RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 PNISRQ8TF01 805 aaKnown RBP19.13■□□□□ 0.65
DDX39A-217ENST00000592391 SOS1Q07889 1333 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-217ENST00000592391 GYS1P13807 737 aa19.12■□□□□ 0.65
DDX39A-217ENST00000592391 NLGN1Q8N2Q7 840 aa19.12■□□□□ 0.65
DDX39A-217ENST00000592391 MIS18AQ9NYP9 233 aa19.12■□□□□ 0.65
DDX39A-217ENST00000592391 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
DDX39A-217ENST00000592391 CCDC184Q52MB2 194 aa19.11■□□□□ 0.65
DDX39A-217ENST00000592391 KLHL34Q8N239 644 aa19.11■□□□□ 0.65
DDX39A-217ENST00000592391 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
DDX39A-217ENST00000592391 USP42Q9H9J4 1324 aaKnown RBP19.1■□□□□ 0.65
DDX39A-217ENST00000592391 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
DDX39A-217ENST00000592391 CANXP27824 592 aaKnown RBP19.1■□□□□ 0.65
DDX39A-217ENST00000592391 SRP68Q9UHB9 627 aaKnown RBP19.1■□□□□ 0.65
DDX39A-217ENST00000592391 COL15A1P39059 1388 aa19.09■□□□□ 0.65
DDX39A-217ENST00000592391 MMP10P09238 476 aa19.09■□□□□ 0.65
DDX39A-217ENST00000592391 NEUROD2Q15784 382 aa19.09■□□□□ 0.65
DDX39A-217ENST00000592391 EIF5P55010 431 aaKnown RBP19.08■□□□□ 0.64
DDX39A-217ENST00000592391 USP16Q9Y5T5 823 aa19.08■□□□□ 0.64
DDX39A-217ENST00000592391 KDM3BQ7LBC6 1761 aa19.07■□□□□ 0.64
DDX39A-217ENST00000592391 PRAMEF22A3QJZ6 481 aa19.07■□□□□ 0.64
DDX39A-217ENST00000592391 DCAF8L1A6NGE4 600 aa19.07■□□□□ 0.64
DDX39A-217ENST00000592391 ZPR1O75312 459 aa19.07■□□□□ 0.64
DDX39A-217ENST00000592391 A1BGP04217 495 aa19.07■□□□□ 0.64
DDX39A-217ENST00000592391 NARFQ9UHQ1 456 aa19.07■□□□□ 0.64
DDX39A-217ENST00000592391 TRIM35Q9UPQ4 493 aa19.07■□□□□ 0.64
DDX39A-217ENST00000592391 CD2APQ9Y5K6 639 aa19.07■□□□□ 0.64
DDX39A-217ENST00000592391 IL6STP40189 918 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-217ENST00000592391 FKBP8Q14318 412 aa19.06■□□□□ 0.64
DDX39A-217ENST00000592391 NLGN2Q8NFZ4 835 aa19.06■□□□□ 0.64
DDX39A-217ENST00000592391 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
DDX39A-217ENST00000592391 BABAM1Q9NWV8 329 aa19.06■□□□□ 0.64
DDX39A-217ENST00000592391 A0A087WZG4 1122 aa19.05■□□□□ 0.64
DDX39A-217ENST00000592391 EIF4A1P60842 406 aaKnown RBP19.05■□□□□ 0.64
DDX39A-217ENST00000592391 USPL1Q5W0Q7 1092 aa19.05■□□□□ 0.64
DDX39A-217ENST00000592391 TSPYL4Q9UJ04 414 aa19.05■□□□□ 0.64
DDX39A-217ENST00000592391 APAF1O14727 1248 aa19.04■□□□□ 0.64
DDX39A-217ENST00000592391 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
DDX39A-217ENST00000592391 ZNF330Q9Y3S2 320 aaPredicted RBP19.03■□□□□ 0.64
DDX39A-217ENST00000592391 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
DDX39A-217ENST00000592391 NPM2Q86SE8 214 aaKnown RBP19.02■□□□□ 0.64
DDX39A-217ENST00000592391 BCL2L12Q9HB09 334 aa19.02■□□□□ 0.64
DDX39A-217ENST00000592391 TM4SF1P30408 202 aa19.01■□□□□ 0.63
DDX39A-217ENST00000592391 CHL1O00533 1208 aa19■□□□□ 0.63
DDX39A-217ENST00000592391 PIP4K2AP48426 406 aaPredicted RBP19■□□□□ 0.63
DDX39A-217ENST00000592391 DDR1Q08345 913 aa19■□□□□ 0.63
DDX39A-217ENST00000592391 TBC1D2BQ9UPU7 963 aa19■□□□□ 0.63
DDX39A-217ENST00000592391 LAMB4A4D0S4 1761 aa18.99■□□□□ 0.63
DDX39A-217ENST00000592391 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
DDX39A-217ENST00000592391 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
DDX39A-217ENST00000592391 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
DDX39A-217ENST00000592391 C10orf71Q711Q0 1435 aa18.99■□□□□ 0.63
DDX39A-217ENST00000592391 POLRMTO00411 1230 aaKnown RBP18.98■□□□□ 0.63
DDX39A-217ENST00000592391 NFIXQ14938 502 aa18.98■□□□□ 0.63
DDX39A-217ENST00000592391 GPR162Q16538 588 aa18.98■□□□□ 0.63
DDX39A-217ENST00000592391 LAS1LQ9Y4W2 734 aaKnown RBP18.98■□□□□ 0.63
DDX39A-217ENST00000592391 DZIP3Q86Y13 1208 aaKnown RBP18.97■□□□□ 0.63
DDX39A-217ENST00000592391 SCN7AQ01118 1682 aa18.97■□□□□ 0.63
DDX39A-217ENST00000592391 CAMTA2O94983 1202 aa18.96■□□□□ 0.63
DDX39A-217ENST00000592391 CALD1Q05682 793 aaKnown RBP18.96■□□□□ 0.63
DDX39A-217ENST00000592391 CFAP44Q96MT7 982 aa18.96■□□□□ 0.63
DDX39A-217ENST00000592391 UTRNP46939 3433 aa18.96■□□□□ 0.63
DDX39A-217ENST00000592391 KIF13BQ9NQT8 1826 aa18.95■□□□□ 0.62
DDX39A-217ENST00000592391 TGFB2P61812 414 aa18.95■□□□□ 0.62
DDX39A-217ENST00000592391 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
DDX39A-217ENST00000592391 ZNF853P0CG23 659 aa18.94■□□□□ 0.62
DDX39A-217ENST00000592391 TBC1D9BQ66K14 1250 aa18.94■□□□□ 0.62
DDX39A-217ENST00000592391 ERBB4Q15303 1308 aa18.94■□□□□ 0.62
DDX39A-217ENST00000592391 GOLGB1Q14789 3259 aaKnown RBP18.93■□□□□ 0.62
DDX39A-217ENST00000592391 PXDNLA1KZ92 1463 aa18.93■□□□□ 0.62
DDX39A-217ENST00000592391 YBX3P16989 372 aaKnown RBP eCLIP18.93■□□□□ 0.622e-7■□□□□ 10
DDX39A-217ENST00000592391 CCDC27Q2M243 656 aa18.93■□□□□ 0.62
DDX39A-217ENST00000592391 BICDL1Q6ZP65 573 aa18.93■□□□□ 0.62
DDX39A-217ENST00000592391 IFT57Q9NWB7 429 aa18.93■□□□□ 0.62
DDX39A-217ENST00000592391 BCORQ6W2J9 1755 aa18.92■□□□□ 0.62
DDX39A-217ENST00000592391 RGL2O15211 777 aa18.92■□□□□ 0.62
DDX39A-217ENST00000592391 SERPINB2P05120 415 aa18.92■□□□□ 0.62
DDX39A-217ENST00000592391 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
DDX39A-217ENST00000592391 CLEC4GQ6UXB4 293 aa18.92■□□□□ 0.62
DDX39A-217ENST00000592391 MBIPQ9NS73 344 aa18.92■□□□□ 0.62
DDX39A-217ENST00000592391 MYL6BP14649 208 aa18.91■□□□□ 0.62
DDX39A-217ENST00000592391 EIF2S2P20042 333 aaKnown RBP18.91■□□□□ 0.62
DDX39A-217ENST00000592391 GNAI1P63096 354 aa18.91■□□□□ 0.62
DDX39A-217ENST00000592391 KRT24Q2M2I5 525 aa18.91■□□□□ 0.62
DDX39A-217ENST00000592391 ZNF652Q9Y2D9 606 aa18.91■□□□□ 0.62
DDX39A-217ENST00000592391 CARMIL3Q8ND23 1372 aa18.91■□□□□ 0.62
DDX39A-217ENST00000592391 NRXN2Q9P2S2 1712 aa18.91■□□□□ 0.62
DDX39A-217ENST00000592391 A0A0G2JLW4 131 aa18.9■□□□□ 0.62
DDX39A-217ENST00000592391 GRIN3BO60391 1043 aa18.9■□□□□ 0.62
DDX39A-217ENST00000592391 FAM9BQ8IZU0 186 aa18.9■□□□□ 0.62
DDX39A-217ENST00000592391 SETDB2Q96T68 719 aa18.9■□□□□ 0.62
DDX39A-217ENST00000592391 KIAA1551Q9HCM1 1747 aa18.9■□□□□ 0.62
DDX39A-217ENST00000592391 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.61
DDX39A-217ENST00000592391 HOXB7P09629 217 aa18.89■□□□□ 0.61
DDX39A-217ENST00000592391 DPEP1P16444 411 aa18.89■□□□□ 0.61
DDX39A-217ENST00000592391 PDIA6Q15084 440 aa18.89■□□□□ 0.61
DDX39A-217ENST00000592391 WWC1Q8IX03 1113 aa18.89■□□□□ 0.61
DDX39A-217ENST00000592391 NGEFQ8N5V2 710 aa18.89■□□□□ 0.61
DDX39A-217ENST00000592391 AFDNP55196 1824 aaKnown RBP18.88■□□□□ 0.61
DDX39A-217ENST00000592391 WWC3Q9ULE0 1092 aa18.88■□□□□ 0.61
DDX39A-217ENST00000592391 ERVV-1B6SEH8 477 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms