RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 HEG1Q9ULI3 1381 aa22.56■■□□□ 1.2
CROCCP3-203ENST00000589964 KCNA3P22001 575 aa22.56■■□□□ 1.2
CROCCP3-203ENST00000589964 TEFQ10587 303 aa22.56■■□□□ 1.2
CROCCP3-203ENST00000589964 POLRMTO00411 1230 aaKnown RBP22.55■■□□□ 1.2
CROCCP3-203ENST00000589964 PIP4K2AP48426 406 aaPredicted RBP22.55■■□□□ 1.2
CROCCP3-203ENST00000589964 GRIN3BO60391 1043 aa22.54■■□□□ 1.2
CROCCP3-203ENST00000589964 TM4SF1P30408 202 aa22.54■■□□□ 1.2
CROCCP3-203ENST00000589964 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
CROCCP3-203ENST00000589964 BRCA1P38398 1863 aaKnown RBP22.54■■□□□ 1.2
CROCCP3-203ENST00000589964 ADCY9O60503 1353 aa22.53■■□□□ 1.2
CROCCP3-203ENST00000589964 NFIXQ14938 502 aa22.53■■□□□ 1.2
CROCCP3-203ENST00000589964 VSIG10Q8N0Z9 540 aa22.53■■□□□ 1.2
CROCCP3-203ENST00000589964 PARP3Q9Y6F1 533 aa22.53■■□□□ 1.2
CROCCP3-203ENST00000589964 ATP10DQ9P241 1426 aa22.52■■□□□ 1.2
CROCCP3-203ENST00000589964 FCHSD2O94868 740 aa22.52■■□□□ 1.2
CROCCP3-203ENST00000589964 A1BGP04217 495 aa22.52■■□□□ 1.2
CROCCP3-203ENST00000589964 CHRNA5P30532 468 aa22.52■■□□□ 1.2
CROCCP3-203ENST00000589964 TTC5Q8N0Z6 440 aa22.52■■□□□ 1.2
CROCCP3-203ENST00000589964 THUMPD2Q9BTF0 503 aaKnown RBP22.52■■□□□ 1.2
CROCCP3-203ENST00000589964 CARMIL3Q8ND23 1372 aa22.51■■□□□ 1.19
CROCCP3-203ENST00000589964 EIF5P55010 431 aaKnown RBP22.51■■□□□ 1.19
CROCCP3-203ENST00000589964 DDX10Q13206 875 aaKnown RBP22.51■■□□□ 1.19
CROCCP3-203ENST00000589964 PLEKHF1Q96S99 279 aa22.51■■□□□ 1.19
CROCCP3-203ENST00000589964 MIS18AQ9NYP9 233 aa22.51■■□□□ 1.19
CROCCP3-203ENST00000589964 AFDNP55196 1824 aaKnown RBP22.51■■□□□ 1.19
CROCCP3-203ENST00000589964 BTBD11A6QL63 1104 aa22.5■■□□□ 1.19
CROCCP3-203ENST00000589964 NARFQ9UHQ1 456 aa22.5■■□□□ 1.19
CROCCP3-203ENST00000589964 BCS1LQ9Y276 419 aa22.5■■□□□ 1.19
CROCCP3-203ENST00000589964 DLG5Q8TDM6 1919 aa22.49■■□□□ 1.19
CROCCP3-203ENST00000589964 USP16Q9Y5T5 823 aa22.49■■□□□ 1.19
CROCCP3-203ENST00000589964 ZPR1O75312 459 aa22.48■■□□□ 1.19
CROCCP3-203ENST00000589964 ZNF330Q9Y3S2 320 aaPredicted RBP22.48■■□□□ 1.19
CROCCP3-203ENST00000589964 SCN7AQ01118 1682 aa22.48■■□□□ 1.19
CROCCP3-203ENST00000589964 TGFB2P61812 414 aa22.47■■□□□ 1.19
CROCCP3-203ENST00000589964 BICDL1Q6ZP65 573 aa22.47■■□□□ 1.19
CROCCP3-203ENST00000589964 ZNF526Q8TF50 670 aaPredicted RBP22.47■■□□□ 1.19
CROCCP3-203ENST00000589964 FMNL2Q96PY5 1086 aa22.47■■□□□ 1.19
CROCCP3-203ENST00000589964 TBC1D2BQ9UPU7 963 aa22.47■■□□□ 1.19
CROCCP3-203ENST00000589964 NRXN2Q9P2S2 1712 aa22.47■■□□□ 1.19
CROCCP3-203ENST00000589964 CCDC24Q8N4L8 307 aa22.46■■□□□ 1.19
CROCCP3-203ENST00000589964 STARD3NLO95772 234 aa22.45■■□□□ 1.18
CROCCP3-203ENST00000589964 TBC1D9BQ66K14 1250 aa22.45■■□□□ 1.18
CROCCP3-203ENST00000589964 NBPF26B4DH59 902 aa22.43■■□□□ 1.18
CROCCP3-203ENST00000589964 NBPF10Q6P3W6 841 aaKnown RBP22.43■■□□□ 1.18
CROCCP3-203ENST00000589964 NBPF15Q8N660 670 aa22.43■■□□□ 1.18
CROCCP3-203ENST00000589964 CAMTA2O94983 1202 aa22.42■■□□□ 1.18
CROCCP3-203ENST00000589964 SERPINB2P05120 415 aa22.42■■□□□ 1.18
CROCCP3-203ENST00000589964 RTF1Q92541 710 aaKnown RBP22.42■■□□□ 1.18
CROCCP3-203ENST00000589964 ANKRD31Q8N7Z5 1873 aa22.41■■□□□ 1.18
CROCCP3-203ENST00000589964 C1QTNF8P60827 252 aa22.41■■□□□ 1.18
CROCCP3-203ENST00000589964 KDM3BQ7LBC6 1761 aa22.4■■□□□ 1.18
CROCCP3-203ENST00000589964 NFE2L2Q16236 605 aa22.4■■□□□ 1.18
CROCCP3-203ENST00000589964 ARHGAP27Q6ZUM4 889 aa22.4■■□□□ 1.18
CROCCP3-203ENST00000589964 BCORQ6W2J9 1755 aa22.4■■□□□ 1.18
CROCCP3-203ENST00000589964 IL6STP40189 918 aaPredicted RBP22.39■■□□□ 1.17
CROCCP3-203ENST00000589964 ARFGEF1Q9Y6D6 1849 aa22.38■■□□□ 1.17
CROCCP3-203ENST00000589964 COL11A2P13942 1736 aaPredicted RBP22.38■■□□□ 1.17
CROCCP3-203ENST00000589964 HTATSF1O43719 755 aaKnown RBP22.37■■□□□ 1.17
CROCCP3-203ENST00000589964 GIGYF1O75420 1035 aaPredicted RBP22.37■■□□□ 1.17
CROCCP3-203ENST00000589964 PRELPP51888 382 aa22.37■■□□□ 1.17
CROCCP3-203ENST00000589964 TAF7Q15545 349 aaPredicted RBP22.37■■□□□ 1.17
CROCCP3-203ENST00000589964 TEX13AQ9BXU3 409 aaPredicted RBP22.37■■□□□ 1.17
CROCCP3-203ENST00000589964 PIM2Q9P1W9 311 aa22.37■■□□□ 1.17
CROCCP3-203ENST00000589964 SNRPA1P09661 255 aaKnown RBP22.36■■□□□ 1.17
CROCCP3-203ENST00000589964 RRP7AQ9Y3A4 280 aaKnown RBP22.36■■□□□ 1.17
CROCCP3-203ENST00000589964 DLEC1Q9Y238 1755 aa22.35■■□□□ 1.17
CROCCP3-203ENST00000589964 RALBP1Q15311 655 aa22.35■■□□□ 1.17
CROCCP3-203ENST00000589964 DALRD3Q5D0E6 543 aaKnown RBP22.35■■□□□ 1.17
CROCCP3-203ENST00000589964 PRR5LQ6MZQ0 368 aa22.35■■□□□ 1.17
CROCCP3-203ENST00000589964 DZIP3Q86Y13 1208 aaKnown RBP22.35■■□□□ 1.17
CROCCP3-203ENST00000589964 CCDC146Q8IYE0 955 aa22.35■■□□□ 1.17
CROCCP3-203ENST00000589964 A0A087WZG4 1122 aa22.34■■□□□ 1.17
CROCCP3-203ENST00000589964 RASSF7Q02833 373 aa22.34■■□□□ 1.17
CROCCP3-203ENST00000589964 LAMB4A4D0S4 1761 aa22.33■■□□□ 1.17
CROCCP3-203ENST00000589964 C2CD5Q86YS7 1000 aa22.33■■□□□ 1.17
CROCCP3-203ENST00000589964 MYBBP1AQ9BQG0 1328 aaKnown RBP22.32■■□□□ 1.16
CROCCP3-203ENST00000589964 EIF4A1P60842 406 aaKnown RBP22.32■■□□□ 1.16
CROCCP3-203ENST00000589964 C9orf131Q5VYM1 1079 aa22.32■■□□□ 1.16
CROCCP3-203ENST00000589964 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
CROCCP3-203ENST00000589964 HLFQ16534 295 aa22.31■■□□□ 1.16
CROCCP3-203ENST00000589964 SENP3-EIF4A1A0A087X0R7 540 aa22.3■■□□□ 1.16
CROCCP3-203ENST00000589964 KIF3CO14782 793 aa22.3■■□□□ 1.16
CROCCP3-203ENST00000589964 MAPK8IP3Q9UPT6 1336 aa22.3■■□□□ 1.16
CROCCP3-203ENST00000589964 TMPOP42166 694 aaKnown RBP22.29■■□□□ 1.16
CROCCP3-203ENST00000589964 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
CROCCP3-203ENST00000589964 NMRK2Q9NPI5 230 aa22.28■■□□□ 1.16
CROCCP3-203ENST00000589964 ZNF219Q9P2Y4 722 aaPredicted RBP22.28■■□□□ 1.16
CROCCP3-203ENST00000589964 SBF1O95248 1867 aa22.27■■□□□ 1.16
CROCCP3-203ENST00000589964 RIPK4P57078 832 aa22.27■■□□□ 1.16
CROCCP3-203ENST00000589964 KRT24Q2M2I5 525 aa22.27■■□□□ 1.16
CROCCP3-203ENST00000589964 TTLL7Q6ZT98 887 aa22.27■■□□□ 1.16
CROCCP3-203ENST00000589964 NFKBIEO00221 500 aa22.26■■□□□ 1.15
CROCCP3-203ENST00000589964 RNF181Q9P0P0 153 aa22.26■■□□□ 1.15
CROCCP3-203ENST00000589964 CEP350Q5VT06 3117 aa22.25■■□□□ 1.15
CROCCP3-203ENST00000589964 FAM177BA6PVY3 158 aa22.25■■□□□ 1.15
CROCCP3-203ENST00000589964 NEUROD2Q15784 382 aa22.25■■□□□ 1.15
CROCCP3-203ENST00000589964 PROSER3Q2NL68 480 aa22.25■■□□□ 1.15
CROCCP3-203ENST00000589964 SLC51AQ86UW1 340 aa22.25■■□□□ 1.15
CROCCP3-203ENST00000589964 CNBD1Q8NA66 436 aa22.25■■□□□ 1.15
CROCCP3-203ENST00000589964 SETDB2Q96T68 719 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms