RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 FCHSD2O94868 740 aa16.36■□□□□ 0.21
VAT1-206ENST00000589709 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
VAT1-206ENST00000589709 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
VAT1-206ENST00000589709 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
VAT1-206ENST00000589709 KIAA1551Q9HCM1 1747 aa16.36■□□□□ 0.21
VAT1-206ENST00000589709 POLRMTO00411 1230 aaKnown RBP16.35■□□□□ 0.21
VAT1-206ENST00000589709 KCNA3P22001 575 aa16.35■□□□□ 0.21
VAT1-206ENST00000589709 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
VAT1-206ENST00000589709 COL15A1P39059 1388 aa16.35■□□□□ 0.21
VAT1-206ENST00000589709 UBR2Q8IWV8 1755 aa16.34■□□□□ 0.21
VAT1-206ENST00000589709 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
VAT1-206ENST00000589709 EIF5P55010 431 aaKnown RBP16.34■□□□□ 0.21
VAT1-206ENST00000589709 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.21
VAT1-206ENST00000589709 GPBP1L1Q9HC44 474 aaPredicted RBP16.34■□□□□ 0.21
VAT1-206ENST00000589709 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
VAT1-206ENST00000589709 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
VAT1-206ENST00000589709 A0A087WZG4 1122 aa16.33■□□□□ 0.2
VAT1-206ENST00000589709 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
VAT1-206ENST00000589709 NFIXQ14938 502 aa16.33■□□□□ 0.2
VAT1-206ENST00000589709 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.2
VAT1-206ENST00000589709 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
VAT1-206ENST00000589709 N4BP2Q86UW6 1770 aaPredicted RBP16.32■□□□□ 0.2
VAT1-206ENST00000589709 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
VAT1-206ENST00000589709 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
VAT1-206ENST00000589709 HTATSF1O43719 755 aaKnown RBP16.31■□□□□ 0.2
VAT1-206ENST00000589709 DALRD3Q5D0E6 543 aaKnown RBP16.31■□□□□ 0.2
VAT1-206ENST00000589709 ARHGAP27Q6ZUM4 889 aa16.31■□□□□ 0.2
VAT1-206ENST00000589709 IL6STP40189 918 aaPredicted RBP16.3■□□□□ 0.2
VAT1-206ENST00000589709 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
VAT1-206ENST00000589709 SIPA1L3O60292 1781 aaPredicted RBP16.3■□□□□ 0.2
VAT1-206ENST00000589709 SERPINB2P05120 415 aa16.29■□□□□ 0.2
VAT1-206ENST00000589709 KCNQ3O43525 872 aa16.28■□□□□ 0.2
VAT1-206ENST00000589709 CHRNA5P30532 468 aa16.28■□□□□ 0.2
VAT1-206ENST00000589709 BRCA1P38398 1863 aaKnown RBP16.28■□□□□ 0.2
VAT1-206ENST00000589709 MCM10Q7L590 875 aa16.27■□□□□ 0.2
VAT1-206ENST00000589709 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.2
VAT1-206ENST00000589709 A1BGP04217 495 aa16.26■□□□□ 0.19
VAT1-206ENST00000589709 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
VAT1-206ENST00000589709 ARFGEF1Q9Y6D6 1849 aa16.25■□□□□ 0.19
VAT1-206ENST00000589709 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
VAT1-206ENST00000589709 NPM2Q86SE8 214 aaKnown RBP16.25■□□□□ 0.19
VAT1-206ENST00000589709 TBC1D2BQ9UPU7 963 aa16.25■□□□□ 0.19
VAT1-206ENST00000589709 USP16Q9Y5T5 823 aa16.25■□□□□ 0.19
VAT1-206ENST00000589709 KIF3CO14782 793 aa16.24■□□□□ 0.19
VAT1-206ENST00000589709 NEFMP07197 916 aa16.24■□□□□ 0.19
VAT1-206ENST00000589709 TAF7Q15545 349 aaPredicted RBP16.24■□□□□ 0.19
VAT1-206ENST00000589709 TBC1D9BQ66K14 1250 aa16.24■□□□□ 0.19
VAT1-206ENST00000589709 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
VAT1-206ENST00000589709 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
VAT1-206ENST00000589709 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
VAT1-206ENST00000589709 C9orf131Q5VYM1 1079 aa16.23■□□□□ 0.19
VAT1-206ENST00000589709 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
VAT1-206ENST00000589709 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
VAT1-206ENST00000589709 AFDNP55196 1824 aaKnown RBP16.22■□□□□ 0.19
VAT1-206ENST00000589709 H0YIN7 160 aa16.22■□□□□ 0.19
VAT1-206ENST00000589709 C2CD5Q86YS7 1000 aa16.22■□□□□ 0.19
VAT1-206ENST00000589709 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
VAT1-206ENST00000589709 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
VAT1-206ENST00000589709 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
VAT1-206ENST00000589709 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
VAT1-206ENST00000589709 RGL2O15211 777 aa16.21■□□□□ 0.19
VAT1-206ENST00000589709 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
VAT1-206ENST00000589709 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
VAT1-206ENST00000589709 CARMIL3Q8ND23 1372 aa16.21■□□□□ 0.19
VAT1-206ENST00000589709 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
VAT1-206ENST00000589709 PDE6BP35913 854 aa16.2■□□□□ 0.18
VAT1-206ENST00000589709 RALBP1Q15311 655 aa16.2■□□□□ 0.18
VAT1-206ENST00000589709 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
VAT1-206ENST00000589709 DZIP3Q86Y13 1208 aaKnown RBP16.2■□□□□ 0.18
VAT1-206ENST00000589709 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
VAT1-206ENST00000589709 HSPA6P17066 643 aa16.19■□□□□ 0.18
VAT1-206ENST00000589709 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
VAT1-206ENST00000589709 SCN7AQ01118 1682 aa16.18■□□□□ 0.18
VAT1-206ENST00000589709 NBPF26B4DH59 902 aa16.18■□□□□ 0.18
VAT1-206ENST00000589709 TOMM70O94826 608 aa16.18■□□□□ 0.18
VAT1-206ENST00000589709 NBPF10Q6P3W6 841 aaKnown RBP16.18■□□□□ 0.18
VAT1-206ENST00000589709 NBPF15Q8N660 670 aa16.18■□□□□ 0.18
VAT1-206ENST00000589709 RNF181Q9P0P0 153 aa16.18■□□□□ 0.18
VAT1-206ENST00000589709 ZC3H4Q9UPT8 1303 aaKnown RBP16.18■□□□□ 0.18
VAT1-206ENST00000589709 CNBD1Q8NA66 436 aa16.17■□□□□ 0.18
VAT1-206ENST00000589709 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
VAT1-206ENST00000589709 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
VAT1-206ENST00000589709 ZNF652Q9Y2D9 606 aa16.17■□□□□ 0.18
VAT1-206ENST00000589709 LMNB1P20700 586 aa16.16■□□□□ 0.18
VAT1-206ENST00000589709 PIP4K2AP48426 406 aaPredicted RBP16.16■□□□□ 0.18
VAT1-206ENST00000589709 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
VAT1-206ENST00000589709 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
VAT1-206ENST00000589709 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
VAT1-206ENST00000589709 ZNF622Q969S3 477 aaKnown RBP eCLIP16.15■□□□□ 0.18
VAT1-206ENST00000589709 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
VAT1-206ENST00000589709 ST5P78524 1137 aa16.14■□□□□ 0.17
VAT1-206ENST00000589709 STYK1Q6J9G0 422 aa16.14■□□□□ 0.17
VAT1-206ENST00000589709 CCDC24Q8N4L8 307 aa16.14■□□□□ 0.17
VAT1-206ENST00000589709 CNKSR1Q969H4 720 aa16.14■□□□□ 0.17
VAT1-206ENST00000589709 SBF1O95248 1867 aa16.14■□□□□ 0.17
VAT1-206ENST00000589709 CEP350Q5VT06 3117 aa16.13■□□□□ 0.17
VAT1-206ENST00000589709 NFKBIEO00221 500 aa16.13■□□□□ 0.17
VAT1-206ENST00000589709 NPHP1O15259 732 aa16.13■□□□□ 0.17
VAT1-206ENST00000589709 SRGNP10124 158 aa16.13■□□□□ 0.17
VAT1-206ENST00000589709 RASSF7Q02833 373 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms