RNA–Protein interactions for RNA: ENST00000592707.5

SAFB-214, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 940 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-214ENST00000592707 BRCA1P38398 1863 aaKnown RBP18.58■□□□□ 0.57
SAFB-214ENST00000592707 COL15A1P39059 1388 aa18.58■□□□□ 0.57
SAFB-214ENST00000592707 POLRMTO00411 1230 aaKnown RBP18.58■□□□□ 0.56
SAFB-214ENST00000592707 C1QTNF8P60827 252 aa18.58■□□□□ 0.56
SAFB-214ENST00000592707 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.56
SAFB-214ENST00000592707 NARFQ9UHQ1 456 aa18.58■□□□□ 0.56
SAFB-214ENST00000592707 HEG1Q9ULI3 1381 aa18.57■□□□□ 0.56
SAFB-214ENST00000592707 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
SAFB-214ENST00000592707 EIF5P55010 431 aaKnown RBP18.56■□□□□ 0.56
SAFB-214ENST00000592707 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.565e-6■□□□□ 10
SAFB-214ENST00000592707 TEFQ10587 303 aa18.56■□□□□ 0.56
SAFB-214ENST00000592707 FCHSD2O94868 740 aa18.55■□□□□ 0.56
SAFB-214ENST00000592707 CANXP27824 592 aaKnown RBP18.55■□□□□ 0.56
SAFB-214ENST00000592707 NFIXQ14938 502 aa18.55■□□□□ 0.56
SAFB-214ENST00000592707 TTC5Q8N0Z6 440 aa18.55■□□□□ 0.56
SAFB-214ENST00000592707 ZPR1O75312 459 aa18.54■□□□□ 0.56
SAFB-214ENST00000592707 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
SAFB-214ENST00000592707 BCS1LQ9Y276 419 aa18.54■□□□□ 0.56
SAFB-214ENST00000592707 CEP350Q5VT06 3117 aa18.54■□□□□ 0.56
SAFB-214ENST00000592707 NRXN2Q9P2S2 1712 aa18.54■□□□□ 0.56
SAFB-214ENST00000592707 CHRNA5P30532 468 aa18.53■□□□□ 0.56
SAFB-214ENST00000592707 MCM10Q7L590 875 aa18.53■□□□□ 0.56
SAFB-214ENST00000592707 AFDNP55196 1824 aaKnown RBP18.52■□□□□ 0.56
SAFB-214ENST00000592707 GIGYF1O75420 1035 aaPredicted RBP18.52■□□□□ 0.56
SAFB-214ENST00000592707 STARD3NLO95772 234 aa18.52■□□□□ 0.56
SAFB-214ENST00000592707 DCTN1Q14203 1278 aa18.52■□□□□ 0.56
SAFB-214ENST00000592707 PRAMEF22A3QJZ6 481 aa18.51■□□□□ 0.55
SAFB-214ENST00000592707 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
SAFB-214ENST00000592707 FMNL2Q96PY5 1086 aa18.51■□□□□ 0.55
SAFB-214ENST00000592707 A1BGP04217 495 aa18.5■□□□□ 0.55
SAFB-214ENST00000592707 PLEKHF1Q96S99 279 aa18.49■□□□□ 0.55
SAFB-214ENST00000592707 TEX13AQ9BXU3 409 aaPredicted RBP18.49■□□□□ 0.55
SAFB-214ENST00000592707 USP16Q9Y5T5 823 aa18.49■□□□□ 0.55
SAFB-214ENST00000592707 CARMIL3Q8ND23 1372 aa18.49■□□□□ 0.55
SAFB-214ENST00000592707 ARFGEF1Q9Y6D6 1849 aa18.49■□□□□ 0.55
SAFB-214ENST00000592707 SCN7AQ01118 1682 aa18.48■□□□□ 0.55
SAFB-214ENST00000592707 SERPINB2P05120 415 aa18.48■□□□□ 0.55
SAFB-214ENST00000592707 IL6STP40189 918 aaPredicted RBP18.48■□□□□ 0.55
SAFB-214ENST00000592707 ARHGAP27Q6ZUM4 889 aa18.48■□□□□ 0.55
SAFB-214ENST00000592707 ZNF526Q8TF50 670 aaPredicted RBP18.48■□□□□ 0.55
SAFB-214ENST00000592707 PIM2Q9P1W9 311 aa18.48■□□□□ 0.55
SAFB-214ENST00000592707 TBC1D9BQ66K14 1250 aa18.47■□□□□ 0.55
SAFB-214ENST00000592707 GPBP1L1Q9HC44 474 aaPredicted RBP18.47■□□□□ 0.55
SAFB-214ENST00000592707 TBC1D2BQ9UPU7 963 aa18.47■□□□□ 0.55
SAFB-214ENST00000592707 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
SAFB-214ENST00000592707 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
SAFB-214ENST00000592707 DALRD3Q5D0E6 543 aaKnown RBP18.46■□□□□ 0.55
SAFB-214ENST00000592707 A0A087WZG4 1122 aa18.45■□□□□ 0.54
SAFB-214ENST00000592707 CAMTA2O94983 1202 aa18.45■□□□□ 0.54
SAFB-214ENST00000592707 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
SAFB-214ENST00000592707 SENP3-EIF4A1A0A087X0R7 540 aa18.44■□□□□ 0.54
SAFB-214ENST00000592707 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
SAFB-214ENST00000592707 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
SAFB-214ENST00000592707 BICDL1Q6ZP65 573 aa18.44■□□□□ 0.54
SAFB-214ENST00000592707 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
SAFB-214ENST00000592707 RTF1Q92541 710 aaKnown RBP18.44■□□□□ 0.54
SAFB-214ENST00000592707 DLG5Q8TDM6 1919 aa18.43■□□□□ 0.54
SAFB-214ENST00000592707 KIF3CO14782 793 aa18.43■□□□□ 0.54
SAFB-214ENST00000592707 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
SAFB-214ENST00000592707 ANKRD31Q8N7Z5 1873 aa18.43■□□□□ 0.54
SAFB-214ENST00000592707 DLEC1Q9Y238 1755 aa18.42■□□□□ 0.54
SAFB-214ENST00000592707 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
SAFB-214ENST00000592707 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
SAFB-214ENST00000592707 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
SAFB-214ENST00000592707 PRELPP51888 382 aa18.41■□□□□ 0.54
SAFB-214ENST00000592707 C9orf131Q5VYM1 1079 aa18.41■□□□□ 0.54
SAFB-214ENST00000592707 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
SAFB-214ENST00000592707 CCDC24Q8N4L8 307 aa18.41■□□□□ 0.54
SAFB-214ENST00000592707 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
SAFB-214ENST00000592707 NFE2L2Q16236 605 aa18.4■□□□□ 0.54
SAFB-214ENST00000592707 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
SAFB-214ENST00000592707 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.53
SAFB-214ENST00000592707 C2CD5Q86YS7 1000 aa18.39■□□□□ 0.53
SAFB-214ENST00000592707 COL11A2P13942 1736 aaPredicted RBP18.38■□□□□ 0.53
SAFB-214ENST00000592707 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
SAFB-214ENST00000592707 SBF1O95248 1867 aa18.37■□□□□ 0.53
SAFB-214ENST00000592707 RALBP1Q15311 655 aa18.37■□□□□ 0.53
SAFB-214ENST00000592707 NMRK2Q9NPI5 230 aa18.37■□□□□ 0.53
SAFB-214ENST00000592707 H0YIN7 160 aa18.36■□□□□ 0.53
SAFB-214ENST00000592707 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
SAFB-214ENST00000592707 RASSF7Q02833 373 aa18.36■□□□□ 0.53
SAFB-214ENST00000592707 TTLL6Q8N841 843 aa18.36■□□□□ 0.53
SAFB-214ENST00000592707 BRIP1Q9BX63 1249 aa18.36■□□□□ 0.53
SAFB-214ENST00000592707 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
SAFB-214ENST00000592707 SETDB2Q96T68 719 aa18.35■□□□□ 0.53
SAFB-214ENST00000592707 NFKBIEO00221 500 aa18.34■□□□□ 0.53
SAFB-214ENST00000592707 CLEC4GQ6UXB4 293 aa18.34■□□□□ 0.53
SAFB-214ENST00000592707 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
SAFB-214ENST00000592707 HLFQ16534 295 aa18.33■□□□□ 0.52
SAFB-214ENST00000592707 CNBD1Q8NA66 436 aa18.33■□□□□ 0.52
SAFB-214ENST00000592707 NEFMP07197 916 aa18.31■□□□□ 0.52
SAFB-214ENST00000592707 PDE6BP35913 854 aa18.31■□□□□ 0.52
SAFB-214ENST00000592707 PNISRQ8TF01 805 aaKnown RBP18.31■□□□□ 0.52
SAFB-214ENST00000592707 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
SAFB-214ENST00000592707 MAPK8IP3Q9UPT6 1336 aa18.3■□□□□ 0.52
SAFB-214ENST00000592707 RGL2O15211 777 aa18.3■□□□□ 0.52
SAFB-214ENST00000592707 SRGNP10124 158 aa18.3■□□□□ 0.52
SAFB-214ENST00000592707 HSPA6P17066 643 aa18.3■□□□□ 0.52
SAFB-214ENST00000592707 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
SAFB-214ENST00000592707 ZNF622Q969S3 477 aaKnown RBP eCLIP18.3■□□□□ 0.526e-9■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms