RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 BACH2Q9BYV9 841 aa24.58■■□□□ 1.53
SPHK1-207ENST00000590959 PDE4AP27815 886 aa24.58■■□□□ 1.52
SPHK1-207ENST00000590959 DEKP35659 375 aaKnown RBP24.58■■□□□ 1.52
SPHK1-207ENST00000590959 CHMP4BQ9H444 224 aaKnown RBP24.58■■□□□ 1.52
SPHK1-207ENST00000590959 PTF1AQ7RTS3 328 aa24.56■■□□□ 1.52
SPHK1-207ENST00000590959 DOT1LQ8TEK3 1739 aa24.56■■□□□ 1.52
SPHK1-207ENST00000590959 KCNQ2O43526 872 aa24.55■■□□□ 1.52
SPHK1-207ENST00000590959 PRIM1P49642 420 aaKnown RBP24.55■■□□□ 1.52
SPHK1-207ENST00000590959 CABP4P57796 275 aa24.55■■□□□ 1.52
SPHK1-207ENST00000590959 ZNF790Q6PG37 636 aa24.55■■□□□ 1.52
SPHK1-207ENST00000590959 ERVV-2B6SEH9 535 aa24.55■■□□□ 1.52
SPHK1-207ENST00000590959 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
SPHK1-207ENST00000590959 HEG1Q9ULI3 1381 aa24.55■■□□□ 1.52
SPHK1-207ENST00000590959 ITGB4P16144 1822 aa24.55■■□□□ 1.52
SPHK1-207ENST00000590959 SYTL4Q96C24 671 aaPredicted RBP24.54■■□□□ 1.52
SPHK1-207ENST00000590959 GIGYF1O75420 1035 aaPredicted RBP24.53■■□□□ 1.52
SPHK1-207ENST00000590959 PCDHB15Q9Y5E8 787 aa24.53■■□□□ 1.52
SPHK1-207ENST00000590959 PIGBQ92521 554 aa24.53■■□□□ 1.52
SPHK1-207ENST00000590959 DDRGK1Q96HY6 314 aa24.53■■□□□ 1.52
SPHK1-207ENST00000590959 ZBTB40Q9NUA8 1239 aa24.53■■□□□ 1.52
SPHK1-207ENST00000590959 EIF2S2P20042 333 aaKnown RBP24.52■■□□□ 1.52
SPHK1-207ENST00000590959 SLC39A6Q13433 755 aa24.52■■□□□ 1.52
SPHK1-207ENST00000590959 G2E3Q7L622 706 aa24.52■■□□□ 1.52
SPHK1-207ENST00000590959 FLIIQ13045 1269 aa24.51■■□□□ 1.51
SPHK1-207ENST00000590959 INTS3Q68E01 1043 aaKnown RBP24.51■■□□□ 1.51
SPHK1-207ENST00000590959 ZBTB7BO15156 539 aaPredicted RBP24.51■■□□□ 1.51
SPHK1-207ENST00000590959 TTC5Q8N0Z6 440 aa24.51■■□□□ 1.51
SPHK1-207ENST00000590959 IGHDP01880 384 aa24.49■■□□□ 1.51
SPHK1-207ENST00000590959 TMOD3Q9NYL9 352 aa24.49■■□□□ 1.51
SPHK1-207ENST00000590959 SBF2Q86WG5 1849 aa24.49■■□□□ 1.51
SPHK1-207ENST00000590959 BCL9O00512 1426 aa24.49■■□□□ 1.51
SPHK1-207ENST00000590959 CACNA1FO60840 1977 aa24.49■■□□□ 1.51
SPHK1-207ENST00000590959 FKBP5Q13451 457 aaPredicted RBP24.48■■□□□ 1.51
SPHK1-207ENST00000590959 RWDD1Q9H446 243 aaPredicted RBP24.48■■□□□ 1.51
SPHK1-207ENST00000590959 ASAP1Q9ULH1 1129 aa24.47■■□□□ 1.51
SPHK1-207ENST00000590959 FAM196AQ6ZSG2 479 aa24.47■■□□□ 1.51
SPHK1-207ENST00000590959 CHPF2Q9P2E5 772 aa24.47■■□□□ 1.51
SPHK1-207ENST00000590959 DBF4Q9UBU7 674 aaPredicted RBP24.47■■□□□ 1.51
SPHK1-207ENST00000590959 ZNF496Q96IT1 587 aaPredicted RBP24.45■■□□□ 1.51
SPHK1-207ENST00000590959 FMNL2Q96PY5 1086 aa24.45■■□□□ 1.51
SPHK1-207ENST00000590959 ATG3Q9NT62 314 aa24.45■■□□□ 1.5
SPHK1-207ENST00000590959 CCT4P50991 539 aaKnown RBP24.44■■□□□ 1.5
SPHK1-207ENST00000590959 PRAMEF22A3QJZ6 481 aa24.43■■□□□ 1.5
SPHK1-207ENST00000590959 F6X3S4 739 aa24.43■■□□□ 1.5
SPHK1-207ENST00000590959 TRIM37O94972 964 aa24.43■■□□□ 1.5
SPHK1-207ENST00000590959 NBR1Q14596 966 aa24.43■■□□□ 1.5
SPHK1-207ENST00000590959 SLC4A10Q6U841 1118 aa24.43■■□□□ 1.5
SPHK1-207ENST00000590959 PHAXQ9H814 394 aaKnown RBP24.43■■□□□ 1.5
SPHK1-207ENST00000590959 SNRPA1P09661 255 aaKnown RBP24.43■■□□□ 1.5
SPHK1-207ENST00000590959 HDAC1Q13547 482 aaPredicted RBP24.43■■□□□ 1.5
SPHK1-207ENST00000590959 NHSQ6T4R5 1651 aa24.42■■□□□ 1.5
SPHK1-207ENST00000590959 PAPPAQ13219 1627 aa24.4■■□□□ 1.5
SPHK1-207ENST00000590959 BTAF1O14981 1849 aa24.39■■□□□ 1.5
SPHK1-207ENST00000590959 PTCD1O75127 700 aaKnown RBP24.39■■□□□ 1.5
SPHK1-207ENST00000590959 DDX21Q9NR30 783 aaKnown RBP eCLIP24.39■■□□□ 1.5
SPHK1-207ENST00000590959 HYPKQ9NX55 129 aa24.39■■□□□ 1.5
SPHK1-207ENST00000590959 PXDNLA1KZ92 1463 aa24.39■■□□□ 1.49
SPHK1-207ENST00000590959 BCL11BQ9C0K0 894 aaPredicted RBP24.38■■□□□ 1.49
SPHK1-207ENST00000590959 ANXA1P04083 346 aa24.37■■□□□ 1.49
SPHK1-207ENST00000590959 KCPQ6ZWJ8 1503 aa24.37■■□□□ 1.49
SPHK1-207ENST00000590959 UBR2Q8IWV8 1755 aa24.36■■□□□ 1.49
SPHK1-207ENST00000590959 C5P01031 1676 aa24.36■■□□□ 1.49
SPHK1-207ENST00000590959 PROSER3Q2NL68 480 aa24.36■■□□□ 1.49
SPHK1-207ENST00000590959 SLC4A9Q96Q91 983 aa24.36■■□□□ 1.49
SPHK1-207ENST00000590959 C1orf115Q9H7X2 142 aa24.36■■□□□ 1.49
SPHK1-207ENST00000590959 USP16Q9Y5T5 823 aa24.35■■□□□ 1.49
SPHK1-207ENST00000590959 PDIA6Q15084 440 aa24.34■■□□□ 1.49
SPHK1-207ENST00000590959 NPM2Q86SE8 214 aaKnown RBP24.34■■□□□ 1.49
SPHK1-207ENST00000590959 MEIS3Q99687 375 aa24.34■■□□□ 1.49
SPHK1-207ENST00000590959 RBM42Q9BTD8 480 aaKnown RBP24.34■■□□□ 1.49
SPHK1-207ENST00000590959 PALLDQ8WX93 1383 aa24.33■■□□□ 1.49
SPHK1-207ENST00000590959 PI4KAP2A4QPH2 592 aa24.33■■□□□ 1.49
SPHK1-207ENST00000590959 SKAP1Q86WV1 359 aa24.33■■□□□ 1.49
SPHK1-207ENST00000590959 PI4KAP1Q8N8J0 262 aa24.33■■□□□ 1.49
SPHK1-207ENST00000590959 DNAAF4Q8WXU2 420 aa24.33■■□□□ 1.49
SPHK1-207ENST00000590959 KCNQ4P56696 695 aa24.32■■□□□ 1.48
SPHK1-207ENST00000590959 DDX58O95786 925 aaKnown RBP24.32■■□□□ 1.48
SPHK1-207ENST00000590959 KSR2Q6VAB6 950 aa24.3■■□□□ 1.48
SPHK1-207ENST00000590959 SMC5Q8IY18 1101 aa24.3■■□□□ 1.48
SPHK1-207ENST00000590959 SRCIN1Q9C0H9 1055 aa24.3■■□□□ 1.48
SPHK1-207ENST00000590959 ADCY9O60503 1353 aa24.3■■□□□ 1.48
SPHK1-207ENST00000590959 GNAI3P08754 354 aa24.3■■□□□ 1.48
SPHK1-207ENST00000590959 RPAP2Q8IXW5 612 aaPredicted RBP24.3■■□□□ 1.48
SPHK1-207ENST00000590959 ERBB4Q15303 1308 aa24.3■■□□□ 1.48
SPHK1-207ENST00000590959 N4BP2Q86UW6 1770 aaPredicted RBP24.3■■□□□ 1.48
SPHK1-207ENST00000590959 LOC102724428A0A0B4J2F2 783 aa24.29■■□□□ 1.48
SPHK1-207ENST00000590959 MYL6BP14649 208 aa24.29■■□□□ 1.48
SPHK1-207ENST00000590959 SIK1P57059 783 aa24.29■■□□□ 1.48
SPHK1-207ENST00000590959 FAM161AQ3B820 660 aa24.29■■□□□ 1.48
SPHK1-207ENST00000590959 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
SPHK1-207ENST00000590959 SIRT2Q8IXJ6 389 aa24.28■■□□□ 1.48
SPHK1-207ENST00000590959 SMARCC1Q92922 1105 aaPredicted RBP24.28■■□□□ 1.48
SPHK1-207ENST00000590959 ATP10DQ9P241 1426 aa24.28■■□□□ 1.48
SPHK1-207ENST00000590959 APBA3O96018 575 aa24.28■■□□□ 1.48
SPHK1-207ENST00000590959 RGS3P49796 1198 aa24.28■■□□□ 1.48
SPHK1-207ENST00000590959 BEND3Q5T5X7 828 aa24.28■■□□□ 1.48
SPHK1-207ENST00000590959 ILDR2Q71H61 639 aa24.28■■□□□ 1.48
SPHK1-207ENST00000590959 PDZRN3Q9UPQ7 1066 aa24.28■■□□□ 1.48
SPHK1-207ENST00000590959 MAP3K2Q9Y2U5 619 aa24.28■■□□□ 1.48
SPHK1-207ENST00000590959 TNS1Q9HBL0 1735 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms