RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 GAS2L2Q8NHY3 880 aa29.28■■■□□ 2.28
DDX39A-215ENST00000590696 NARFQ9UHQ1 456 aa29.28■■■□□ 2.28
DDX39A-215ENST00000590696 GNAT3A8MTJ3 354 aa29.27■■■□□ 2.28
DDX39A-215ENST00000590696 IL17REQ8NFR9 667 aa29.27■■■□□ 2.28
DDX39A-215ENST00000590696 UBR2Q8IWV8 1755 aa29.26■■■□□ 2.28
DDX39A-215ENST00000590696 TEFQ10587 303 aa29.26■■■□□ 2.27
DDX39A-215ENST00000590696 CANXP27824 592 aaKnown RBP29.25■■■□□ 2.27
DDX39A-215ENST00000590696 CHRNA5P30532 468 aa29.25■■■□□ 2.27
DDX39A-215ENST00000590696 DALRD3Q5D0E6 543 aaKnown RBP29.25■■■□□ 2.27
DDX39A-215ENST00000590696 KIF3CO14782 793 aa29.24■■■□□ 2.27
DDX39A-215ENST00000590696 ARFGEF1Q9Y6D6 1849 aa29.23■■■□□ 2.27
DDX39A-215ENST00000590696 NFIXQ14938 502 aa29.23■■■□□ 2.27
DDX39A-215ENST00000590696 CFAP53Q96M91 514 aa29.23■■■□□ 2.27
DDX39A-215ENST00000590696 BCL2L12Q9HB09 334 aa29.23■■■□□ 2.27
DDX39A-215ENST00000590696 STARD3NLO95772 234 aa29.22■■■□□ 2.27
DDX39A-215ENST00000590696 ZNF790Q6PG37 636 aa29.22■■■□□ 2.27
DDX39A-215ENST00000590696 ZNF496Q96IT1 587 aaPredicted RBP29.21■■■□□ 2.27
DDX39A-215ENST00000590696 PRKAR2BP31323 418 aa29.2■■■□□ 2.26
DDX39A-215ENST00000590696 PHACTR3Q96KR7 559 aa29.2■■■□□ 2.26
DDX39A-215ENST00000590696 HEG1Q9ULI3 1381 aa29.19■■■□□ 2.26
DDX39A-215ENST00000590696 RSPH6AQ9H0K4 717 aa29.19■■■□□ 2.26
DDX39A-215ENST00000590696 AFDNP55196 1824 aaKnown RBP29.18■■■□□ 2.26
DDX39A-215ENST00000590696 SERPINB2P05120 415 aa29.18■■■□□ 2.26
DDX39A-215ENST00000590696 HSPA6P17066 643 aa29.18■■■□□ 2.26
DDX39A-215ENST00000590696 EIF5P55010 431 aaKnown RBP29.18■■■□□ 2.26
DDX39A-215ENST00000590696 C9orf131Q5VYM1 1079 aa29.18■■■□□ 2.26
DDX39A-215ENST00000590696 SIPA1L3O60292 1781 aaPredicted RBP29.18■■■□□ 2.26
DDX39A-215ENST00000590696 TEX13AQ9BXU3 409 aaPredicted RBP29.17■■■□□ 2.26
DDX39A-215ENST00000590696 NUDCQ9Y266 331 aa29.17■■■□□ 2.26
DDX39A-215ENST00000590696 CEP350Q5VT06 3117 aa29.17■■■□□ 2.26
DDX39A-215ENST00000590696 A0A087WZG4 1122 aa29.16■■■□□ 2.26
DDX39A-215ENST00000590696 CEMIPQ8WUJ3 1361 aa29.15■■■□□ 2.26
DDX39A-215ENST00000590696 NRXN2Q9P2S2 1712 aa29.15■■■□□ 2.26
DDX39A-215ENST00000590696 PPP2R1AP30153 589 aa29.15■■■□□ 2.26
DDX39A-215ENST00000590696 BICDL1Q6ZP65 573 aa29.14■■■□□ 2.26
DDX39A-215ENST00000590696 FMNL2Q96PY5 1086 aa29.14■■■□□ 2.26
DDX39A-215ENST00000590696 BTBD11A6QL63 1104 aa29.13■■■□□ 2.25
DDX39A-215ENST00000590696 U2AF1L5P0DN76 240 aaPredicted RBP29.12■■■□□ 2.25
DDX39A-215ENST00000590696 U2AF1Q01081 240 aaKnown RBP eCLIP29.12■■■□□ 2.25
DDX39A-215ENST00000590696 NMRK2Q9NPI5 230 aa29.12■■■□□ 2.25
DDX39A-215ENST00000590696 ZNF330Q9Y3S2 320 aaPredicted RBP29.12■■■□□ 2.25
DDX39A-215ENST00000590696 KCNQ3O43525 872 aa29.11■■■□□ 2.25
DDX39A-215ENST00000590696 RNF181Q9P0P0 153 aa29.11■■■□□ 2.25
DDX39A-215ENST00000590696 IL6STP40189 918 aaPredicted RBP29.1■■■□□ 2.25
DDX39A-215ENST00000590696 TBC1D2BQ9UPU7 963 aa29.1■■■□□ 2.25
DDX39A-215ENST00000590696 TOMM70O94826 608 aa29.09■■■□□ 2.25
DDX39A-215ENST00000590696 A1BGP04217 495 aa29.09■■■□□ 2.25
DDX39A-215ENST00000590696 TBC1D9BQ66K14 1250 aa29.09■■■□□ 2.25
DDX39A-215ENST00000590696 C2CD5Q86YS7 1000 aa29.08■■■□□ 2.25
DDX39A-215ENST00000590696 CARMIL3Q8ND23 1372 aa29.08■■■□□ 2.25
DDX39A-215ENST00000590696 RTF1Q92541 710 aaKnown RBP29.07■■■□□ 2.24
DDX39A-215ENST00000590696 H0YIN7 160 aa29.06■■■□□ 2.24
DDX39A-215ENST00000590696 NPM2Q86SE8 214 aaKnown RBP29.06■■■□□ 2.24
DDX39A-215ENST00000590696 TTLL6Q8N841 843 aa29.06■■■□□ 2.24
DDX39A-215ENST00000590696 MCM10Q7L590 875 aa29.05■■■□□ 2.24
DDX39A-215ENST00000590696 SBF1O95248 1867 aa29.05■■■□□ 2.24
DDX39A-215ENST00000590696 DLEC1Q9Y238 1755 aa29.05■■■□□ 2.24
DDX39A-215ENST00000590696 SCN7AQ01118 1682 aa29.05■■■□□ 2.24
DDX39A-215ENST00000590696 RASSF7Q02833 373 aa29.04■■■□□ 2.24
DDX39A-215ENST00000590696 USP16Q9Y5T5 823 aa29.04■■■□□ 2.24
DDX39A-215ENST00000590696 KDM2BQ8NHM5 1336 aa29.03■■■□□ 2.24
DDX39A-215ENST00000590696 PRAMEF22A3QJZ6 481 aa29.01■■■□□ 2.23
DDX39A-215ENST00000590696 CAMTA2O94983 1202 aa29.01■■■□□ 2.23
DDX39A-215ENST00000590696 DCTN1Q14203 1278 aa29.01■■■□□ 2.23
DDX39A-215ENST00000590696 CCDC24Q8N4L8 307 aa29.01■■■□□ 2.23
DDX39A-215ENST00000590696 PIP4K2AP48426 406 aaPredicted RBP29■■■□□ 2.23
DDX39A-215ENST00000590696 PRR5LQ6MZQ0 368 aa29■■■□□ 2.23
DDX39A-215ENST00000590696 DZIP3Q86Y13 1208 aaKnown RBP29■■■□□ 2.23
DDX39A-215ENST00000590696 C16orf71Q8IYS4 520 aaPredicted RBP29■■■□□ 2.23
DDX39A-215ENST00000590696 BRIP1Q9BX63 1249 aa29■■■□□ 2.23
DDX39A-215ENST00000590696 HTATSF1O43719 755 aaKnown RBP28.99■■■□□ 2.23
DDX39A-215ENST00000590696 PDE6BP35913 854 aa28.99■■■□□ 2.23
DDX39A-215ENST00000590696 APLP1P51693 650 aa28.99■■■□□ 2.23
DDX39A-215ENST00000590696 SETDB2Q96T68 719 aa28.99■■■□□ 2.23
DDX39A-215ENST00000590696 ANKRD31Q8N7Z5 1873 aa28.98■■■□□ 2.23
DDX39A-215ENST00000590696 SNRPA1P09661 255 aaKnown RBP28.98■■■□□ 2.23
DDX39A-215ENST00000590696 LMNB1P20700 586 aa28.98■■■□□ 2.23
DDX39A-215ENST00000590696 RBM46Q8TBY0 533 aaKnown RBP28.98■■■□□ 2.23
DDX39A-215ENST00000590696 ZNF622Q969S3 477 aaKnown RBP eCLIP28.98■■■□□ 2.232e-18■□□□□ 10.6
DDX39A-215ENST00000590696 RRAGCQ9HB90 399 aa28.98■■■□□ 2.23
DDX39A-215ENST00000590696 PDZRN3Q9UPQ7 1066 aa28.98■■■□□ 2.23
DDX39A-215ENST00000590696 PRELPP51888 382 aa28.97■■■□□ 2.23
DDX39A-215ENST00000590696 NPHP1O15259 732 aa28.95■■■□□ 2.22
DDX39A-215ENST00000590696 ZC3H4Q9UPT8 1303 aaKnown RBP28.94■■■□□ 2.22
DDX39A-215ENST00000590696 BCORQ6W2J9 1755 aa28.94■■■□□ 2.22
DDX39A-215ENST00000590696 CNBD1Q8NA66 436 aa28.94■■■□□ 2.22
DDX39A-215ENST00000590696 NFKBIEO00221 500 aa28.93■■■□□ 2.22
DDX39A-215ENST00000590696 TAF7Q15545 349 aaPredicted RBP28.93■■■□□ 2.22
DDX39A-215ENST00000590696 ZNF219Q9P2Y4 722 aaPredicted RBP28.93■■■□□ 2.22
DDX39A-215ENST00000590696 TNRC6CQ9HCJ0 1690 aaKnown RBP28.92■■■□□ 2.22
DDX39A-215ENST00000590696 COL11A2P13942 1736 aaPredicted RBP28.91■■■□□ 2.22
DDX39A-215ENST00000590696 C21orf2O43822 256 aa28.91■■■□□ 2.22
DDX39A-215ENST00000590696 NEFMP07197 916 aa28.91■■■□□ 2.22
DDX39A-215ENST00000590696 ST5P78524 1137 aa28.91■■■□□ 2.22
DDX39A-215ENST00000590696 MIS18AQ9NYP9 233 aa28.91■■■□□ 2.22
DDX39A-215ENST00000590696 FSTL1Q12841 308 aa28.9■■■□□ 2.22
DDX39A-215ENST00000590696 CLEC4GQ6UXB4 293 aa28.9■■■□□ 2.22
DDX39A-215ENST00000590696 CCDC88AQ3V6T2 1871 aa28.89■■■□□ 2.22
DDX39A-215ENST00000590696 GLTPD2A6NH11 291 aa28.89■■■□□ 2.22
DDX39A-215ENST00000590696 NBPF26B4DH59 902 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms