RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 SRP68Q9UHB9 627 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-212ENST00000590266 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
SCAMP4-212ENST00000590266 SENP3-EIF4A1A0A087X0R7 540 aa18.44■□□□□ 0.54
SCAMP4-212ENST00000590266 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
SCAMP4-212ENST00000590266 PNISRQ8TF01 805 aaKnown RBP18.44■□□□□ 0.54
SCAMP4-212ENST00000590266 TEX13AQ9BXU3 409 aaPredicted RBP18.44■□□□□ 0.54
SCAMP4-212ENST00000590266 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-212ENST00000590266 TSPYL4Q9UJ04 414 aa18.43■□□□□ 0.54
SCAMP4-212ENST00000590266 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-212ENST00000590266 UBR3Q6ZT12 1888 aa18.43■□□□□ 0.54
SCAMP4-212ENST00000590266 SOS1Q07889 1333 aaPredicted RBP18.43■□□□□ 0.54
SCAMP4-212ENST00000590266 VIRMAQ69YN4 1812 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-212ENST00000590266 APAF1O14727 1248 aa18.42■□□□□ 0.54
SCAMP4-212ENST00000590266 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-212ENST00000590266 PIP4K2AP48426 406 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-212ENST00000590266 GPR162Q16538 588 aa18.42■□□□□ 0.54
SCAMP4-212ENST00000590266 USP16Q9Y5T5 823 aa18.42■□□□□ 0.54
SCAMP4-212ENST00000590266 COL15A1P39059 1388 aa18.42■□□□□ 0.54
SCAMP4-212ENST00000590266 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
SCAMP4-212ENST00000590266 ZPR1O75312 459 aa18.41■□□□□ 0.54
SCAMP4-212ENST00000590266 A1BGP04217 495 aa18.41■□□□□ 0.54
SCAMP4-212ENST00000590266 MMP10P09238 476 aa18.41■□□□□ 0.54
SCAMP4-212ENST00000590266 GYS1P13807 737 aa18.41■□□□□ 0.54
SCAMP4-212ENST00000590266 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
SCAMP4-212ENST00000590266 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-212ENST00000590266 NLGN1Q8N2Q7 840 aa18.4■□□□□ 0.54
SCAMP4-212ENST00000590266 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
SCAMP4-212ENST00000590266 CICQ96RK0 1608 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-212ENST00000590266 USP42Q9H9J4 1324 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-212ENST00000590266 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
SCAMP4-212ENST00000590266 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-212ENST00000590266 FKBP8Q14318 412 aa18.38■□□□□ 0.53
SCAMP4-212ENST00000590266 NLGN2Q8NFZ4 835 aa18.38■□□□□ 0.53
SCAMP4-212ENST00000590266 FAM9BQ8IZU0 186 aa18.36■□□□□ 0.53
SCAMP4-212ENST00000590266 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
SCAMP4-212ENST00000590266 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
SCAMP4-212ENST00000590266 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
SCAMP4-212ENST00000590266 A0A087WZG4 1122 aa18.35■□□□□ 0.53
SCAMP4-212ENST00000590266 IL6STP40189 918 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-212ENST00000590266 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-212ENST00000590266 NARFQ9UHQ1 456 aa18.35■□□□□ 0.53
SCAMP4-212ENST00000590266 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-212ENST00000590266 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
SCAMP4-212ENST00000590266 BICDL1Q6ZP65 573 aa18.33■□□□□ 0.52
SCAMP4-212ENST00000590266 NGEFQ8N5V2 710 aa18.33■□□□□ 0.52
SCAMP4-212ENST00000590266 WWC3Q9ULE0 1092 aa18.33■□□□□ 0.52
SCAMP4-212ENST00000590266 C4AP0C0L4 1744 aa18.32■□□□□ 0.52
SCAMP4-212ENST00000590266 EIF2S2P20042 333 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-212ENST00000590266 DZIP3Q86Y13 1208 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-212ENST00000590266 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
SCAMP4-212ENST00000590266 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
SCAMP4-212ENST00000590266 NBPF26B4DH59 902 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 MYL6BP14649 208 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 DDR1Q08345 913 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 KRT24Q2M2I5 525 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 NBPF10Q6P3W6 841 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 NBPF15Q8N660 670 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 NECTIN2Q92692 538 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 BCL2L12Q9HB09 334 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 COL24A1Q17RW2 1714 aa18.31■□□□□ 0.52
SCAMP4-212ENST00000590266 CHL1O00533 1208 aa18.3■□□□□ 0.52
SCAMP4-212ENST00000590266 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
SCAMP4-212ENST00000590266 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
SCAMP4-212ENST00000590266 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-212ENST00000590266 NFIXQ14938 502 aa18.29■□□□□ 0.52
SCAMP4-212ENST00000590266 ZNF784Q8NCA9 323 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-212ENST00000590266 CFAP44Q96MT7 982 aa18.29■□□□□ 0.52
SCAMP4-212ENST00000590266 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
SCAMP4-212ENST00000590266 CAMTA2O94983 1202 aa18.28■□□□□ 0.52
SCAMP4-212ENST00000590266 TBC1D9BQ66K14 1250 aa18.28■□□□□ 0.52
SCAMP4-212ENST00000590266 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
SCAMP4-212ENST00000590266 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SCAMP4-212ENST00000590266 GNAI1P63096 354 aa18.26■□□□□ 0.51
SCAMP4-212ENST00000590266 IFT57Q9NWB7 429 aa18.26■□□□□ 0.51
SCAMP4-212ENST00000590266 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
SCAMP4-212ENST00000590266 NPHP1O15259 732 aa18.25■□□□□ 0.51
SCAMP4-212ENST00000590266 ANXA1P04083 346 aa18.25■□□□□ 0.51
SCAMP4-212ENST00000590266 SERPINB2P05120 415 aa18.25■□□□□ 0.51
SCAMP4-212ENST00000590266 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
SCAMP4-212ENST00000590266 KIF6Q6ZMV9 814 aa18.24■□□□□ 0.51
SCAMP4-212ENST00000590266 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
SCAMP4-212ENST00000590266 ZNF652Q9Y2D9 606 aa18.24■□□□□ 0.51
SCAMP4-212ENST00000590266 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 TTLL7Q6ZT98 887 aa18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 CCDC24Q8N4L8 307 aa18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 SETDB2Q96T68 719 aa18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 ZBTB3Q9H5J0 574 aa18.23■□□□□ 0.51
SCAMP4-212ENST00000590266 DPEP1P16444 411 aa18.22■□□□□ 0.51
SCAMP4-212ENST00000590266 CCDC27Q2M243 656 aa18.22■□□□□ 0.51
SCAMP4-212ENST00000590266 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
SCAMP4-212ENST00000590266 DUSP27Q5VZP5 1158 aa18.22■□□□□ 0.51
SCAMP4-212ENST00000590266 DIEXFQ68CQ4 756 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-212ENST00000590266 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
SCAMP4-212ENST00000590266 ERBB4Q15303 1308 aa18.22■□□□□ 0.51
SCAMP4-212ENST00000590266 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms