q9HB09 334 aa21.37■■□□□ 1.01
CLPP-203ENST00000596070 PIM2Q9P1W9 311 aa21.36■■□□□ 1.01
CLPP-203ENST00000596070 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
CLPP-203ENST00000596070 STARD3NLO95772 234 aa21.35■■□□□ 1.01
CLPP-203ENST00000596070 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
CLPP-203ENST00000596070 LAMB4A4D0S4 1761 aa21.35■■□□□ 1.01
CLPP-203ENST00000596070 CARMIL3Q8ND23 1372 aa21.34■■□□□ 1.01
CLPP-203ENST00000596070 KCNQ3O43525 872 aa21.34■■□□□ 1.01
CLPP-203ENST00000596070 DALRD3Q5D0E6 543 aaKnown RBP21.34■■□□□ 1.01
CLPP-203ENST00000596070 BICDL1Q6ZP65 573 aa21.34■■□□□ 1.01
CLPP-203ENST00000596070 TIAM2Q8IVF5 1701 aa21.34■■□□□ 1.01
CLPP-203ENST00000596070 BTBD11A6QL63 1104 aa21.32■■□□□ 1
CLPP-203ENST00000596070 EIF5P55010 431 aaKnown RBP21.32■■□□□ 1
CLPP-203ENST00000596070 FMNL2Q96PY5 1086 aa21.32■■□□□ 1
CLPP-203ENST00000596070 KDM3BQ7LBC6 1761 aa21.32■■□□□ 1
CLPP-203ENST00000596070 SERPINB2P05120 415 aa21.31■■□□□ 1
CLPP-203ENST00000596070 MCM10Q7L590 875 aa21.31■■□□□ 1
CLPP-203ENST00000596070 C9orf131Q5VYM1 1079 aa21.3■■□□□ 1
CLPP-203ENST00000596070 TBC1D2BQ9UPU7 963 aa21.3■■□□□ 1
CLPP-203ENST00000596070 A0A087WZG4 1122 aa21.29■■□□□ 1
CLPP-203ENST00000596070 KIF3CO14782 793 aa21.29■■□□□ 1
CLPP-203ENST00000596070 A1BGP04217 495 aa21.29■■□□□ 1
CLPP-203ENST00000596070 PIP4K2AP48426 406 aaPredicted RBP21.29■■□□□ 1
CLPP-203ENST00000596070 DCTN1Q14203 1278 aa21.29■■□□□ 1
CLPP-203ENST00000596070 TNRC6CQ9HCJ0 1690 aaKnown RBP21.29■■□□□ 1
CLPP-203ENST00000596070 TBC1D9BQ66K14 1250 aa21.29■■□□□ 1
CLPP-203ENST00000596070 RTF1Q92541 710 aaKnown RBP21.29■■□□□ 1
CLPP-203ENST00000596070 TEX13AQ9BXU3 409 aaPredicted RBP21.29■■□□□ 1
CLPP-203ENST00000596070 PRAMEF22A3QJZ6 481 aa21.28■■□□□ 1
CLPP-203ENST00000596070 ARFGEF2Q9Y6D5 1785 aa21.28■■□□□ 1
CLPP-203ENST00000596070 DICER1Q9UPY3 1922 aaKnown RBP21.27■■□□□ 1
CLPP-203ENST00000596070 IL6STP40189 918 aaPredicted RBP21.27■□□□□ 0.99
CLPP-203ENST00000596070 RASSF7Q02833 373 aa21.27■□□□□ 0.99
CLPP-203ENST00000596070 C2CD5Q86YS7 1000 aa21.27■□□□□ 0.99
CLPP-203ENST00000596070 CCDC24Q8N4L8 307 aa21.27■□□□□ 0.99
CLPP-203ENST00000596070 NMRK2Q9NPI5 230 aa21.27■□□□□ 0.99
CLPP-203ENST00000596070 RNF181Q9P0P0 153 aa21.27■□□□□ 0.99
CLPP-203ENST00000596070 FER1L6Q2WGJ9 1857 aa21.26■□□□□ 0.99
CLPP-203ENST00000596070 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
CLPP-203ENST00000596070 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
CLPP-203ENST00000596070 SLX4Q8IY92 1834 aa21.24■□□□□ 0.99
CLPP-203ENST00000596070 NUP98P52948 1817 aa21.24■□□□□ 0.99
CLPP-203ENST00000596070 HSPA6P17066 643 aa21.23■□□□□ 0.99
CLPP-203ENST00000596070 CAMTA2O94983 1202 aa21.22■□□□□ 0.99
CLPP-203ENST00000596070 DZIP3Q86Y13 1208 aaKnown RBP21.22■□□□□ 0.99
CLPP-203ENST00000596070 WDR90Q96KV7 1748 aa21.21■□□□□ 0.99
CLPP-203ENST00000596070 H0YIN7 160 aa21.21■□□□□ 0.99
CLPP-203ENST00000596070 PRR5LQ6MZQ0 368 aa21.21■□□□□ 0.99
CLPP-203ENST00000596070 TTLL6Q8N841 843 aa21.21■□□□□ 0.99
CLPP-203ENST00000596070 MIS18AQ9NYP9 233 aa21.21■□□□□ 0.99
CLPP-203ENST00000596070 NPHP1O15259 732 aa21.2■□□□□ 0.98
CLPP-203ENST00000596070 SNRPA1P09661 255 aaKnown RBP21.2■□□□□ 0.98
CLPP-203ENST00000596070 ZNF219Q9P2Y4 722 aaPredicted RBP21.2■□□□□ 0.98
CLPP-203ENST00000596070 NEFMP07197 916 aa21.19■□□□□ 0.98
CLPP-203ENST00000596070 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.98
CLPP-203ENST00000596070 CNBD1Q8NA66 436 aa21.18■□□□□ 0.98
CLPP-203ENST00000596070 SETDB2Q96T68 719 aa21.18■□□□□ 0.98
CLPP-203ENST00000596070 HTATSF1O43719 755 aaKnown RBP21.17■□□□□ 0.98
CLPP-203ENST00000596070 PRELPP51888 382 aa21.17■□□□□ 0.98
CLPP-203ENST00000596070 THUMPD2Q9BTF0 503 aaKnown RBP21.17■□□□□ 0.98
CLPP-203ENST00000596070 TOMM70O94826 608 aa21.16■□□□□ 0.98
CLPP-203ENST00000596070 TAF7Q15545 349 aaPredicted RBP21.16■□□□□ 0.98
CLPP-203ENST00000596070 KDM2BQ8NHM5 1336 aa21.16■□□□□ 0.98
CLPP-203ENST00000596070 NBPF26B4DH59 902 aa21.15■□□□□ 0.98
CLPP-203ENST00000596070 PDE6BP35913 854 aa21.15■□□□□ 0.98
CLPP-203ENST00000596070 NBPF10Q6P3W6 841 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms