RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CADPS2Q86UW7 1296 aa23.49■■□□□ 1.35
PRKCSH-209ENST00000589838 GBP4Q96PP9 640 aa23.49■■□□□ 1.35
PRKCSH-209ENST00000589838 ABCC6O95255 1503 aa23.49■■□□□ 1.35
PRKCSH-209ENST00000589838 NPHP3Q7Z494 1330 aa23.48■■□□□ 1.35
PRKCSH-209ENST00000589838 ST18O60284 1047 aa23.48■■□□□ 1.35
PRKCSH-209ENST00000589838 SURF6O75683 361 aaKnown RBP23.48■■□□□ 1.35
PRKCSH-209ENST00000589838 TATP17735 454 aaPredicted RBP23.48■■□□□ 1.35
PRKCSH-209ENST00000589838 RAB3GAP1Q15042 981 aa23.48■■□□□ 1.35
PRKCSH-209ENST00000589838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.48■■□□□ 1.35
PRKCSH-209ENST00000589838 SPG7Q9UQ90 795 aa23.48■■□□□ 1.35
PRKCSH-209ENST00000589838 ADCY9O60503 1353 aa23.48■■□□□ 1.35
PRKCSH-209ENST00000589838 KSR2Q6VAB6 950 aa23.47■■□□□ 1.35
PRKCSH-209ENST00000589838 SRGAP3O43295 1099 aa23.47■■□□□ 1.35
PRKCSH-209ENST00000589838 KIF1BPQ96EK5 621 aa23.47■■□□□ 1.35
PRKCSH-209ENST00000589838 DDX58O95786 925 aaKnown RBP23.46■■□□□ 1.35
PRKCSH-209ENST00000589838 NLRP2Q9NX02 1062 aa23.46■■□□□ 1.35
PRKCSH-209ENST00000589838 SCN11AQ9UI33 1791 aa23.46■■□□□ 1.35
PRKCSH-209ENST00000589838 TRIM6-TRIM34B2RNG4 842 aa23.45■■□□□ 1.35
PRKCSH-209ENST00000589838 MCCP23508 829 aa23.45■■□□□ 1.35
PRKCSH-209ENST00000589838 ESYT1Q9BSJ8 1104 aa23.45■■□□□ 1.35
PRKCSH-209ENST00000589838 NBPF7P0C2Y1 421 aaPredicted RBP23.45■■□□□ 1.34
PRKCSH-209ENST00000589838 RHPN1Q8TCX5 695 aa23.45■■□□□ 1.34
PRKCSH-209ENST00000589838 STRCP1A6NGW2 1772 aa23.44■■□□□ 1.34
PRKCSH-209ENST00000589838 COL18A1P39060 1754 aa23.44■■□□□ 1.34
PRKCSH-209ENST00000589838 TNPO1Q92973 898 aaKnown RBP23.44■■□□□ 1.34
PRKCSH-209ENST00000589838 MAP3K2Q9Y2U5 619 aa23.44■■□□□ 1.34
PRKCSH-209ENST00000589838 EPB41L2O43491 1005 aaKnown RBP23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 ANXA1P04083 346 aa23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 MTX1Q13505 466 aa23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 L1TD1Q5T7N2 865 aaKnown RBP23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 RILPL2Q969X0 211 aa23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 DDX21Q9NR30 783 aaKnown RBP eCLIP23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 TRAK2O60296 914 aa23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 CHMLP26374 656 aa23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 C9orf78Q9NZ63 289 aaPredicted RBP23.43■■□□□ 1.34
PRKCSH-209ENST00000589838 TNS3Q68CZ2 1445 aa23.42■■□□□ 1.34
PRKCSH-209ENST00000589838 CRYBG1Q9Y4K1 1723 aa23.42■■□□□ 1.34
PRKCSH-209ENST00000589838 SLC52A2Q9HAB3 445 aa23.42■■□□□ 1.34
PRKCSH-209ENST00000589838 TSHZ3Q63HK5 1081 aa23.41■■□□□ 1.34
PRKCSH-209ENST00000589838 IFNL2Q8IZJ0 200 aa23.41■■□□□ 1.34
PRKCSH-209ENST00000589838 IL27Q8NEV9 243 aa23.41■■□□□ 1.34
PRKCSH-209ENST00000589838 CWC22Q9HCG8 908 aaKnown RBP23.41■■□□□ 1.34
PRKCSH-209ENST00000589838 IL1RAPL2Q9NP60 686 aa23.41■■□□□ 1.34
PRKCSH-209ENST00000589838 CSB-PGBD3P0DP91 1061 aa23.41■■□□□ 1.34
PRKCSH-209ENST00000589838 PHKG2P15735 406 aa23.4■■□□□ 1.34
PRKCSH-209ENST00000589838 ANAPC15P60006 121 aa23.4■■□□□ 1.34
PRKCSH-209ENST00000589838 ZNF790Q6PG37 636 aa23.4■■□□□ 1.34
PRKCSH-209ENST00000589838 LINS1Q8NG48 757 aa23.4■■□□□ 1.34
PRKCSH-209ENST00000589838 AK9Q5TCS8 1911 aa23.4■■□□□ 1.34
PRKCSH-209ENST00000589838 SKOR2Q2VWA4 1001 aaPredicted RBP23.39■■□□□ 1.34
PRKCSH-209ENST00000589838 FOXD4L1Q9NU39 408 aa23.39■■□□□ 1.34
PRKCSH-209ENST00000589838 MCM2P49736 904 aa23.39■■□□□ 1.33
PRKCSH-209ENST00000589838 NUCB2P80303 420 aa23.39■■□□□ 1.33
PRKCSH-209ENST00000589838 ERC1Q8IUD2 1116 aa23.39■■□□□ 1.33
PRKCSH-209ENST00000589838 PROSER3Q2NL68 480 aa23.38■■□□□ 1.33
PRKCSH-209ENST00000589838 NUTM1Q86Y26 1132 aa23.38■■□□□ 1.33
PRKCSH-209ENST00000589838 SPATA31A3Q5VYP0 1347 aa23.37■■□□□ 1.33
PRKCSH-209ENST00000589838 OS9Q13438 667 aaPredicted RBP23.37■■□□□ 1.33
PRKCSH-209ENST00000589838 CLEC17AQ6ZS10 378 aa23.37■■□□□ 1.33
PRKCSH-209ENST00000589838 GOLGA6L22H0YM25 854 aa23.36■■□□□ 1.33
PRKCSH-209ENST00000589838 DCAF5Q96JK2 942 aa23.36■■□□□ 1.33
PRKCSH-209ENST00000589838 KDM6AO15550 1401 aaPredicted RBP23.36■■□□□ 1.33
PRKCSH-209ENST00000589838 CPDO75976 1380 aa23.36■■□□□ 1.33
PRKCSH-209ENST00000589838 TTC41PQ6P2S7 1318 aa23.36■■□□□ 1.33
PRKCSH-209ENST00000589838 DDX17Q92841 729 aaKnown RBP23.36■■□□□ 1.33
PRKCSH-209ENST00000589838 UTYO14607 1347 aa23.35■■□□□ 1.33
PRKCSH-209ENST00000589838 USP42Q9H9J4 1324 aaKnown RBP23.35■■□□□ 1.33
PRKCSH-209ENST00000589838 LARP1Q6PKG0 1096 aaKnown RBP23.35■■□□□ 1.33
PRKCSH-209ENST00000589838 CNTROBQ8N137 903 aa23.35■■□□□ 1.33
PRKCSH-209ENST00000589838 ANO2Q9NQ90 1003 aa23.35■■□□□ 1.33
PRKCSH-209ENST00000589838 PRAMEF22A3QJZ6 481 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 CLASRPQ8N2M8 674 aaKnown RBP23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 PI4K2BQ8TCG2 481 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 MEGF6O75095 1541 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 GRM8O00222 908 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 PDIA6Q15084 440 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 NFATC2IPQ8NCF5 419 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 IL17RAQ96F46 866 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 GPATCH3Q96I76 525 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 PKD1L3Q7Z443 1732 aa23.34■■□□□ 1.33
PRKCSH-209ENST00000589838 NEXNQ0ZGT2 675 aa23.33■■□□□ 1.33
PRKCSH-209ENST00000589838 RIC3Q7Z5B4 369 aa23.33■■□□□ 1.33
PRKCSH-209ENST00000589838 GOLGA6L3A6NEY3 463 aa23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 UNC5CLQ8IV45 518 aa23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 TTC5Q8N0Z6 440 aa23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 MRC1P22897 1456 aa23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 C5P01031 1676 aa23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 GLRX3O76003 335 aaKnown RBP23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 SLC39A6Q13433 755 aa23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 CWF19L2Q2TBE0 894 aaKnown RBP23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 CABLES1Q8TDN4 633 aa23.32■■□□□ 1.32
PRKCSH-209ENST00000589838 SNRPA1P09661 255 aaKnown RBP23.31■■□□□ 1.32
PRKCSH-209ENST00000589838 SSFA2P28290 1259 aa23.31■■□□□ 1.32
PRKCSH-209ENST00000589838 NEK4P51957 841 aa23.31■■□□□ 1.32
PRKCSH-209ENST00000589838 AIMP1Q12904 312 aaKnown RBP23.31■■□□□ 1.32
PRKCSH-209ENST00000589838 ISY1Q9ULR0 285 aaKnown RBP23.31■■□□□ 1.32
PRKCSH-209ENST00000589838 CHRNA2Q15822 529 aa23.3■■□□□ 1.32
PRKCSH-209ENST00000589838 FMNL2Q96PY5 1086 aa23.29■■□□□ 1.32
PRKCSH-209ENST00000589838 GZF1Q9H116 711 aaPredicted RBP23.28■■□□□ 1.32
PRKCSH-209ENST00000589838 BRPF3Q9ULD4 1205 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms