RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 DDR1Q08345 913 aa25.3■■□□□ 1.64
CCDC43-205ENST00000592333 IL17REQ8NFR9 667 aa25.3■■□□□ 1.64
CCDC43-205ENST00000592333 WWC3Q9ULE0 1092 aa25.3■■□□□ 1.64
CCDC43-205ENST00000592333 BRCA1P38398 1863 aaKnown RBP25.3■■□□□ 1.64
CCDC43-205ENST00000592333 USPL1Q5W0Q7 1092 aa25.29■■□□□ 1.64
CCDC43-205ENST00000592333 ZNF790Q6PG37 636 aa25.29■■□□□ 1.64
CCDC43-205ENST00000592333 CEMIPQ8WUJ3 1361 aa25.29■■□□□ 1.64
CCDC43-205ENST00000592333 FCHSD2O94868 740 aa25.28■■□□□ 1.64
CCDC43-205ENST00000592333 ZBTB1Q9Y2K1 713 aa25.28■■□□□ 1.64
CCDC43-205ENST00000592333 A0A087WZG4 1122 aa25.27■■□□□ 1.64
CCDC43-205ENST00000592333 RSPH6AQ9H0K4 717 aa25.27■■□□□ 1.64
CCDC43-205ENST00000592333 HEG1Q9ULI3 1381 aa25.26■■□□□ 1.63
CCDC43-205ENST00000592333 ARFGEF1Q9Y6D6 1849 aa25.26■■□□□ 1.63
CCDC43-205ENST00000592333 EIF5P55010 431 aaKnown RBP25.25■■□□□ 1.63
CCDC43-205ENST00000592333 DALRD3Q5D0E6 543 aaKnown RBP25.25■■□□□ 1.63
CCDC43-205ENST00000592333 ARHGAP27Q6ZUM4 889 aa25.25■■□□□ 1.63
CCDC43-205ENST00000592333 SIPA1L3O60292 1781 aaPredicted RBP25.25■■□□□ 1.63
CCDC43-205ENST00000592333 PPP2R1AP30153 589 aa25.24■■□□□ 1.63
CCDC43-205ENST00000592333 PRKAR2BP31323 418 aa25.24■■□□□ 1.63
CCDC43-205ENST00000592333 ZNF496Q96IT1 587 aaPredicted RBP25.24■■□□□ 1.63
CCDC43-205ENST00000592333 FMNL2Q96PY5 1086 aa25.24■■□□□ 1.63
CCDC43-205ENST00000592333 CNGB1Q14028 1251 aaPredicted RBP25.23■■□□□ 1.63
CCDC43-205ENST00000592333 NFIXQ14938 502 aa25.23■■□□□ 1.63
CCDC43-205ENST00000592333 NRXN2Q9P2S2 1712 aa25.23■■□□□ 1.63
CCDC43-205ENST00000592333 PHACTR3Q96KR7 559 aa25.22■■□□□ 1.63
CCDC43-205ENST00000592333 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
CCDC43-205ENST00000592333 HTATSF1O43719 755 aaKnown RBP25.21■■□□□ 1.63
CCDC43-205ENST00000592333 CANXP27824 592 aaKnown RBP25.21■■□□□ 1.63
CCDC43-205ENST00000592333 IL6STP40189 918 aaPredicted RBP25.21■■□□□ 1.63
CCDC43-205ENST00000592333 ZNF526Q8TF50 670 aaPredicted RBP25.2■■□□□ 1.62
CCDC43-205ENST00000592333 BTBD11A6QL63 1104 aa25.19■■□□□ 1.62
CCDC43-205ENST00000592333 SERPINB2P05120 415 aa25.19■■□□□ 1.62
CCDC43-205ENST00000592333 U2AF1L5P0DN76 240 aaPredicted RBP25.19■■□□□ 1.62
CCDC43-205ENST00000592333 U2AF1Q01081 240 aaKnown RBP eCLIP25.19■■□□□ 1.62
CCDC43-205ENST00000592333 PDZRN3Q9UPQ7 1066 aa25.19■■□□□ 1.62
CCDC43-205ENST00000592333 RTF1Q92541 710 aaKnown RBP25.18■■□□□ 1.62
CCDC43-205ENST00000592333 KIF3CO14782 793 aa25.17■■□□□ 1.62
CCDC43-205ENST00000592333 CHRNA5P30532 468 aa25.16■■□□□ 1.62
CCDC43-205ENST00000592333 NPM2Q86SE8 214 aaKnown RBP25.16■■□□□ 1.62
CCDC43-205ENST00000592333 AFDNP55196 1824 aaKnown RBP25.16■■□□□ 1.62
CCDC43-205ENST00000592333 HSPA6P17066 643 aa25.15■■□□□ 1.62
CCDC43-205ENST00000592333 ZC3H4Q9UPT8 1303 aaKnown RBP25.13■■□□□ 1.61
CCDC43-205ENST00000592333 C9orf131Q5VYM1 1079 aa25.13■■□□□ 1.61
CCDC43-205ENST00000592333 TOMM70O94826 608 aa25.12■■□□□ 1.61
CCDC43-205ENST00000592333 DLEC1Q9Y238 1755 aa25.11■■□□□ 1.61
CCDC43-205ENST00000592333 SCN7AQ01118 1682 aa25.11■■□□□ 1.61
CCDC43-205ENST00000592333 H0YIN7 160 aa25.11■■□□□ 1.61
CCDC43-205ENST00000592333 RGL2O15211 777 aa25.11■■□□□ 1.61
CCDC43-205ENST00000592333 SNRPA1P09661 255 aaKnown RBP25.11■■□□□ 1.61
CCDC43-205ENST00000592333 TTLL6Q8N841 843 aa25.11■■□□□ 1.61
CCDC43-205ENST00000592333 CARMIL3Q8ND23 1372 aa25.1■■□□□ 1.61
CCDC43-205ENST00000592333 NEFMP07197 916 aa25.1■■□□□ 1.61
CCDC43-205ENST00000592333 BRIP1Q9BX63 1249 aa25.1■■□□□ 1.61
CCDC43-205ENST00000592333 CEP350Q5VT06 3117 aa25.1■■□□□ 1.61
CCDC43-205ENST00000592333 KDM2BQ8NHM5 1336 aa25.1■■□□□ 1.61
CCDC43-205ENST00000592333 A1BGP04217 495 aa25.09■■□□□ 1.61
CCDC43-205ENST00000592333 PDE6BP35913 854 aa25.09■■□□□ 1.61
CCDC43-205ENST00000592333 TBC1D9BQ66K14 1250 aa25.09■■□□□ 1.61
CCDC43-205ENST00000592333 CLEC4GQ6UXB4 293 aa25.09■■□□□ 1.61
CCDC43-205ENST00000592333 C2CD5Q86YS7 1000 aa25.08■■□□□ 1.61
CCDC43-205ENST00000592333 PNNQ9H307 717 aaKnown RBP25.08■■□□□ 1.61
CCDC43-205ENST00000592333 TBC1D2BQ9UPU7 963 aa25.08■■□□□ 1.61
CCDC43-205ENST00000592333 KCNQ3O43525 872 aa25.07■■□□□ 1.6
CCDC43-205ENST00000592333 MCM10Q7L590 875 aa25.07■■□□□ 1.6
CCDC43-205ENST00000592333 SETDB2Q96T68 719 aa25.07■■□□□ 1.6
CCDC43-205ENST00000592333 RNF181Q9P0P0 153 aa25.07■■□□□ 1.6
CCDC43-205ENST00000592333 USP16Q9Y5T5 823 aa25.07■■□□□ 1.6
CCDC43-205ENST00000592333 CAMTA2O94983 1202 aa25.06■■□□□ 1.6
CCDC43-205ENST00000592333 TAF7Q15545 349 aaPredicted RBP25.06■■□□□ 1.6
CCDC43-205ENST00000592333 BICDL1Q6ZP65 573 aa25.06■■□□□ 1.6
CCDC43-205ENST00000592333 ZNF330Q9Y3S2 320 aaPredicted RBP25.06■■□□□ 1.6
CCDC43-205ENST00000592333 SBF1O95248 1867 aa25.05■■□□□ 1.6
CCDC43-205ENST00000592333 DZIP3Q86Y13 1208 aaKnown RBP25.05■■□□□ 1.6
CCDC43-205ENST00000592333 PNISRQ8TF01 805 aaKnown RBP25.05■■□□□ 1.6
CCDC43-205ENST00000592333 PRR5LQ6MZQ0 368 aa25.04■■□□□ 1.6
CCDC43-205ENST00000592333 ZNF652Q9Y2D9 606 aa25.04■■□□□ 1.6
CCDC43-205ENST00000592333 LMNB1P20700 586 aa25.03■■□□□ 1.6
CCDC43-205ENST00000592333 RBM46Q8TBY0 533 aaKnown RBP25.03■■□□□ 1.6
CCDC43-205ENST00000592333 NMRK2Q9NPI5 230 aa25.03■■□□□ 1.6
CCDC43-205ENST00000592333 APLP1P51693 650 aa25.02■■□□□ 1.6
CCDC43-205ENST00000592333 CNBD1Q8NA66 436 aa25.02■■□□□ 1.6
CCDC43-205ENST00000592333 BCORQ6W2J9 1755 aa25.01■■□□□ 1.59
CCDC43-205ENST00000592333 PLEKHF1Q96S99 279 aa25.01■■□□□ 1.59
CCDC43-205ENST00000592333 ST5P78524 1137 aa25■■□□□ 1.59
CCDC43-205ENST00000592333 DCTN1Q14203 1278 aa25■■□□□ 1.59
CCDC43-205ENST00000592333 C16orf71Q8IYS4 520 aaPredicted RBP25■■□□□ 1.59
CCDC43-205ENST00000592333 FSTL1Q12841 308 aa24.99■■□□□ 1.59
CCDC43-205ENST00000592333 ANKRD31Q8N7Z5 1873 aa24.99■■□□□ 1.59
CCDC43-205ENST00000592333 STYK1Q6J9G0 422 aa24.98■■□□□ 1.59
CCDC43-205ENST00000592333 CNKSR1Q969H4 720 aa24.98■■□□□ 1.59
CCDC43-205ENST00000592333 TNRC6CQ9HCJ0 1690 aaKnown RBP24.97■■□□□ 1.59
CCDC43-205ENST00000592333 PRAMEF22A3QJZ6 481 aa24.97■■□□□ 1.59
CCDC43-205ENST00000592333 NPHP1O15259 732 aa24.97■■□□□ 1.59
CCDC43-205ENST00000592333 NFE2L2Q16236 605 aa24.97■■□□□ 1.59
CCDC43-205ENST00000592333 ZNF622Q969S3 477 aaKnown RBP eCLIP24.97■■□□□ 1.59
CCDC43-205ENST00000592333 RASSF7Q02833 373 aa24.96■■□□□ 1.59
CCDC43-205ENST00000592333 RALBP1Q15311 655 aa24.96■■□□□ 1.59
CCDC43-205ENST00000592333 SOGA3Q5TF21 947 aa24.96■■□□□ 1.59
CCDC43-205ENST00000592333 LTBP3Q9NS15 1303 aa24.95■■□□□ 1.58
CCDC43-205ENST00000592333 GLTPD2A6NH11 291 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms