RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 TEX13AQ9BXU3 409 aaPredicted RBP22.02■■□□□ 1.12
SYMPK-204ENST00000593959 STARD3NLO95772 234 aa22.01■■□□□ 1.11
SYMPK-204ENST00000593959 KCNA3P22001 575 aa22.01■■□□□ 1.11
SYMPK-204ENST00000593959 ADCY9O60503 1353 aa22■■□□□ 1.11
SYMPK-204ENST00000593959 COL15A1P39059 1388 aa22■■□□□ 1.11
SYMPK-204ENST00000593959 POLRMTO00411 1230 aaKnown RBP22■■□□□ 1.11
SYMPK-204ENST00000593959 HTATSF1O43719 755 aaKnown RBP22■■□□□ 1.11
SYMPK-204ENST00000593959 ZPR1O75312 459 aa22■■□□□ 1.11
SYMPK-204ENST00000593959 EIF5P55010 431 aaKnown RBP22■■□□□ 1.11
SYMPK-204ENST00000593959 USPL1Q5W0Q7 1092 aa22■■□□□ 1.11
SYMPK-204ENST00000593959 A0A0G2JLW4 131 aa21.99■■□□□ 1.11
SYMPK-204ENST00000593959 BCL2L12Q9HB09 334 aa21.99■■□□□ 1.11
SYMPK-204ENST00000593959 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
SYMPK-204ENST00000593959 DPEP1P16444 411 aa21.98■■□□□ 1.11
SYMPK-204ENST00000593959 FMNL2Q96PY5 1086 aa21.97■■□□□ 1.11
SYMPK-204ENST00000593959 BTBD11A6QL63 1104 aa21.96■■□□□ 1.11
SYMPK-204ENST00000593959 KCNQ3O43525 872 aa21.95■■□□□ 1.1
SYMPK-204ENST00000593959 NFIXQ14938 502 aa21.95■■□□□ 1.1
SYMPK-204ENST00000593959 WWC3Q9ULE0 1092 aa21.95■■□□□ 1.1
SYMPK-204ENST00000593959 N4BP2Q86UW6 1770 aaPredicted RBP21.94■■□□□ 1.1
SYMPK-204ENST00000593959 A0A087WZG4 1122 aa21.94■■□□□ 1.1
SYMPK-204ENST00000593959 CANXP27824 592 aaKnown RBP21.94■■□□□ 1.1
SYMPK-204ENST00000593959 IL6STP40189 918 aaPredicted RBP21.94■■□□□ 1.1
SYMPK-204ENST00000593959 PLEKHF1Q96S99 279 aa21.94■■□□□ 1.1
SYMPK-204ENST00000593959 ATP10DQ9P241 1426 aa21.94■■□□□ 1.1
SYMPK-204ENST00000593959 BRCA1P38398 1863 aaKnown RBP21.94■■□□□ 1.1
SYMPK-204ENST00000593959 C1QTNF8P60827 252 aa21.93■■□□□ 1.1
SYMPK-204ENST00000593959 MCM10Q7L590 875 aa21.93■■□□□ 1.1
SYMPK-204ENST00000593959 RTF1Q92541 710 aaKnown RBP21.93■■□□□ 1.1
SYMPK-204ENST00000593959 NRXN2Q9P2S2 1712 aa21.92■■□□□ 1.1
SYMPK-204ENST00000593959 BCS1LQ9Y276 419 aa21.92■■□□□ 1.1
SYMPK-204ENST00000593959 PIM2Q9P1W9 311 aa21.91■■□□□ 1.1
SYMPK-204ENST00000593959 RALBP1Q15311 655 aa21.9■■□□□ 1.1
SYMPK-204ENST00000593959 GIGYF1O75420 1035 aaPredicted RBP21.89■■□□□ 1.09
SYMPK-204ENST00000593959 A1BGP04217 495 aa21.89■■□□□ 1.09
SYMPK-204ENST00000593959 SERPINB2P05120 415 aa21.89■■□□□ 1.09
SYMPK-204ENST00000593959 DCTN1Q14203 1278 aa21.89■■□□□ 1.09
SYMPK-204ENST00000593959 TAF7Q15545 349 aaPredicted RBP21.89■■□□□ 1.09
SYMPK-204ENST00000593959 USP16Q9Y5T5 823 aa21.89■■□□□ 1.09
SYMPK-204ENST00000593959 SNRPA1P09661 255 aaKnown RBP21.88■■□□□ 1.09
SYMPK-204ENST00000593959 CEP350Q5VT06 3117 aa21.87■■□□□ 1.09
SYMPK-204ENST00000593959 CHRNA5P30532 468 aa21.87■■□□□ 1.09
SYMPK-204ENST00000593959 DALRD3Q5D0E6 543 aaKnown RBP21.87■■□□□ 1.09
SYMPK-204ENST00000593959 AFDNP55196 1824 aaKnown RBP21.86■■□□□ 1.09
SYMPK-204ENST00000593959 TBC1D2BQ9UPU7 963 aa21.86■■□□□ 1.09
SYMPK-204ENST00000593959 ARFGEF1Q9Y6D6 1849 aa21.85■■□□□ 1.09
SYMPK-204ENST00000593959 PRAMEF22A3QJZ6 481 aa21.85■■□□□ 1.09
SYMPK-204ENST00000593959 CAMTA2O94983 1202 aa21.85■■□□□ 1.09
SYMPK-204ENST00000593959 NFE2L2Q16236 605 aa21.85■■□□□ 1.09
SYMPK-204ENST00000593959 TBC1D9BQ66K14 1250 aa21.85■■□□□ 1.09
SYMPK-204ENST00000593959 PNNQ9H307 717 aaKnown RBP21.85■■□□□ 1.09
SYMPK-204ENST00000593959 RGL2O15211 777 aa21.84■■□□□ 1.09
SYMPK-204ENST00000593959 ARHGAP27Q6ZUM4 889 aa21.84■■□□□ 1.09
SYMPK-204ENST00000593959 GPBP1L1Q9HC44 474 aaPredicted RBP21.84■■□□□ 1.09
SYMPK-204ENST00000593959 SCN7AQ01118 1682 aa21.84■■□□□ 1.09
SYMPK-204ENST00000593959 NEFMP07197 916 aa21.83■■□□□ 1.09
SYMPK-204ENST00000593959 NBPF26B4DH59 902 aa21.82■■□□□ 1.08
SYMPK-204ENST00000593959 DDX10Q13206 875 aaKnown RBP21.82■■□□□ 1.08
SYMPK-204ENST00000593959 NBPF10Q6P3W6 841 aaKnown RBP21.82■■□□□ 1.08
SYMPK-204ENST00000593959 NBPF15Q8N660 670 aa21.82■■□□□ 1.08
SYMPK-204ENST00000593959 PNISRQ8TF01 805 aaKnown RBP21.82■■□□□ 1.08
SYMPK-204ENST00000593959 CLEC4GQ6UXB4 293 aa21.81■■□□□ 1.08
SYMPK-204ENST00000593959 CARMIL3Q8ND23 1372 aa21.81■■□□□ 1.08
SYMPK-204ENST00000593959 BICDL1Q6ZP65 573 aa21.8■■□□□ 1.08
SYMPK-204ENST00000593959 DZIP3Q86Y13 1208 aaKnown RBP21.8■■□□□ 1.08
SYMPK-204ENST00000593959 BRIP1Q9BX63 1249 aa21.8■■□□□ 1.08
SYMPK-204ENST00000593959 MIS18AQ9NYP9 233 aa21.8■■□□□ 1.08
SYMPK-204ENST00000593959 PDZRN3Q9UPQ7 1066 aa21.8■■□□□ 1.08
SYMPK-204ENST00000593959 DLG5Q8TDM6 1919 aa21.79■■□□□ 1.08
SYMPK-204ENST00000593959 PRR5LQ6MZQ0 368 aa21.79■■□□□ 1.08
SYMPK-204ENST00000593959 NPM2Q86SE8 214 aaKnown RBP21.79■■□□□ 1.08
SYMPK-204ENST00000593959 EIF4A1P60842 406 aaKnown RBP21.78■■□□□ 1.08
SYMPK-204ENST00000593959 ZNF330Q9Y3S2 320 aaPredicted RBP21.78■■□□□ 1.08
SYMPK-204ENST00000593959 MYBBP1AQ9BQG0 1328 aaKnown RBP21.78■■□□□ 1.08
SYMPK-204ENST00000593959 DLEC1Q9Y238 1755 aa21.77■■□□□ 1.08
SYMPK-204ENST00000593959 H0YIN7 160 aa21.77■■□□□ 1.08
SYMPK-204ENST00000593959 KIF3CO14782 793 aa21.77■■□□□ 1.08
SYMPK-204ENST00000593959 PIP4K2AP48426 406 aaPredicted RBP21.77■■□□□ 1.08
SYMPK-204ENST00000593959 TTLL6Q8N841 843 aa21.77■■□□□ 1.08
SYMPK-204ENST00000593959 SETDB2Q96T68 719 aa21.77■■□□□ 1.08
SYMPK-204ENST00000593959 MAPK8IP3Q9UPT6 1336 aa21.77■■□□□ 1.07
SYMPK-204ENST00000593959 BCORQ6W2J9 1755 aa21.76■■□□□ 1.07
SYMPK-204ENST00000593959 KDM3BQ7LBC6 1761 aa21.76■■□□□ 1.07
SYMPK-204ENST00000593959 C9orf131Q5VYM1 1079 aa21.76■■□□□ 1.07
SYMPK-204ENST00000593959 C2CD5Q86YS7 1000 aa21.76■■□□□ 1.07
SYMPK-204ENST00000593959 THUMPD2Q9BTF0 503 aaKnown RBP21.76■■□□□ 1.07
SYMPK-204ENST00000593959 PDE6BP35913 854 aa21.75■■□□□ 1.07
SYMPK-204ENST00000593959 ZNF526Q8TF50 670 aaPredicted RBP21.75■■□□□ 1.07
SYMPK-204ENST00000593959 BABAM1Q9NWV8 329 aa21.74■■□□□ 1.07
SYMPK-204ENST00000593959 ANKRD31Q8N7Z5 1873 aa21.74■■□□□ 1.07
SYMPK-204ENST00000593959 SENP3-EIF4A1A0A087X0R7 540 aa21.73■■□□□ 1.07
SYMPK-204ENST00000593959 CNBD1Q8NA66 436 aa21.73■■□□□ 1.07
SYMPK-204ENST00000593959 ZNF652Q9Y2D9 606 aa21.73■■□□□ 1.07
SYMPK-204ENST00000593959 KLRG2A4D1S0 409 aaPredicted RBP21.72■■□□□ 1.07
SYMPK-204ENST00000593959 TMPOP42166 694 aaKnown RBP21.72■■□□□ 1.07
SYMPK-204ENST00000593959 RIPK4P57078 832 aa21.72■■□□□ 1.07
SYMPK-204ENST00000593959 LAMB4A4D0S4 1761 aa21.71■■□□□ 1.07
SYMPK-204ENST00000593959 PRELPP51888 382 aa21.7■■□□□ 1.06
SYMPK-204ENST00000593959 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
SYMPK-204ENST00000593959 ZC3H4Q9UPT8 1303 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms