RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 NBR1Q14596 966 aa13.66□□□□□ -0.22
SEH1L-208ENST00000590843 TMC4Q7Z404 712 aa13.66□□□□□ -0.22
SEH1L-208ENST00000590843 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
SEH1L-208ENST00000590843 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
SEH1L-208ENST00000590843 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
SEH1L-208ENST00000590843 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
SEH1L-208ENST00000590843 ABT1Q9ULW3 272 aaKnown RBP13.66□□□□□ -0.22
SEH1L-208ENST00000590843 ABCC1P33527 1531 aa13.65□□□□□ -0.22
SEH1L-208ENST00000590843 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
SEH1L-208ENST00000590843 WWC3Q9ULE0 1092 aa13.65□□□□□ -0.22
SEH1L-208ENST00000590843 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
SEH1L-208ENST00000590843 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
SEH1L-208ENST00000590843 CCDC85AQ96PX6 553 aaPredicted RBP13.65□□□□□ -0.22
SEH1L-208ENST00000590843 CARD10Q9BWT7 1032 aa13.65□□□□□ -0.22
SEH1L-208ENST00000590843 ERVV-2B6SEH9 535 aa13.65□□□□□ -0.23
SEH1L-208ENST00000590843 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.23
SEH1L-208ENST00000590843 CSADQ9Y600 493 aa13.65□□□□□ -0.23
SEH1L-208ENST00000590843 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
SEH1L-208ENST00000590843 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
SEH1L-208ENST00000590843 SYAP1Q96A49 352 aaPredicted RBP13.64□□□□□ -0.23
SEH1L-208ENST00000590843 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
SEH1L-208ENST00000590843 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
SEH1L-208ENST00000590843 PRKAG2Q9UGJ0 569 aa13.64□□□□□ -0.23
SEH1L-208ENST00000590843 SEC63Q9UGP8 760 aaKnown RBP13.64□□□□□ -0.23
SEH1L-208ENST00000590843 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 SAMD9Q5K651 1589 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 SLKQ9H2G2 1235 aaPredicted RBP13.63□□□□□ -0.23
SEH1L-208ENST00000590843 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
SEH1L-208ENST00000590843 IQCA1LA6NCM1 817 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 TXLNAP40222 546 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 DNAAF4Q8WXU2 420 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 SPC25Q9HBM1 224 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 PPIP5K2O43314 1243 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 TSR1Q2NL82 804 aaKnown RBP13.63□□□□□ -0.23
SEH1L-208ENST00000590843 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
SEH1L-208ENST00000590843 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
SEH1L-208ENST00000590843 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
SEH1L-208ENST00000590843 CCDC69A6NI79 296 aa13.62□□□□□ -0.23
SEH1L-208ENST00000590843 CCDC96Q2M329 555 aa13.62□□□□□ -0.23
SEH1L-208ENST00000590843 SIL1Q9H173 461 aa13.62□□□□□ -0.23
SEH1L-208ENST00000590843 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
SEH1L-208ENST00000590843 DCAF15Q66K64 600 aa13.62□□□□□ -0.23
SEH1L-208ENST00000590843 CRNKL1Q9BZJ0 848 aaKnown RBP13.61□□□□□ -0.23
SEH1L-208ENST00000590843 PTPRMP28827 1452 aa13.61□□□□□ -0.23
SEH1L-208ENST00000590843 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
SEH1L-208ENST00000590843 HOXC9P31274 260 aa13.61□□□□□ -0.23
SEH1L-208ENST00000590843 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
SEH1L-208ENST00000590843 LPXNO60711 386 aa13.61□□□□□ -0.23
SEH1L-208ENST00000590843 TNPO1Q92973 898 aaKnown RBP13.61□□□□□ -0.23
SEH1L-208ENST00000590843 PLEKHG3A1L390 1219 aa13.61□□□□□ -0.23
SEH1L-208ENST00000590843 BRINP3Q76B58 766 aa13.6□□□□□ -0.23
SEH1L-208ENST00000590843 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
SEH1L-208ENST00000590843 KRT18P05783 430 aaKnown RBP13.6□□□□□ -0.23
SEH1L-208ENST00000590843 ZCCHC11Q5TAX3 1644 aaKnown RBP13.6□□□□□ -0.23
SEH1L-208ENST00000590843 SRGAP3O43295 1099 aa13.6□□□□□ -0.23
SEH1L-208ENST00000590843 ARMC9Q7Z3E5 817 aa13.6□□□□□ -0.23
SEH1L-208ENST00000590843 MPNDQ8N594 471 aa13.6□□□□□ -0.23
SEH1L-208ENST00000590843 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
SEH1L-208ENST00000590843 POLR3AO14802 1390 aaPredicted RBP13.6□□□□□ -0.23
SEH1L-208ENST00000590843 USP48Q86UV5 1035 aa13.6□□□□□ -0.23
SEH1L-208ENST00000590843 GTF3C3Q9Y5Q9 886 aa13.6□□□□□ -0.23
SEH1L-208ENST00000590843 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
SEH1L-208ENST00000590843 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
SEH1L-208ENST00000590843 MCM10Q7L590 875 aa13.59□□□□□ -0.23
SEH1L-208ENST00000590843 DESP17661 470 aa13.59□□□□□ -0.23
SEH1L-208ENST00000590843 PDE4BQ07343 736 aa13.59□□□□□ -0.23
SEH1L-208ENST00000590843 MCTP1Q6DN14 999 aa13.59□□□□□ -0.23
SEH1L-208ENST00000590843 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
SEH1L-208ENST00000590843 SOS1Q07889 1333 aaPredicted RBP13.59□□□□□ -0.23
SEH1L-208ENST00000590843 ARAP3Q8WWN8 1544 aa13.59□□□□□ -0.23
SEH1L-208ENST00000590843 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
SEH1L-208ENST00000590843 MSL1Q68DK7 614 aa13.59□□□□□ -0.23
SEH1L-208ENST00000590843 FAM83GA6ND36 823 aa13.58□□□□□ -0.23
SEH1L-208ENST00000590843 PLCB2Q00722 1185 aa13.58□□□□□ -0.23
SEH1L-208ENST00000590843 PDE3AQ14432 1141 aa13.58□□□□□ -0.23
SEH1L-208ENST00000590843 CCDC93Q567U6 631 aa13.58□□□□□ -0.23
SEH1L-208ENST00000590843 NOD1Q9Y239 953 aa13.58□□□□□ -0.23
SEH1L-208ENST00000590843 PZPP20742 1482 aa13.58□□□□□ -0.23
SEH1L-208ENST00000590843 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
SEH1L-208ENST00000590843 TPM1P09493 284 aa13.58□□□□□ -0.24
SEH1L-208ENST00000590843 TMPOP42166 694 aaKnown RBP13.58□□□□□ -0.24
SEH1L-208ENST00000590843 RTKN2Q8IZC4 609 aa13.58□□□□□ -0.24
SEH1L-208ENST00000590843 SH3TC1Q8TE82 1336 aa13.58□□□□□ -0.24
SEH1L-208ENST00000590843 CDKL5O76039 1030 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 BMS1Q14692 1282 aaKnown RBP13.57□□□□□ -0.24
SEH1L-208ENST00000590843 IQCA1Q86XH1 822 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 AACSQ86V21 672 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 RAB11FIP3O75154 756 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 UFL1O94874 794 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEH1L-208ENST00000590843 MAST1Q9Y2H9 1570 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
SEH1L-208ENST00000590843 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 NFATC2IPQ8NCF5 419 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 AS3MTQ9HBK9 375 aa13.57□□□□□ -0.24
SEH1L-208ENST00000590843 RIMBP2O15034 1052 aa13.56□□□□□ -0.24
SEH1L-208ENST00000590843 C2orf69Q8N8R5 385 aa13.56□□□□□ -0.24
SEH1L-208ENST00000590843 HSP90AB2PQ58FF8 381 aa13.56□□□□□ -0.24
SEH1L-208ENST00000590843 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms