RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 NARFQ9UHQ1 456 aa21.92■■□□□ 1.1
MBD3-206ENST00000589901 GNAT3A8MTJ3 354 aa21.91■■□□□ 1.1
MBD3-206ENST00000589901 KIF3CO14782 793 aa21.91■■□□□ 1.1
MBD3-206ENST00000589901 CANXP27824 592 aaKnown RBP21.91■■□□□ 1.1
MBD3-206ENST00000589901 NFIXQ14938 502 aa21.91■■□□□ 1.1
MBD3-206ENST00000589901 TTC5Q8N0Z6 440 aa21.91■■□□□ 1.1
MBD3-206ENST00000589901 GAS2L2Q8NHY3 880 aa21.91■■□□□ 1.1
MBD3-206ENST00000589901 TEFQ10587 303 aa21.9■■□□□ 1.1
MBD3-206ENST00000589901 DALRD3Q5D0E6 543 aaKnown RBP21.9■■□□□ 1.1
MBD3-206ENST00000589901 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
MBD3-206ENST00000589901 ZNF496Q96IT1 587 aaPredicted RBP21.89■■□□□ 1.09
MBD3-206ENST00000589901 PHACTR3Q96KR7 559 aa21.89■■□□□ 1.09
MBD3-206ENST00000589901 ZNF790Q6PG37 636 aa21.88■■□□□ 1.09
MBD3-206ENST00000589901 BRCA1P38398 1863 aaKnown RBP21.88■■□□□ 1.09
MBD3-206ENST00000589901 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
MBD3-206ENST00000589901 STARD3NLO95772 234 aa21.87■■□□□ 1.09
MBD3-206ENST00000589901 PRKAR2BP31323 418 aa21.87■■□□□ 1.09
MBD3-206ENST00000589901 C9orf131Q5VYM1 1079 aa21.87■■□□□ 1.09
MBD3-206ENST00000589901 HSPA6P17066 643 aa21.86■■□□□ 1.09
MBD3-206ENST00000589901 EIF5P55010 431 aaKnown RBP21.86■■□□□ 1.09
MBD3-206ENST00000589901 CFAP53Q96M91 514 aa21.86■■□□□ 1.09
MBD3-206ENST00000589901 RSPH6AQ9H0K4 717 aa21.86■■□□□ 1.09
MBD3-206ENST00000589901 UBR2Q8IWV8 1755 aa21.86■■□□□ 1.09
MBD3-206ENST00000589901 HEG1Q9ULI3 1381 aa21.86■■□□□ 1.09
MBD3-206ENST00000589901 SERPINB2P05120 415 aa21.85■■□□□ 1.09
MBD3-206ENST00000589901 CEMIPQ8WUJ3 1361 aa21.84■■□□□ 1.09
MBD3-206ENST00000589901 KCNQ3O43525 872 aa21.83■■□□□ 1.09
MBD3-206ENST00000589901 PPP2R1AP30153 589 aa21.83■■□□□ 1.09
MBD3-206ENST00000589901 BICDL1Q6ZP65 573 aa21.83■■□□□ 1.09
MBD3-206ENST00000589901 NMRK2Q9NPI5 230 aa21.83■■□□□ 1.09
MBD3-206ENST00000589901 TEX13AQ9BXU3 409 aaPredicted RBP21.82■■□□□ 1.08
MBD3-206ENST00000589901 ZNF330Q9Y3S2 320 aaPredicted RBP21.82■■□□□ 1.08
MBD3-206ENST00000589901 A0A087WZG4 1122 aa21.81■■□□□ 1.08
MBD3-206ENST00000589901 U2AF1L5P0DN76 240 aaPredicted RBP21.81■■□□□ 1.08
MBD3-206ENST00000589901 U2AF1Q01081 240 aaKnown RBP eCLIP21.81■■□□□ 1.08
MBD3-206ENST00000589901 FMNL2Q96PY5 1086 aa21.81■■□□□ 1.08
MBD3-206ENST00000589901 RNF181Q9P0P0 153 aa21.81■■□□□ 1.08
MBD3-206ENST00000589901 TBC1D2BQ9UPU7 963 aa21.81■■□□□ 1.08
MBD3-206ENST00000589901 NUDCQ9Y266 331 aa21.81■■□□□ 1.08
MBD3-206ENST00000589901 ARFGEF1Q9Y6D6 1849 aa21.8■■□□□ 1.08
MBD3-206ENST00000589901 CARMIL3Q8ND23 1372 aa21.8■■□□□ 1.08
MBD3-206ENST00000589901 BTBD11A6QL63 1104 aa21.8■■□□□ 1.08
MBD3-206ENST00000589901 TBC1D9BQ66K14 1250 aa21.8■■□□□ 1.08
MBD3-206ENST00000589901 TOMM70O94826 608 aa21.79■■□□□ 1.08
MBD3-206ENST00000589901 A1BGP04217 495 aa21.79■■□□□ 1.08
MBD3-206ENST00000589901 AFDNP55196 1824 aaKnown RBP21.78■■□□□ 1.08
MBD3-206ENST00000589901 NRXN2Q9P2S2 1712 aa21.78■■□□□ 1.08
MBD3-206ENST00000589901 IL6STP40189 918 aaPredicted RBP21.78■■□□□ 1.08
MBD3-206ENST00000589901 C2CD5Q86YS7 1000 aa21.78■■□□□ 1.08
MBD3-206ENST00000589901 SIPA1L3O60292 1781 aaPredicted RBP21.78■■□□□ 1.08
MBD3-206ENST00000589901 RASSF7Q02833 373 aa21.77■■□□□ 1.08
MBD3-206ENST00000589901 MCM10Q7L590 875 aa21.77■■□□□ 1.08
MBD3-206ENST00000589901 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
MBD3-206ENST00000589901 TTLL6Q8N841 843 aa21.76■■□□□ 1.07
MBD3-206ENST00000589901 PRAMEF22A3QJZ6 481 aa21.75■■□□□ 1.07
MBD3-206ENST00000589901 H0YIN7 160 aa21.75■■□□□ 1.07
MBD3-206ENST00000589901 RTF1Q92541 710 aaKnown RBP21.75■■□□□ 1.07
MBD3-206ENST00000589901 USP16Q9Y5T5 823 aa21.75■■□□□ 1.07
MBD3-206ENST00000589901 PIP4K2AP48426 406 aaPredicted RBP21.74■■□□□ 1.07
MBD3-206ENST00000589901 DCTN1Q14203 1278 aa21.74■■□□□ 1.07
MBD3-206ENST00000589901 CAMTA2O94983 1202 aa21.73■■□□□ 1.07
MBD3-206ENST00000589901 PRELPP51888 382 aa21.73■■□□□ 1.07
MBD3-206ENST00000589901 PRR5LQ6MZQ0 368 aa21.73■■□□□ 1.07
MBD3-206ENST00000589901 NPM2Q86SE8 214 aaKnown RBP21.73■■□□□ 1.07
MBD3-206ENST00000589901 KDM2BQ8NHM5 1336 aa21.73■■□□□ 1.07
MBD3-206ENST00000589901 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
MBD3-206ENST00000589901 BRIP1Q9BX63 1249 aa21.71■■□□□ 1.07
MBD3-206ENST00000589901 RRAGCQ9HB90 399 aa21.71■■□□□ 1.07
MBD3-206ENST00000589901 SCN7AQ01118 1682 aa21.71■■□□□ 1.07
MBD3-206ENST00000589901 SNRPA1P09661 255 aaKnown RBP21.7■■□□□ 1.06
MBD3-206ENST00000589901 LMNB1P20700 586 aa21.7■■□□□ 1.06
MBD3-206ENST00000589901 APLP1P51693 650 aa21.7■■□□□ 1.06
MBD3-206ENST00000589901 C16orf71Q8IYS4 520 aaPredicted RBP21.7■■□□□ 1.06
MBD3-206ENST00000589901 RBM46Q8TBY0 533 aaKnown RBP21.7■■□□□ 1.06
MBD3-206ENST00000589901 ZNF622Q969S3 477 aaKnown RBP eCLIP21.7■■□□□ 1.06
MBD3-206ENST00000589901 SETDB2Q96T68 719 aa21.7■■□□□ 1.06
MBD3-206ENST00000589901 NFKBIEO00221 500 aa21.69■■□□□ 1.06
MBD3-206ENST00000589901 PDE6BP35913 854 aa21.69■■□□□ 1.06
MBD3-206ENST00000589901 HTATSF1O43719 755 aaKnown RBP21.68■■□□□ 1.06
MBD3-206ENST00000589901 CNBD1Q8NA66 436 aa21.68■■□□□ 1.06
MBD3-206ENST00000589901 DLEC1Q9Y238 1755 aa21.68■■□□□ 1.06
MBD3-206ENST00000589901 MIS18AQ9NYP9 233 aa21.67■■□□□ 1.06
MBD3-206ENST00000589901 ZNF219Q9P2Y4 722 aaPredicted RBP21.67■■□□□ 1.06
MBD3-206ENST00000589901 SBF1O95248 1867 aa21.66■■□□□ 1.06
MBD3-206ENST00000589901 ZC3H4Q9UPT8 1303 aaKnown RBP21.66■■□□□ 1.06
MBD3-206ENST00000589901 NPHP1O15259 732 aa21.66■■□□□ 1.06
MBD3-206ENST00000589901 C21orf2O43822 256 aa21.66■■□□□ 1.06
MBD3-206ENST00000589901 PDZRN3Q9UPQ7 1066 aa21.66■■□□□ 1.06
MBD3-206ENST00000589901 ANKRD31Q8N7Z5 1873 aa21.65■■□□□ 1.06
MBD3-206ENST00000589901 NBPF26B4DH59 902 aa21.65■■□□□ 1.06
MBD3-206ENST00000589901 TAF7Q15545 349 aaPredicted RBP21.65■■□□□ 1.06
MBD3-206ENST00000589901 NBPF10Q6P3W6 841 aaKnown RBP21.65■■□□□ 1.06
MBD3-206ENST00000589901 NBPF15Q8N660 670 aa21.65■■□□□ 1.06
MBD3-206ENST00000589901 ST5P78524 1137 aa21.64■■□□□ 1.05
MBD3-206ENST00000589901 DNAJC5GQ8N7S2 189 aa21.64■■□□□ 1.05
MBD3-206ENST00000589901 GLTPD2A6NH11 291 aa21.63■■□□□ 1.05
MBD3-206ENST00000589901 FSTL1Q12841 308 aa21.63■■□□□ 1.05
MBD3-206ENST00000589901 CLEC4GQ6UXB4 293 aa21.63■■□□□ 1.05
MBD3-206ENST00000589901 SRGNP10124 158 aa21.62■■□□□ 1.05
MBD3-206ENST00000589901 HTRA3P83110 453 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms