RNA–Protein interactions for RNA: ENST00000589686.5

CIRBP-224, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-224	ENST00000589686	WDR43	Q15061	677 aa	Known RBP eCLIP	27.78	■■■□□ 2.04
CIRBP-224	ENST00000589686	DLG5	Q8TDM6	1919 aa		27.77	■■■□□ 2.04
CIRBP-224	ENST00000589686	ZPR1	O75312	459 aa		27.76	■■■□□ 2.03
CIRBP-224	ENST00000589686	SRP68	Q9UHB9	627 aa	Known RBP	27.76	■■■□□ 2.03
CIRBP-224	ENST00000589686	CANX	P27824	592 aa	Known RBP	27.75	■■■□□ 2.03
CIRBP-224	ENST00000589686	GPR162	Q16538	588 aa		27.75	■■■□□ 2.03
CIRBP-224	ENST00000589686	PNISR	Q8TF01	805 aa	Known RBP	27.75	■■■□□ 2.03
CIRBP-224	ENST00000589686	COL15A1	P39059	1388 aa		27.74	■■■□□ 2.03
CIRBP-224	ENST00000589686	SNRPA1	P09661	255 aa	Known RBP	27.72	■■■□□ 2.03
CIRBP-224	ENST00000589686	RIPK4	P57078	832 aa		27.72	■■■□□ 2.03
CIRBP-224	ENST00000589686	FKBP8	Q14318	412 aa		27.72	■■■□□ 2.03
CIRBP-224	ENST00000589686	NARF	Q9UHQ1	456 aa		27.72	■■■□□ 2.03
CIRBP-224	ENST00000589686	PARP3	Q9Y6F1	533 aa		27.72	■■■□□ 2.03
CIRBP-224	ENST00000589686	TMPO	P42166	694 aa	Known RBP	27.71	■■■□□ 2.03
CIRBP-224	ENST00000589686	EIF5	P55010	431 aa	Known RBP	27.71	■■■□□ 2.03
CIRBP-224	ENST00000589686	USPL1	Q5W0Q7	1092 aa		27.71	■■■□□ 2.03
CIRBP-224	ENST00000589686	ADAMTS8	Q9UP79	889 aa		27.71	■■■□□ 2.03
CIRBP-224	ENST00000589686		A0A087WZG4	1122 aa		27.7	■■■□□ 2.02
CIRBP-224	ENST00000589686	LMOD3	Q0VAK6	560 aa		27.7	■■■□□ 2.02
CIRBP-224	ENST00000589686	PELP1	Q8IZL8	1130 aa	Known RBP	27.7	■■■□□ 2.02
CIRBP-224	ENST00000589686	RUNDC1	Q96C34	613 aa		27.7	■■■□□ 2.02
CIRBP-224	ENST00000589686	THUMPD2	Q9BTF0	503 aa	Known RBP	27.7	■■■□□ 2.02
CIRBP-224	ENST00000589686	MIS18A	Q9NYP9	233 aa		27.7	■■■□□ 2.02
CIRBP-224	ENST00000589686	CCDC146	Q8IYE0	955 aa		27.69	■■■□□ 2.02
CIRBP-224	ENST00000589686	A1BG	P04217	495 aa		27.68	■■■□□ 2.02
CIRBP-224	ENST00000589686	YY1	P25490	414 aa		27.68	■■■□□ 2.02
CIRBP-224	ENST00000589686	IL6ST	P40189	918 aa	Predicted RBP	27.68	■■■□□ 2.02
CIRBP-224	ENST00000589686	USP16	Q9Y5T5	823 aa		27.68	■■■□□ 2.02
CIRBP-224	ENST00000589686	NPM2	Q86SE8	214 aa	Known RBP	27.67	■■■□□ 2.02
CIRBP-224	ENST00000589686	TM4SF1	P30408	202 aa		27.66	■■■□□ 2.02
CIRBP-224	ENST00000589686	PRAMEF22	A3QJZ6	481 aa		27.65	■■■□□ 2.02
CIRBP-224	ENST00000589686	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.65	■■■□□ 2.02
CIRBP-224	ENST00000589686	DDR1	Q08345	913 aa		27.64	■■■□□ 2.02
CIRBP-224	ENST00000589686	RRP7A	Q9Y3A4	280 aa	Known RBP	27.64	■■■□□ 2.02
CIRBP-224	ENST00000589686	C10orf71	Q711Q0	1435 aa		27.64	■■■□□ 2.02
CIRBP-224	ENST00000589686	GRIN3B	O60391	1043 aa		27.63	■■■□□ 2.01
CIRBP-224	ENST00000589686	TGFB2	P61812	414 aa		27.63	■■■□□ 2.01
CIRBP-224	ENST00000589686	NEUROD2	Q15784	382 aa		27.63	■■■□□ 2.01
CIRBP-224	ENST00000589686	KDM3B	Q7LBC6	1761 aa		27.63	■■■□□ 2.01
CIRBP-224	ENST00000589686	POLRMT	O00411	1230 aa	Known RBP	27.62	■■■□□ 2.01
CIRBP-224	ENST00000589686	YBX3	P16989	372 aa	Known RBP eCLIP	27.62	■■■□□ 2.01
CIRBP-224	ENST00000589686	BCL2L12	Q9HB09	334 aa		27.62	■■■□□ 2.01
CIRBP-224	ENST00000589686	KIF13B	Q9NQT8	1826 aa		27.62	■■■□□ 2.01
CIRBP-224	ENST00000589686	GOLGB1	Q14789	3259 aa	Known RBP	27.61	■■■□□ 2.01
CIRBP-224	ENST00000589686	EIF4A1	P60842	406 aa	Known RBP	27.61	■■■□□ 2.01
CIRBP-224	ENST00000589686	NFIX	Q14938	502 aa		27.61	■■■□□ 2.01
CIRBP-224	ENST00000589686	BABAM1	Q9NWV8	329 aa		27.61	■■■□□ 2.01
CIRBP-224	ENST00000589686	TBC1D2B	Q9UPU7	963 aa		27.61	■■■□□ 2.01
CIRBP-224	ENST00000589686	TSPYL4	Q9UJ04	414 aa		27.6	■■■□□ 2.01
CIRBP-224	ENST00000589686	UTRN	P46939	3433 aa		27.6	■■■□□ 2.01
CIRBP-224	ENST00000589686	ANP32C	O43423	234 aa		27.59	■■■□□ 2.01
CIRBP-224	ENST00000589686	GIGYF1	O75420	1035 aa	Predicted RBP	27.59	■■■□□ 2.01
CIRBP-224	ENST00000589686	PXDNL	A1KZ92	1463 aa		27.58	■■■□□ 2.01
CIRBP-224	ENST00000589686	PIP4K2A	P48426	406 aa	Predicted RBP	27.57	■■■□□ 2
CIRBP-224	ENST00000589686	TRIM35	Q9UPQ4	493 aa		27.57	■■■□□ 2
CIRBP-224	ENST00000589686	DZIP3	Q86Y13	1208 aa	Known RBP	27.56	■■■□□ 2
CIRBP-224	ENST00000589686	CHD4	Q14839	1912 aa		27.56	■■■□□ 2
CIRBP-224	ENST00000589686		A0A0G2JLW4	131 aa		27.55	■■■□□ 2
CIRBP-224	ENST00000589686	NBPF26	B4DH59	902 aa		27.55	■■■□□ 2
CIRBP-224	ENST00000589686	NBPF10	Q6P3W6	841 aa	Known RBP	27.55	■■■□□ 2
CIRBP-224	ENST00000589686	NBPF15	Q8N660	670 aa		27.55	■■■□□ 2
CIRBP-224	ENST00000589686	CAMTA2	O94983	1202 aa		27.54	■■■□□ 2
CIRBP-224	ENST00000589686	SERPINB2	P05120	415 aa		27.54	■■■□□ 2
CIRBP-224	ENST00000589686	LAMB4	A4D0S4	1761 aa		27.53	■■■□□ 2
CIRBP-224	ENST00000589686	SCN7A	Q01118	1682 aa		27.53	■■■□□ 2
CIRBP-224	ENST00000589686	DPEP1	P16444	411 aa		27.53	■■■□□ 2
CIRBP-224	ENST00000589686	CCDC184	Q52MB2	194 aa		27.53	■■■□□ 2
CIRBP-224	ENST00000589686	TBC1D9B	Q66K14	1250 aa		27.53	■■■□□ 2
CIRBP-224	ENST00000589686	BICDL1	Q6ZP65	573 aa		27.53	■■■□□ 2
CIRBP-224	ENST00000589686	WWC3	Q9ULE0	1092 aa		27.53	■■■□□ 2
CIRBP-224	ENST00000589686	KIAA1551	Q9HCM1	1747 aa		27.53	■■■□□ 2
CIRBP-224	ENST00000589686	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.51	■■□□□ 1.99
CIRBP-224	ENST00000589686	APAF1	O14727	1248 aa		27.51	■■□□□ 1.99
CIRBP-224	ENST00000589686	CHL1	O00533	1208 aa		27.5	■■□□□ 1.99
CIRBP-224	ENST00000589686	CLEC4G	Q6UXB4	293 aa		27.5	■■□□□ 1.99
CIRBP-224	ENST00000589686	SETDB2	Q96T68	719 aa		27.49	■■□□□ 1.99
CIRBP-224	ENST00000589686	ZNF652	Q9Y2D9	606 aa		27.49	■■□□□ 1.99
CIRBP-224	ENST00000589686	NRXN2	Q9P2S2	1712 aa		27.49	■■□□□ 1.99
CIRBP-224	ENST00000589686	CARMIL3	Q8ND23	1372 aa		27.48	■■□□□ 1.99
CIRBP-224	ENST00000589686	AFDN	P55196	1824 aa	Known RBP	27.48	■■□□□ 1.99
CIRBP-224	ENST00000589686	RGL2	O15211	777 aa		27.48	■■□□□ 1.99
CIRBP-224	ENST00000589686	KCNA3	P22001	575 aa		27.48	■■□□□ 1.99
CIRBP-224	ENST00000589686	LAS1L	Q9Y4W2	734 aa	Known RBP	27.48	■■□□□ 1.99
CIRBP-224	ENST00000589686	MRS2	Q9HD23	443 aa		27.47	■■□□□ 1.99
CIRBP-224	ENST00000589686	PIM2	Q9P1W9	311 aa		27.47	■■□□□ 1.99
CIRBP-224	ENST00000589686	BCS1L	Q9Y276	419 aa		27.47	■■□□□ 1.99
CIRBP-224	ENST00000589686	BCOR	Q6W2J9	1755 aa		27.47	■■□□□ 1.99
CIRBP-224	ENST00000589686	ERBB4	Q15303	1308 aa		27.46	■■□□□ 1.99
CIRBP-224	ENST00000589686	CHRNA5	P30532	468 aa		27.44	■■□□□ 1.98
CIRBP-224	ENST00000589686	CALD1	Q05682	793 aa	Known RBP	27.44	■■□□□ 1.98
CIRBP-224	ENST00000589686	CFAP44	Q96MT7	982 aa		27.44	■■□□□ 1.98
CIRBP-224	ENST00000589686	MYL6B	P14649	208 aa		27.43	■■□□□ 1.98
CIRBP-224	ENST00000589686	NGEF	Q8N5V2	710 aa		27.43	■■□□□ 1.98
CIRBP-224	ENST00000589686	EIF2S2	P20042	333 aa	Known RBP	27.42	■■□□□ 1.98
CIRBP-224	ENST00000589686	BRCA1	P38398	1863 aa	Known RBP	27.41	■■□□□ 1.98
CIRBP-224	ENST00000589686	DALRD3	Q5D0E6	543 aa	Known RBP	27.41	■■□□□ 1.98
CIRBP-224	ENST00000589686	PRR5L	Q6MZQ0	368 aa		27.41	■■□□□ 1.98
CIRBP-224	ENST00000589686	ZNF784	Q8NCA9	323 aa	Predicted RBP	27.41	■■□□□ 1.98
CIRBP-224	ENST00000589686	ERVV-1	B6SEH8	477 aa		27.4	■■□□□ 1.98
CIRBP-224	ENST00000589686	NPHP1	O15259	732 aa		27.4	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 249.1 ms