RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 SNRPA1P09661 255 aaKnown RBP21.56■■□□□ 1.04
DNMT1-229ENST00000593049 NLGN1Q8N2Q7 840 aa21.56■■□□□ 1.04
DNMT1-229ENST00000593049 KDM3BQ7LBC6 1761 aa21.56■■□□□ 1.04
DNMT1-229ENST00000593049 SOS1Q07889 1333 aaPredicted RBP21.55■■□□□ 1.04
DNMT1-229ENST00000593049 THUMPD2Q9BTF0 503 aaKnown RBP21.55■■□□□ 1.04
DNMT1-229ENST00000593049 FHDC1Q9C0D6 1143 aaPredicted RBP21.55■■□□□ 1.04
DNMT1-229ENST00000593049 NEUROD2Q15784 382 aa21.54■■□□□ 1.04
DNMT1-229ENST00000593049 ZBTB1Q9Y2K1 713 aa21.54■■□□□ 1.04
DNMT1-229ENST00000593049 RRP7AQ9Y3A4 280 aaKnown RBP21.54■■□□□ 1.04
DNMT1-229ENST00000593049 COL15A1P39059 1388 aa21.53■■□□□ 1.04
DNMT1-229ENST00000593049 DCAF8L1A6NGE4 600 aa21.53■■□□□ 1.04
DNMT1-229ENST00000593049 CCDC184Q52MB2 194 aa21.53■■□□□ 1.04
DNMT1-229ENST00000593049 USP42Q9H9J4 1324 aaKnown RBP21.53■■□□□ 1.04
DNMT1-229ENST00000593049 A0A087WZG4 1122 aa21.52■■□□□ 1.04
DNMT1-229ENST00000593049 ZPR1O75312 459 aa21.52■■□□□ 1.04
DNMT1-229ENST00000593049 NPM2Q86SE8 214 aaKnown RBP21.52■■□□□ 1.04
DNMT1-229ENST00000593049 SYT17Q9BSW7 474 aa21.52■■□□□ 1.04
DNMT1-229ENST00000593049 GYS1P13807 737 aa21.51■■□□□ 1.03
DNMT1-229ENST00000593049 CANXP27824 592 aaKnown RBP21.51■■□□□ 1.03
DNMT1-229ENST00000593049 MIS18AQ9NYP9 233 aa21.51■■□□□ 1.03
DNMT1-229ENST00000593049 TSPYL4Q9UJ04 414 aa21.51■■□□□ 1.03
DNMT1-229ENST00000593049 APAF1O14727 1248 aa21.5■■□□□ 1.03
DNMT1-229ENST00000593049 IL6STP40189 918 aaPredicted RBP21.5■■□□□ 1.03
DNMT1-229ENST00000593049 EIF5P55010 431 aaKnown RBP21.5■■□□□ 1.03
DNMT1-229ENST00000593049 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
DNMT1-229ENST00000593049 EIF4A1P60842 406 aaKnown RBP21.49■■□□□ 1.03
DNMT1-229ENST00000593049 CALD1Q05682 793 aaKnown RBP21.49■■□□□ 1.03
DNMT1-229ENST00000593049 NARFQ9UHQ1 456 aa21.49■■□□□ 1.03
DNMT1-229ENST00000593049 USP16Q9Y5T5 823 aa21.49■■□□□ 1.03
DNMT1-229ENST00000593049 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
DNMT1-229ENST00000593049 MMP10P09238 476 aa21.48■■□□□ 1.03
DNMT1-229ENST00000593049 KLHL34Q8N239 644 aa21.48■■□□□ 1.03
DNMT1-229ENST00000593049 CD2APQ9Y5K6 639 aa21.48■■□□□ 1.03
DNMT1-229ENST00000593049 GIGYF1O75420 1035 aaPredicted RBP21.47■■□□□ 1.03
DNMT1-229ENST00000593049 A1BGP04217 495 aa21.47■■□□□ 1.03
DNMT1-229ENST00000593049 USPL1Q5W0Q7 1092 aa21.46■■□□□ 1.03
DNMT1-229ENST00000593049 SRP68Q9UHB9 627 aaKnown RBP21.46■■□□□ 1.03
DNMT1-229ENST00000593049 PARP3Q9Y6F1 533 aa21.46■■□□□ 1.03
DNMT1-229ENST00000593049 PRAMEF22A3QJZ6 481 aa21.44■■□□□ 1.02
DNMT1-229ENST00000593049 CHL1O00533 1208 aa21.44■■□□□ 1.02
DNMT1-229ENST00000593049 FKBP8Q14318 412 aa21.44■■□□□ 1.02
DNMT1-229ENST00000593049 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
DNMT1-229ENST00000593049 CFAP44Q96MT7 982 aa21.43■■□□□ 1.02
DNMT1-229ENST00000593049 ZNF330Q9Y3S2 320 aaPredicted RBP21.43■■□□□ 1.02
DNMT1-229ENST00000593049 LAS1LQ9Y4W2 734 aaKnown RBP21.42■■□□□ 1.02
DNMT1-229ENST00000593049 ERBB4Q15303 1308 aa21.41■■□□□ 1.02
DNMT1-229ENST00000593049 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
DNMT1-229ENST00000593049 TM4SF1P30408 202 aa21.4■■□□□ 1.02
DNMT1-229ENST00000593049 GNAI1P63096 354 aa21.4■■□□□ 1.02
DNMT1-229ENST00000593049 CCDC27Q2M243 656 aa21.4■■□□□ 1.02
DNMT1-229ENST00000593049 DZIP3Q86Y13 1208 aaKnown RBP21.4■■□□□ 1.02
DNMT1-229ENST00000593049 IFT57Q9NWB7 429 aa21.4■■□□□ 1.02
DNMT1-229ENST00000593049 RGL2O15211 777 aa21.39■■□□□ 1.01
DNMT1-229ENST00000593049 TBC1D2BQ9UPU7 963 aa21.39■■□□□ 1.01
DNMT1-229ENST00000593049 KIF13BQ9NQT8 1826 aa21.39■■□□□ 1.01
DNMT1-229ENST00000593049 NBPF26B4DH59 902 aa21.38■■□□□ 1.01
DNMT1-229ENST00000593049 NBPF10Q6P3W6 841 aaKnown RBP21.38■■□□□ 1.01
DNMT1-229ENST00000593049 NBPF15Q8N660 670 aa21.38■■□□□ 1.01
DNMT1-229ENST00000593049 NLGN2Q8NFZ4 835 aa21.38■■□□□ 1.01
DNMT1-229ENST00000593049 HOXB7P09629 217 aa21.37■■□□□ 1.01
DNMT1-229ENST00000593049 ZNF853P0CG23 659 aa21.37■■□□□ 1.01
DNMT1-229ENST00000593049 CLEC4GQ6UXB4 293 aa21.37■■□□□ 1.01
DNMT1-229ENST00000593049 NGEFQ8N5V2 710 aa21.37■■□□□ 1.01
DNMT1-229ENST00000593049 BCL2L12Q9HB09 334 aa21.37■■□□□ 1.01
DNMT1-229ENST00000593049 ZNF652Q9Y2D9 606 aa21.37■■□□□ 1.01
DNMT1-229ENST00000593049 BCORQ6W2J9 1755 aa21.37■■□□□ 1.01
DNMT1-229ENST00000593049 C10orf71Q711Q0 1435 aa21.37■■□□□ 1.01
DNMT1-229ENST00000593049 POLRMTO00411 1230 aaKnown RBP21.36■■□□□ 1.01
DNMT1-229ENST00000593049 CAMTA2O94983 1202 aa21.36■■□□□ 1.01
DNMT1-229ENST00000593049 PIP4K2AP48426 406 aaPredicted RBP21.36■■□□□ 1.01
DNMT1-229ENST00000593049 TGFB2P61812 414 aa21.36■■□□□ 1.01
DNMT1-229ENST00000593049 DDR1Q08345 913 aa21.36■■□□□ 1.01
DNMT1-229ENST00000593049 NFIXQ14938 502 aa21.36■■□□□ 1.01
DNMT1-229ENST00000593049 FAM9BQ8IZU0 186 aa21.36■■□□□ 1.01
DNMT1-229ENST00000593049 GPR162Q16538 588 aa21.35■■□□□ 1.01
DNMT1-229ENST00000593049 MBIPQ9NS73 344 aa21.35■■□□□ 1.01
DNMT1-229ENST00000593049 CCER2I3L3R5 266 aa21.33■■□□□ 1.01
DNMT1-229ENST00000593049 EIF2S2P20042 333 aaKnown RBP21.33■■□□□ 1.01
DNMT1-229ENST00000593049 WWC1Q8IX03 1113 aa21.33■■□□□ 1.01
DNMT1-229ENST00000593049 SETDB2Q96T68 719 aa21.33■■□□□ 1.01
DNMT1-229ENST00000593049 CHMP4AQ9BY43 222 aa21.33■■□□□ 1.01
DNMT1-229ENST00000593049 CARMIL3Q8ND23 1372 aa21.33■■□□□ 1
DNMT1-229ENST00000593049 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
DNMT1-229ENST00000593049 IL16Q14005 1332 aa21.32■■□□□ 1
DNMT1-229ENST00000593049 SERPINB2P05120 415 aa21.32■■□□□ 1
DNMT1-229ENST00000593049 TBC1D9BQ66K14 1250 aa21.32■■□□□ 1
DNMT1-229ENST00000593049 KIF6Q6ZMV9 814 aa21.32■■□□□ 1
DNMT1-229ENST00000593049 AFDNP55196 1824 aaKnown RBP21.32■■□□□ 1
DNMT1-229ENST00000593049 ERVV-1B6SEH8 477 aa21.31■■□□□ 1
DNMT1-229ENST00000593049 MYL6BP14649 208 aa21.31■■□□□ 1
DNMT1-229ENST00000593049 GRIN3BO60391 1043 aa21.3■■□□□ 1
DNMT1-229ENST00000593049 BICDL1Q6ZP65 573 aa21.3■■□□□ 1
DNMT1-229ENST00000593049 PELP1Q8IZL8 1130 aaKnown RBP21.3■■□□□ 1
DNMT1-229ENST00000593049 PXDNLA1KZ92 1463 aa21.3■■□□□ 1
DNMT1-229ENST00000593049 HDGFL1Q5TGJ6 251 aa21.29■■□□□ 1
DNMT1-229ENST00000593049 DUSP27Q5VZP5 1158 aa21.29■■□□□ 1
DNMT1-229ENST00000593049 WDR63Q8IWG1 891 aa21.29■■□□□ 1
DNMT1-229ENST00000593049 MAP3K15Q6ZN16 1313 aa21.29■■□□□ 1
DNMT1-229ENST00000593049 KRT24Q2M2I5 525 aa21.28■■□□□ 1
DNMT1-229ENST00000593049 DDX21Q9NR30 783 aaKnown RBP eCLIP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms