RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 HOXB7P09629 217 aa23.74■■□□□ 1.39
GHDC-212ENST00000593209 HDGFL1Q5TGJ6 251 aa23.74■■□□□ 1.39
GHDC-212ENST00000593209 NUCB1Q02818 461 aa23.73■■□□□ 1.39
GHDC-212ENST00000593209 MEIS3Q99687 375 aa23.73■■□□□ 1.39
GHDC-212ENST00000593209 IFNL2Q8IZJ0 200 aa23.73■■□□□ 1.39
GHDC-212ENST00000593209 ANP32AP39687 249 aaKnown RBP23.72■■□□□ 1.39
GHDC-212ENST00000593209 ERICH6Q7L0X2 663 aa23.72■■□□□ 1.39
GHDC-212ENST00000593209 EP400Q96L91 3159 aa23.72■■□□□ 1.39
GHDC-212ENST00000593209 DDB1Q16531 1140 aa23.7■■□□□ 1.39
GHDC-212ENST00000593209 NPM2Q86SE8 214 aaKnown RBP23.7■■□□□ 1.39
GHDC-212ENST00000593209 PCDH11XQ9BZA7 1347 aa23.7■■□□□ 1.39
GHDC-212ENST00000593209 PCDH11YQ9BZA8 1340 aa23.7■■□□□ 1.39
GHDC-212ENST00000593209 CCT4P50991 539 aaKnown RBP23.7■■□□□ 1.38
GHDC-212ENST00000593209 KRT27Q7Z3Y8 459 aa23.7■■□□□ 1.38
GHDC-212ENST00000593209 DDX54Q8TDD1 881 aaKnown RBP23.7■■□□□ 1.38
GHDC-212ENST00000593209 ANKRD44Q8N8A2 993 aa23.69■■□□□ 1.38
GHDC-212ENST00000593209 CDCA7Q9BWT1 371 aaPredicted RBP23.69■■□□□ 1.38
GHDC-212ENST00000593209 FKBP5Q13451 457 aaPredicted RBP23.68■■□□□ 1.38
GHDC-212ENST00000593209 SLC4A10Q6U841 1118 aa23.68■■□□□ 1.38
GHDC-212ENST00000593209 GCC1Q96CN9 775 aa23.68■■□□□ 1.38
GHDC-212ENST00000593209 PHAXQ9H814 394 aaKnown RBP23.68■■□□□ 1.38
GHDC-212ENST00000593209 EXOC5O00471 708 aa23.68■■□□□ 1.38
GHDC-212ENST00000593209 CEP85Q6P2H3 762 aa23.68■■□□□ 1.38
GHDC-212ENST00000593209 CHD1LQ86WJ1 897 aa23.67■■□□□ 1.38
GHDC-212ENST00000593209 IPO9Q96P70 1041 aaKnown RBP23.67■■□□□ 1.38
GHDC-212ENST00000593209 CHPF2Q9P2E5 772 aa23.67■■□□□ 1.38
GHDC-212ENST00000593209 EIF2S2P20042 333 aaKnown RBP23.66■■□□□ 1.38
GHDC-212ENST00000593209 SLC52A2Q9HAB3 445 aa23.66■■□□□ 1.38
GHDC-212ENST00000593209 KAT6BQ8WYB5 2073 aa23.66■■□□□ 1.38
GHDC-212ENST00000593209 GIGYF1O75420 1035 aaPredicted RBP23.66■■□□□ 1.38
GHDC-212ENST00000593209 DCAF5Q96JK2 942 aa23.66■■□□□ 1.38
GHDC-212ENST00000593209 LNPKQ9C0E8 428 aa23.66■■□□□ 1.38
GHDC-212ENST00000593209 TNS2Q63HR2 1409 aa23.65■■□□□ 1.38
GHDC-212ENST00000593209 PRAMEF22A3QJZ6 481 aa23.65■■□□□ 1.38
GHDC-212ENST00000593209 NKX1-1Q15270 411 aaPredicted RBP23.65■■□□□ 1.38
GHDC-212ENST00000593209 PAPPAQ13219 1627 aa23.65■■□□□ 1.38
GHDC-212ENST00000593209 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
GHDC-212ENST00000593209 SEC24BO95487 1268 aa23.64■■□□□ 1.38
GHDC-212ENST00000593209 HSP90AB1P08238 724 aaKnown RBP23.64■■□□□ 1.38
GHDC-212ENST00000593209 MARCH10Q8NA82 808 aaPredicted RBP23.64■■□□□ 1.38
GHDC-212ENST00000593209 UBR2Q8IWV8 1755 aa23.64■■□□□ 1.38
GHDC-212ENST00000593209 TOGARAM1Q9Y4F4 1720 aa23.64■■□□□ 1.37
GHDC-212ENST00000593209 RPAP2Q8IXW5 612 aaPredicted RBP23.63■■□□□ 1.37
GHDC-212ENST00000593209 DCTPP1Q9H773 170 aa23.63■■□□□ 1.37
GHDC-212ENST00000593209 ANXA1P04083 346 aa23.62■■□□□ 1.37
GHDC-212ENST00000593209 SLC39A6Q13433 755 aa23.61■■□□□ 1.37
GHDC-212ENST00000593209 ANKRD45Q5TZF3 282 aa23.61■■□□□ 1.37
GHDC-212ENST00000593209 ADCY9O60503 1353 aa23.61■■□□□ 1.37
GHDC-212ENST00000593209 PROSER3Q2NL68 480 aa23.6■■□□□ 1.37
GHDC-212ENST00000593209 ZNF790Q6PG37 636 aa23.6■■□□□ 1.37
GHDC-212ENST00000593209 NFATC2IPQ8NCF5 419 aa23.6■■□□□ 1.37
GHDC-212ENST00000593209 ITGB4P16144 1822 aa23.58■■□□□ 1.37
GHDC-212ENST00000593209 CHMP4AQ9BY43 222 aa23.56■■□□□ 1.36
GHDC-212ENST00000593209 DBF4Q9UBU7 674 aaPredicted RBP23.56■■□□□ 1.36
GHDC-212ENST00000593209 NOP58Q9Y2X3 529 aaKnown RBP23.56■■□□□ 1.36
GHDC-212ENST00000593209 ERVV-2B6SEH9 535 aa23.56■■□□□ 1.36
GHDC-212ENST00000593209 GNAI2P04899 355 aa23.56■■□□□ 1.36
GHDC-212ENST00000593209 USP44Q9H0E7 712 aa23.56■■□□□ 1.36
GHDC-212ENST00000593209 CABP4P57796 275 aa23.55■■□□□ 1.36
GHDC-212ENST00000593209 PDIA6Q15084 440 aa23.55■■□□□ 1.36
GHDC-212ENST00000593209 TUBGCP6Q96RT7 1819 aa23.54■■□□□ 1.36
GHDC-212ENST00000593209 PI4KAP2A4QPH2 592 aa23.54■■□□□ 1.36
GHDC-212ENST00000593209 GNAI3P08754 354 aa23.54■■□□□ 1.36
GHDC-212ENST00000593209 BEND3Q5T5X7 828 aa23.54■■□□□ 1.36
GHDC-212ENST00000593209 PI4KAP1Q8N8J0 262 aa23.54■■□□□ 1.36
GHDC-212ENST00000593209 ZNF496Q96IT1 587 aaPredicted RBP23.54■■□□□ 1.36
GHDC-212ENST00000593209 FAM196AQ6ZSG2 479 aa23.53■■□□□ 1.36
GHDC-212ENST00000593209 DNAAF4Q8WXU2 420 aa23.53■■□□□ 1.36
GHDC-212ENST00000593209 ACSBG1Q96GR2 724 aa23.53■■□□□ 1.36
GHDC-212ENST00000593209 KCPQ6ZWJ8 1503 aa23.53■■□□□ 1.36
GHDC-212ENST00000593209 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
GHDC-212ENST00000593209 SBF2Q86WG5 1849 aa23.53■■□□□ 1.36
GHDC-212ENST00000593209 TRIM37O94972 964 aa23.51■■□□□ 1.35
GHDC-212ENST00000593209 PTF1AQ7RTS3 328 aa23.51■■□□□ 1.35
GHDC-212ENST00000593209 SRCIN1Q9C0H9 1055 aa23.51■■□□□ 1.35
GHDC-212ENST00000593209 DDX21Q9NR30 783 aaKnown RBP eCLIP23.51■■□□□ 1.35
GHDC-212ENST00000593209 LRRFIP2Q9Y608 721 aaKnown RBP23.51■■□□□ 1.35
GHDC-212ENST00000593209 ARFGEF2Q9Y6D5 1785 aa23.51■■□□□ 1.35
GHDC-212ENST00000593209 PNMA6EA0A0J9YXQ4 647 aa23.49■■□□□ 1.35
GHDC-212ENST00000593209 BMP2KLQ5H9B9 411 aa23.49■■□□□ 1.35
GHDC-212ENST00000593209 ATP8B2P98198 1209 aa23.49■■□□□ 1.35
GHDC-212ENST00000593209 PLEKHM2Q8IWE5 1019 aa23.49■■□□□ 1.35
GHDC-212ENST00000593209 HYPKQ9NX55 129 aa23.49■■□□□ 1.35
GHDC-212ENST00000593209 KCNQ2O43526 872 aa23.48■■□□□ 1.35
GHDC-212ENST00000593209 HMMRO75330 724 aa23.48■■□□□ 1.35
GHDC-212ENST00000593209 ZBTB47Q9UFB7 747 aaPredicted RBP23.48■■□□□ 1.35
GHDC-212ENST00000593209 SMARCA5O60264 1052 aaPredicted RBP23.47■■□□□ 1.35
GHDC-212ENST00000593209 LRP10Q7Z4F1 713 aa23.47■■□□□ 1.35
GHDC-212ENST00000593209 C16orf71Q8IYS4 520 aaPredicted RBP23.47■■□□□ 1.35
GHDC-212ENST00000593209 OTUD7AQ8TE49 926 aaPredicted RBP23.47■■□□□ 1.35
GHDC-212ENST00000593209 PIGBQ92521 554 aa23.47■■□□□ 1.35
GHDC-212ENST00000593209 UPF1Q92900 1129 aaKnown RBP eCLIP23.47■■□□□ 1.352e-6■■■■□ 26.7
GHDC-212ENST00000593209 TMOD3Q9NYL9 352 aa23.47■■□□□ 1.35
GHDC-212ENST00000593209 MAP3K2Q9Y2U5 619 aa23.47■■□□□ 1.35
GHDC-212ENST00000593209 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
GHDC-212ENST00000593209 UBTFL1P0CB47 393 aaPredicted RBP23.47■■□□□ 1.35
GHDC-212ENST00000593209 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
GHDC-212ENST00000593209 KSR2Q6VAB6 950 aa23.47■■□□□ 1.35
GHDC-212ENST00000593209 SYTL4Q96C24 671 aaPredicted RBP23.46■■□□□ 1.35
GHDC-212ENST00000593209 USP16Q9Y5T5 823 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms